FFCP PHASE1:Hg19::chr9:140033563..140033579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2902 | |EntrezGene=2902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4584 | |HGNC=4584 | ||
|TSSclassifier=strong | |||
|UniProt=Q05586,Q59GW0,Q5VSF5,Q9UPF8,Q5VSF4,Q9UPF9,A2AVK2 | |UniProt=Q05586,Q59GW0,Q5VSF5,Q9UPF8,Q5VSF4,Q9UPF9,A2AVK2 | ||
|association_with_transcript=-29bp_to_NM_000832,NM_001185090,NM_001185091,NM_007327,NM_021569,uc004cli.1,uc004clj.1,uc004clk.2,uc004cll.2,uc004clm.2,uc004cln.2,uc004clo.2_5end | |association_with_transcript=-29bp_to_NM_000832,NM_001185090,NM_001185091,NM_007327,NM_021569,uc004cli.1,uc004clj.1,uc004clk.2,uc004cll.2,uc004clm.2,uc004cln.2,uc004clo.2_5end | ||
|cluster_id=chr9:140033563..140033579,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRIN1_5end | |description=CAGE_peak_2_at_GRIN1_5end | ||
|id=chr9:140033563..140033579,+ | |id=chr9:140033563..140033579,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.30e-23;82!UBERON:0006215;3.89e-11;3!UBERON:0006241;2.74e-10;3!UBERON:0003057;2.74e-10;3!UBERON:0010122;1.19e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.17e-111!57;UBERON:0005068!2.17e-111!57;UBERON:0006241!2.17e-111!57;UBERON:0007135!2.17e-111!57;UBERON:0001017!1.31e-97!82;UBERON:0005743!4.79e-96!86;UBERON:0000073!6.16e-96!94;UBERON:0001016!6.16e-96!94;UBERON:0002616!6.03e-94!59;UBERON:0000955!2.83e-89!69;UBERON:0006238!2.83e-89!69;UBERON:0002780!1.78e-88!41;UBERON:0001890!1.78e-88!41;UBERON:0006240!1.78e-88!41;UBERON:0003080!3.58e-86!42;UBERON:0003075!1.76e-79!86;UBERON:0007284!1.76e-79!86;UBERON:0001893!5.12e-76!34;UBERON:0002020!5.68e-76!34;UBERON:0003528!5.68e-76!34;UBERON:0002346!2.11e-75!90;UBERON:0002791!3.58e-73!33;UBERON:0001869!2.42e-71!32;UBERON:0007023!6.09e-62!115;UBERON:0003056!9.60e-60!61;UBERON:0002619!3.23e-59!22;UBERON:0001950!8.84e-54!20;UBERON:0000956!1.24e-51!25;UBERON:0000203!1.24e-51!25;UBERON:0004121!8.96e-50!169;UBERON:0000033!1.44e-49!123;UBERON:0000924!2.57e-48!173;UBERON:0006601!2.57e-48!173;UBERON:0000153!1.07e-46!129;UBERON:0007811!1.07e-46!129;UBERON:0000025!5.59e-28!194;UBERON:0002420!4.16e-26!9;UBERON:0007245!4.16e-26!9;UBERON:0010009!4.16e-26!9;UBERON:0010011!4.16e-26!9;UBERON:0000454!4.16e-26!9;UBERON:0002308!1.37e-25!9;UBERON:0000125!1.37e-25!9;UBERON:0003076!7.58e-25!15;UBERON:0003057!7.58e-25!15;UBERON:0009663!1.49e-20!7;UBERON:0004111!5.10e-20!241;UBERON:0000200!2.14e-18!6;UBERON:0001871!4.10e-18!7;UBERON:0004733!6.44e-18!12;UBERON:0002028!6.44e-18!12;UBERON:0007277!6.44e-18!12;UBERON:0000477!1.13e-16!286;UBERON:0004732!2.12e-16!13;UBERON:0002298!3.34e-16!8;UBERON:0000483!3.80e-16!309;UBERON:0000119!7.31e-16!312;UBERON:0000349!1.69e-15!5;UBERON:0002021!3.03e-15!5;UBERON:0001872!3.41e-15!5;UBERON:0000369!1.74e-13!4;UBERON:0002435!1.74e-13!4;UBERON:0000204!1.74e-13!4;UBERON:0010082!1.74e-13!4;UBERON:0001894!1.84e-13!7;UBERON:0006222!1.84e-13!7;UBERON:0000064!5.12e-13!219;UBERON:0000475!1.64e-12!365;UBERON:0002680!2.65e-11!9;UBERON:0001895!2.65e-11!9;UBERON:0010092!2.65e-11!9;UBERON:0005383!1.44e-10!3;UBERON:0005382!1.44e-10!3;UBERON:0002771!6.31e-10!3;UBERON:0000988!2.28e-09!3;UBERON:0002240!5.80e-09!3;UBERON:0001896!7.04e-09!3;UBERON:0005290!7.04e-09!3;UBERON:0010096!7.04e-09!3;UBERON:0006331!7.24e-09!3;UBERON:0000062!3.42e-08!511;UBERON:0000922!4.29e-08!612;UBERON:0000923!8.44e-08!604;UBERON:0005291!8.44e-08!604;UBERON:0006598!8.44e-08!604;UBERON:0002532!8.44e-08!604;UBERON:0002050!9.22e-08!605;UBERON:0005423!9.22e-08!605;UBERON:0000467!1.33e-07!625;UBERON:0001873!1.44e-07!2;UBERON:0010122!1.44e-07!2;UBERON:0000480!1.45e-07!626;UBERON:0000481!1.62e-07!347;UBERON:0001870!2.50e-07!2;UBERON:0001876!3.00e-07!2;UBERON:0001954!5.29e-07!2;UBERON:0003022!5.29e-07!2;UBERON:0002421!5.29e-07!2;UBERON:0002600!5.29e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!2.17e-111!57;UBERON:0005068!2.17e-111!57;UBERON:0006241!2.17e-111!57;UBERON:0007135!2.17e-111!57;UBERON:0001017!1.31e-97!82;UBERON:0005743!4.79e-96!86;UBERON:0000073!6.16e-96!94;UBERON:0001016!6.16e-96!94;UBERON:0002616!6.03e-94!59;UBERON:0000955!2.83e-89!69;UBERON:0006238!2.83e-89!69;UBERON:0002780!1.78e-88!41;UBERON:0001890!1.78e-88!41;UBERON:0006240!1.78e-88!41;UBERON:0003080!3.58e-86!42;UBERON:0003075!1.76e-79!86;UBERON:0007284!1.76e-79!86;UBERON:0001893!5.12e-76!34;UBERON:0002020!5.68e-76!34;UBERON:0003528!5.68e-76!34;UBERON:0002346!2.11e-75!90;UBERON:0002791!3.58e-73!33;UBERON:0001869!2.42e-71!32;UBERON:0007023!6.09e-62!115;UBERON:0003056!9.60e-60!61;UBERON:0002619!3.23e-59!22;UBERON:0001950!8.84e-54!20;UBERON:0000956!1.24e-51!25;UBERON:0000203!1.24e-51!25;UBERON:0004121!8.96e-50!169;UBERON:0000033!1.44e-49!123;UBERON:0000924!2.57e-48!173;UBERON:0006601!2.57e-48!173;UBERON:0000153!1.07e-46!129;UBERON:0007811!1.07e-46!129;UBERON:0000025!5.59e-28!194;UBERON:0002420!4.16e-26!9;UBERON:0007245!4.16e-26!9;UBERON:0010009!4.16e-26!9;UBERON:0010011!4.16e-26!9;UBERON:0000454!4.16e-26!9;UBERON:0002308!1.37e-25!9;UBERON:0000125!1.37e-25!9;UBERON:0003076!7.58e-25!15;UBERON:0003057!7.58e-25!15;UBERON:0009663!1.49e-20!7;UBERON:0004111!5.10e-20!241;UBERON:0000200!2.14e-18!6;UBERON:0001871!4.10e-18!7;UBERON:0004733!6.44e-18!12;UBERON:0002028!6.44e-18!12;UBERON:0007277!6.44e-18!12;UBERON:0000477!1.13e-16!286;UBERON:0004732!2.12e-16!13;UBERON:0002298!3.34e-16!8;UBERON:0000483!3.80e-16!309;UBERON:0000119!7.31e-16!312;UBERON:0000349!1.69e-15!5;UBERON:0002021!3.03e-15!5;UBERON:0001872!3.41e-15!5;UBERON:0000369!1.74e-13!4;UBERON:0002435!1.74e-13!4;UBERON:0000204!1.74e-13!4;UBERON:0010082!1.74e-13!4;UBERON:0001894!1.84e-13!7;UBERON:0006222!1.84e-13!7;UBERON:0000064!5.12e-13!219;UBERON:0000475!1.64e-12!365;UBERON:0002680!2.65e-11!9;UBERON:0001895!2.65e-11!9;UBERON:0010092!2.65e-11!9;UBERON:0005383!1.44e-10!3;UBERON:0005382!1.44e-10!3;UBERON:0002771!6.31e-10!3;UBERON:0000988!2.28e-09!3;UBERON:0002240!5.80e-09!3;UBERON:0001896!7.04e-09!3;UBERON:0005290!7.04e-09!3;UBERON:0010096!7.04e-09!3;UBERON:0006331!7.24e-09!3;UBERON:0000062!3.42e-08!511;UBERON:0000922!4.29e-08!612;UBERON:0000923!8.44e-08!604;UBERON:0005291!8.44e-08!604;UBERON:0006598!8.44e-08!604;UBERON:0002532!8.44e-08!604;UBERON:0002050!9.22e-08!605;UBERON:0005423!9.22e-08!605;UBERON:0000467!1.33e-07!625;UBERON:0001873!1.44e-07!2;UBERON:0010122!1.44e-07!2;UBERON:0000480!1.45e-07!626;UBERON:0000481!1.62e-07!347;UBERON:0001870!2.50e-07!2;UBERON:0001876!3.00e-07!2;UBERON:0001954!5.29e-07!2;UBERON:0003022!5.29e-07!2;UBERON:0002421!5.29e-07!2;UBERON:0002600!5.29e-07!2 | ||
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|short_description=p2@GRIN1 | |short_description=p2@GRIN1 | ||
}} | }} |
Latest revision as of 15:54, 16 September 2015
Short description: | p2@GRIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -29bp_to_NM_000832, NM_001185090, NM_001185091, NM_007327, NM_021569, uc004cli.1, uc004clj.1, uc004clk.2, uc004cll.2, uc004clm.2, uc004cln.2, uc004clo.2_5end |
EntrezGene: | GRIN1 |
HGNC: | 4584 |
UniProt: | Q05586Q59GW0Q5VSF5Q9UPF8Q5VSF4Q9UPF9A2AVK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data