FFCP PHASE1:Hg19::chr5:20575959..20575997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1016 | |EntrezGene=1016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1757 | |HGNC=1757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000507632,ENST00000507958,ENST00000542864_5end | |association_with_transcript=0bp_to_ENST00000507632,ENST00000507958,ENST00000542864_5end | ||
|cluster_id=chr5:20575959..20575997,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_CDH18_5end | |description=CAGE_peak_3_at_CDH18_5end | ||
|id=chr5:20575959..20575997,- | |id=chr5:20575959..20575997,- | ||
|ontology_enrichment_celltype=CL:0000064!7.54e-07!3;CL:0005012!7.54e-07!3;CL:0000067!7.54e-07!3;CL:0002304!7.54e-07!3 | |ontology_enrichment_celltype=CL:0000064!7.54e-07!3;CL:0005012!7.54e-07!3;CL:0000067!7.54e-07!3;CL:0002304!7.54e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.48e-18;82!UBERON:0006215;5.66e-14;3!UBERON:0006241;9.30e-13;3!UBERON:0003057;9.30e-13;3!UBERON:0010122;2.01e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.55e-85!57;UBERON:0005068!2.55e-85!57;UBERON:0006241!2.55e-85!57;UBERON:0007135!2.55e-85!57;UBERON:0003075!4.92e-76!86;UBERON:0007284!4.92e-76!86;UBERON:0002346!5.65e-72!90;UBERON:0002616!6.87e-71!59;UBERON:0001017!1.08e-67!82;UBERON:0005743!6.69e-67!86;UBERON:0000955!1.50e-66!69;UBERON:0006238!1.50e-66!69;UBERON:0002780!1.88e-64!41;UBERON:0001890!1.88e-64!41;UBERON:0006240!1.88e-64!41;UBERON:0002020!7.30e-63!34;UBERON:0003528!7.30e-63!34;UBERON:0003080!1.08e-62!42;UBERON:0001869!2.35e-62!32;UBERON:0001893!5.41e-62!34;UBERON:0000073!1.55e-61!94;UBERON:0001016!1.55e-61!94;UBERON:0002791!7.60e-60!33;UBERON:0003056!4.56e-56!61;UBERON:0000956!1.26e-47!25;UBERON:0000203!1.26e-47!25;UBERON:0002619!2.24e-46!22;UBERON:0000033!6.73e-44!123;UBERON:0000153!5.85e-43!129;UBERON:0007811!5.85e-43!129;UBERON:0001950!3.15e-42!20;UBERON:0004121!2.67e-39!169;UBERON:0000924!5.10e-38!173;UBERON:0006601!5.10e-38!173;UBERON:0007023!8.07e-36!115;UBERON:0003076!1.58e-22!15;UBERON:0003057!1.58e-22!15;UBERON:0000025!1.49e-16!194;UBERON:0002420!2.47e-16!9;UBERON:0007245!2.47e-16!9;UBERON:0010009!2.47e-16!9;UBERON:0010011!2.47e-16!9;UBERON:0000454!2.47e-16!9;UBERON:0004733!2.49e-16!12;UBERON:0002028!2.49e-16!12;UBERON:0007277!2.49e-16!12;UBERON:0002308!2.57e-16!9;UBERON:0000125!2.57e-16!9;UBERON:0001871!6.34e-15!7;UBERON:0004732!6.59e-15!13;UBERON:0000200!8.95e-15!6;UBERON:0000064!9.09e-14!219;UBERON:0000483!1.27e-13!309;UBERON:0000119!2.43e-13!312;UBERON:0000349!1.90e-12!5;UBERON:0000475!3.06e-12!365;UBERON:0001872!3.26e-12!5;UBERON:0002021!4.41e-12!5;UBERON:0009663!8.59e-12!7;UBERON:0002298!3.12e-11!8;UBERON:0004111!7.43e-11!241;UBERON:0000477!9.44e-11!286;UBERON:0002680!2.68e-10!9;UBERON:0001895!2.68e-10!9;UBERON:0010092!2.68e-10!9;UBERON:0000369!1.05e-09!4;UBERON:0002435!1.05e-09!4;UBERON:0000204!1.05e-09!4;UBERON:0010082!1.05e-09!4;UBERON:0000988!1.01e-08!3;UBERON:0000488!1.22e-08!4;UBERON:0002771!1.81e-08!3;UBERON:0001896!2.94e-08!3;UBERON:0005290!2.94e-08!3;UBERON:0010096!2.94e-08!3;UBERON:0000062!3.23e-08!511;UBERON:0002240!3.56e-08!3;UBERON:0005383!1.07e-07!3;UBERON:0005382!1.07e-07!3;UBERON:0000481!2.16e-07!347;UBERON:0001778!7.54e-07!3;UBERON:0001775!7.54e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.55e-85!57;UBERON:0005068!2.55e-85!57;UBERON:0006241!2.55e-85!57;UBERON:0007135!2.55e-85!57;UBERON:0003075!4.92e-76!86;UBERON:0007284!4.92e-76!86;UBERON:0002346!5.65e-72!90;UBERON:0002616!6.87e-71!59;UBERON:0001017!1.08e-67!82;UBERON:0005743!6.69e-67!86;UBERON:0000955!1.50e-66!69;UBERON:0006238!1.50e-66!69;UBERON:0002780!1.88e-64!41;UBERON:0001890!1.88e-64!41;UBERON:0006240!1.88e-64!41;UBERON:0002020!7.30e-63!34;UBERON:0003528!7.30e-63!34;UBERON:0003080!1.08e-62!42;UBERON:0001869!2.35e-62!32;UBERON:0001893!5.41e-62!34;UBERON:0000073!1.55e-61!94;UBERON:0001016!1.55e-61!94;UBERON:0002791!7.60e-60!33;UBERON:0003056!4.56e-56!61;UBERON:0000956!1.26e-47!25;UBERON:0000203!1.26e-47!25;UBERON:0002619!2.24e-46!22;UBERON:0000033!6.73e-44!123;UBERON:0000153!5.85e-43!129;UBERON:0007811!5.85e-43!129;UBERON:0001950!3.15e-42!20;UBERON:0004121!2.67e-39!169;UBERON:0000924!5.10e-38!173;UBERON:0006601!5.10e-38!173;UBERON:0007023!8.07e-36!115;UBERON:0003076!1.58e-22!15;UBERON:0003057!1.58e-22!15;UBERON:0000025!1.49e-16!194;UBERON:0002420!2.47e-16!9;UBERON:0007245!2.47e-16!9;UBERON:0010009!2.47e-16!9;UBERON:0010011!2.47e-16!9;UBERON:0000454!2.47e-16!9;UBERON:0004733!2.49e-16!12;UBERON:0002028!2.49e-16!12;UBERON:0007277!2.49e-16!12;UBERON:0002308!2.57e-16!9;UBERON:0000125!2.57e-16!9;UBERON:0001871!6.34e-15!7;UBERON:0004732!6.59e-15!13;UBERON:0000200!8.95e-15!6;UBERON:0000064!9.09e-14!219;UBERON:0000483!1.27e-13!309;UBERON:0000119!2.43e-13!312;UBERON:0000349!1.90e-12!5;UBERON:0000475!3.06e-12!365;UBERON:0001872!3.26e-12!5;UBERON:0002021!4.41e-12!5;UBERON:0009663!8.59e-12!7;UBERON:0002298!3.12e-11!8;UBERON:0004111!7.43e-11!241;UBERON:0000477!9.44e-11!286;UBERON:0002680!2.68e-10!9;UBERON:0001895!2.68e-10!9;UBERON:0010092!2.68e-10!9;UBERON:0000369!1.05e-09!4;UBERON:0002435!1.05e-09!4;UBERON:0000204!1.05e-09!4;UBERON:0010082!1.05e-09!4;UBERON:0000988!1.01e-08!3;UBERON:0000488!1.22e-08!4;UBERON:0002771!1.81e-08!3;UBERON:0001896!2.94e-08!3;UBERON:0005290!2.94e-08!3;UBERON:0010096!2.94e-08!3;UBERON:0000062!3.23e-08!511;UBERON:0002240!3.56e-08!3;UBERON:0005383!1.07e-07!3;UBERON:0005382!1.07e-07!3;UBERON:0000481!2.16e-07!347;UBERON:0001778!7.54e-07!3;UBERON:0001775!7.54e-07!3 | ||
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|short_description=p3@CDH18 | |short_description=p3@CDH18 | ||
}} | }} |
Latest revision as of 12:58, 17 September 2015
Short description: | p3@CDH18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH18_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000507632, ENST00000507958, ENST00000542864_5end |
EntrezGene: | CDH18 |
HGNC: | 1757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data