FFCP PHASE1:Hg19::chr2:7073206..7073223,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20457 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000480970_5end | |||
|cluster_id=chr2:7073206..7073223,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_RNF144A_5end | |||
|id=chr2:7073206..7073223,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.33e-23;82!UBERON:0006241;1.00e-11;3!UBERON:0003057;1.00e-11;3!UBERON:0006215;1.75e-10;3!UBERON:0010122;6.42e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.58e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.72e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.67e-98!57;UBERON:0005068!1.67e-98!57;UBERON:0006241!1.67e-98!57;UBERON:0007135!1.67e-98!57;UBERON:0001017!1.54e-82!82;UBERON:0002616!4.72e-82!59;UBERON:0005743!4.38e-81!86;UBERON:0002780!4.52e-76!41;UBERON:0001890!4.52e-76!41;UBERON:0006240!4.52e-76!41;UBERON:0000073!1.92e-75!94;UBERON:0001016!1.92e-75!94;UBERON:0000955!2.86e-74!69;UBERON:0006238!2.86e-74!69;UBERON:0003080!4.73e-74!42;UBERON:0001893!2.17e-72!34;UBERON:0002020!3.06e-72!34;UBERON:0003528!3.06e-72!34;UBERON:0002791!7.38e-70!33;UBERON:0003075!1.62e-69!86;UBERON:0007284!1.62e-69!86;UBERON:0001869!7.55e-67!32;UBERON:0002346!7.57e-66!90;UBERON:0002619!7.35e-57!22;UBERON:0001950!7.09e-52!20;UBERON:0007023!1.16e-51!115;UBERON:0003056!8.44e-51!61;UBERON:0000956!1.66e-49!25;UBERON:0000203!1.66e-49!25;UBERON:0000033!3.42e-40!123;UBERON:0000153!1.65e-39!129;UBERON:0007811!1.65e-39!129;UBERON:0004121!2.28e-39!169;UBERON:0000924!3.92e-38!173;UBERON:0006601!3.92e-38!173;UBERON:0003076!3.98e-24!15;UBERON:0003057!3.98e-24!15;UBERON:0002308!5.87e-24!9;UBERON:0000125!5.87e-24!9;UBERON:0002420!9.00e-24!9;UBERON:0007245!9.00e-24!9;UBERON:0010009!9.00e-24!9;UBERON:0010011!9.00e-24!9;UBERON:0000454!9.00e-24!9;UBERON:0000025!3.92e-21!194;UBERON:0001871!8.70e-21!7;UBERON:0004732!1.51e-19!13;UBERON:0009663!5.92e-19!7;UBERON:0004733!4.75e-17!12;UBERON:0002028!4.75e-17!12;UBERON:0007277!4.75e-17!12;UBERON:0002298!6.11e-17!8;UBERON:0000200!2.19e-16!6;UBERON:0004111!1.48e-14!241;UBERON:0000349!7.12e-14!5;UBERON:0001872!1.27e-13!5;UBERON:0002021!1.79e-13!5;UBERON:0000064!4.77e-13!219;UBERON:0000483!5.56e-12!309;UBERON:0000475!6.76e-12!365;UBERON:0000477!9.20e-12!286;UBERON:0000119!9.70e-12!312;UBERON:0000369!4.16e-11!4;UBERON:0002435!4.16e-11!4;UBERON:0000204!4.16e-11!4;UBERON:0010082!4.16e-11!4;UBERON:0002680!2.48e-10!9;UBERON:0001895!2.48e-10!9;UBERON:0010092!2.48e-10!9;UBERON:0006331!2.05e-09!3;UBERON:0000988!2.42e-09!3;UBERON:0002771!2.42e-09!3;UBERON:0002240!3.10e-09!3;UBERON:0001896!3.36e-09!3;UBERON:0005290!3.36e-09!3;UBERON:0010096!3.36e-09!3;UBERON:0005383!1.28e-08!3;UBERON:0005382!1.28e-08!3;UBERON:0000062!8.93e-08!511;UBERON:0005162!3.68e-07!2;UBERON:0000122!3.68e-07!2;UBERON:0001897!5.80e-07!2;UBERON:0001875!7.68e-07!2;UBERON:0006514!7.68e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.41e-80;34!UBERON:0003528;2.69e-80;34!UBERON:0002020;2.69e-80;34!UBERON:0002791;1.77e-79;32!UBERON:0001869;3.02e-79;32!UBERON:0002619;6.30e-75;22!UBERON:0002780;8.82e-69;41!UBERON:0001890;8.82e-69;41!UBERON:0001950;2.77e-68;20!UBERON:0000956;1.41e-65;25!UBERON:0000203;1.41e-65;25!UBERON:0000073;6.61e-65;53!UBERON:0002616;6.61e-65;53!UBERON:0001017;3.12e-44;75!UBERON:0000955;1.27e-40;68!UBERON:0001016;6.44e-38;83!UBERON:0000125;3.59e-31;9!UBERON:0002308;3.59e-31;9!UBERON:0002420;6.11e-31;9!UBERON:0007245;6.11e-31;9!UBERON:0010009;6.11e-31;9!UBERON:0010011;6.11e-31;9!UBERON:0000454;6.11e-31;9!UBERON:0004732;9.70e-26;13!UBERON:0009663;1.49e-24;7!UBERON:0001871;1.76e-23;6!UBERON:0004733;2.05e-22;12!UBERON:0002028;2.05e-22;12!UBERON:0002298;9.98e-22;6!UBERON:0000200;3.92e-21;6!UBERON:0000349;7.21e-18;5!UBERON:0001872;1.45e-17;5!UBERON:0007023;2.14e-17;114!UBERON:0002021;2.41e-17;5!UBERON:0000369;3.54e-14;4!UBERON:0002435;3.54e-14;4!UBERON:0000204;3.54e-14;4!UBERON:0011216;4.32e-14;132!UBERON:0002680;1.74e-13;9!UBERON:0001895;1.74e-13;9!UBERON:0000988;8.06e-12;3!UBERON:0002240;1.00e-11;3!UBERON:0005174;1.00e-11;3!UBERON:0001137;1.00e-11;3!UBERON:0001896;1.20e-11;3!UBERON:0005290;1.20e-11;3!UBERON:0001870;2.36e-11;3!UBERON:0005383;6.85e-11;3!UBERON:0005382;6.85e-11;3!UBERON:0010314;3.69e-10;132!UBERON:0005162;5.77e-09;2!UBERON:0000122;5.77e-09;2!UBERON:0001897;1.03e-08;2!UBERON:0010225;1.03e-08;2!UBERON:0001875;1.55e-08;2!UBERON:0006514;1.55e-08;2!UBERON:0002771;2.49e-08;2!UBERON:0002148;2.49e-08;2!UBERON:0006331;2.49e-08;2!UBERON:0009662;2.49e-08;2!UBERON:0001954;3.51e-08;2!UBERON:0003022;3.51e-08;2!UBERON:0002421;3.51e-08;2!UBERON:0002600;3.51e-08;2!UBERON:0001876;4.27e-08;2!UBERON:0002702;4.75e-08;2!UBERON:0001873;6.42e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.32e-128,56;UBERON:0005068,1.32e-128,56;UBERON:0006241,1.32e-128,56;UBERON:0007135,1.32e-128,56;UBERON:0000073,3.21e-118,53;UBERON:0002616,3.21e-118,53;UBERON:0001017,2.95e-101,81;UBERON:0000955,7.12e-98,68;UBERON:0006238,7.12e-98,68;UBERON:0001893,5.79e-96,34;UBERON:0002780,8.78e-96,41;UBERON:0001890,8.78e-96,41;UBERON:0003080,8.78e-96,41;UBERON:0006240,8.78e-96,41;UBERON:0003528,9.15e-96,34;UBERON:0002020,9.15e-96,34;UBERON:0001016,1.80e-94,89;UBERON:0003075,3.07e-89,82;UBERON:0007284,3.07e-89,82;UBERON:0002791,6.64e-89,32;UBERON:0001869,1.35e-88,32;UBERON:0002346,1.22e-84,86;UBERON:0002619,6.89e-75,22;UBERON:0010371,1.63e-74,104;UBERON:0001950,2.87e-68,20;UBERON:0003056,3.66e-66,61;UBERON:0000956,1.52e-65,25;UBERON:0000203,1.52e-65,25;UBERON:0007023,1.31e-56,114;UBERON:0010314,3.96e-54,132;UBERON:0004121,9.09e-49,171;UBERON:0000924,9.09e-49,171;UBERON:0006601,9.09e-49,171;UBERON:0011216,8.80e-35,223;UBERON:0003076,8.19e-32,15;UBERON:0003057,8.19e-32,15;UBERON:0000125,3.29e-31,9;UBERON:0002308,3.29e-31,9;UBERON:0002420,5.79e-31,9;UBERON:0007245,5.79e-31,9;UBERON:0010009,5.79e-31,9;UBERON:0010011,5.79e-31,9;UBERON:0000454,5.79e-31,9;UBERON:0000025,2.11e-30,192;UBERON:0004732,9.97e-26,13;UBERON:0009663,1.42e-24,7;UBERON:0001871,1.64e-23,6;UBERON:0004733,2.10e-22,12;UBERON:0002028,2.10e-22,12;UBERON:0007277,2.10e-22,12;UBERON:0004111,3.40e-22,240;UBERON:0002298,8.96e-22,6;UBERON:0000200,3.59e-21,6;UBERON:0000483,3.61e-18,306;UBERON:0000119,6.95e-18,309;UBERON:0000349,7.60e-18,5;UBERON:0001872,1.64e-17,5;UBERON:0002021,2.58e-17,5;UBERON:0000369,3.48e-14,4;UBERON:0002435,3.48e-14,4;UBERON:0000204,3.48e-14,4;UBERON:0010082,3.48e-14,4;UBERON:0002680,1.82e-13,9;UBERON:0001895,1.82e-13,9;UBERON:0010092,1.82e-13,9;UBERON:0000988,7.50e-12,3;UBERON:0002240,1.04e-11,3;UBERON:0005174,1.04e-11,3;UBERON:0001137,1.04e-11,3;UBERON:0001896,1.16e-11,3;UBERON:0005290,1.16e-11,3;UBERON:0010096,1.16e-11,3;UBERON:0001870,2.20e-11,3;UBERON:0005383,6.74e-11,3;UBERON:0005382,6.74e-11,3;UBERON:0005162,5.67e-09,2;UBERON:0000122,5.67e-09,2;UBERON:0001897,1.03e-08,2;UBERON:0010225,1.03e-08,2;UBERON:0001875,1.50e-08,2;UBERON:0006514,1.50e-08,2;UBERON:0002148,2.40e-08,2;UBERON:0006331,2.40e-08,2;UBERON:0009662,2.40e-08,2;UBERON:0002771,2.49e-08,2;UBERON:0000923,2.98e-08,560;UBERON:0010316,2.98e-08,560;UBERON:0005291,2.98e-08,560;UBERON:0006598,2.98e-08,560;UBERON:0010317,2.98e-08,560;UBERON:0002532,2.98e-08,560;UBERON:0001954,3.70e-08,2;UBERON:0003022,3.70e-08,2;UBERON:0002421,3.70e-08,2;UBERON:0002600,3.70e-08,2;UBERON:0002050,4.15e-08,564;UBERON:0001876,4.27e-08,2;UBERON:0002702,4.27e-08,2;UBERON:0001873,6.31e-08,2;UBERON:0010122,6.31e-08,2;UBERON:0005423,1.60e-07,581;UBERON:0000922,3.69e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,2.28661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04913549066956,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,24.4764784554292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4479894297139,12.6164613500118,0,0,0,0,0,0,0,0,0,0,12.4003794013937,8.92413645828019,3.05163472634166,6.08185929621735,2.06883333267483,2.63262476584767,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.70508766145,0,27.64320459559,0,0,0,0,2.41981432097328,1.83643656978294,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0046586415433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6109275064545,34.6370608596742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,27.5130880345383,0,0,0,0,0,14.883641381216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9625592870475,25.6531247380819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,8.54183854313742,29.6702505774405,6.88091034828085,31.3929215849292,26.2667784442052,0,0,1.66814029295813,8.27849467280405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.9566880478502,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5434724733432,8.5017945795351,38.1524923146591,8.61488729811171,2.26864526599546,11.6184184139886,12.5951003592844,82.8062637503095,0,0,0,0,0,0,0,0,0,0,0,0,0,14.72319344681,10.15401528198,22.7355476151302,18.5808323868147,2.18789923607288,0,0,0,0,0,0.672567444437648,0,0,0,0,0,27.7316510545473,13.2203274861327,0,0,0,5.81327682689207,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,13.1526672967013,22.8725728251856,26.2046551101708,0,0,0.128915775947154,0,0,0,0,0,0,62.7827374203357,0,12.9863746264647,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8750831837634,64.2318904302369,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@RNF144A | |||
}} |
Latest revision as of 06:53, 18 September 2015
Short description: | p2@RNF144A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF144A_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000480970_5end |
EntrezGene: | RNF144A |
HGNC: | 20457 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|