FFCP PHASE1:Hg19::chr5:87980633..87980649,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000509265,ENST00000513805_5end | |||
|cluster_id=chr5:87980633..87980649,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_LINC00461_5end | |||
|id=chr5:87980633..87980649,- | |||
|ontology_enrichment_celltype=CL:0000128!1.00e-12!7;CL:0000126!1.00e-12!7;CL:0000127!1.00e-12!7;CL:0002453!1.00e-12!7;CL:0002319!4.01e-11!25;CL:0002605!9.30e-09!3;CL:0000047!2.15e-08!8;CL:0002603!6.32e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.58e-13;25!CL:0000128;1.83e-12;7!CL:0000126;1.83e-12;7!CL:0000127;1.83e-12;7!CL:0002605;1.86e-11;3!CL:0000047;2.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.74e-13,25;CL:0000128,1.99e-12,7;CL:0000126,1.99e-12,7;CL:0000127,1.99e-12,7;CL:0002453,1.99e-12,7;CL:0002605,1.83e-11,3;CL:0000047,2.55e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.24e-17;82!UBERON:0006215;1.14e-11;3!UBERON:0006241;3.31e-10;3!UBERON:0003057;3.31e-10;3!UBERON:0010122;1.65e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.58e-82;32!UBERON:0001893;5.90e-81;34!UBERON:0003528;3.66e-79;34!UBERON:0002020;3.66e-79;34!UBERON:0002791;6.82e-78;32!UBERON:0000956;2.05e-76;25!UBERON:0000203;2.05e-76;25!UBERON:0000073;1.02e-67;53!UBERON:0002616;1.02e-67;53!UBERON:0002780;9.46e-67;41!UBERON:0001890;9.46e-67;41!UBERON:0002619;1.91e-66;22!UBERON:0001950;6.47e-60;20!UBERON:0001017;5.43e-43;75!UBERON:0000955;2.65e-42;68!UBERON:0001016;1.55e-39;83!UBERON:0004733;1.48e-25;12!UBERON:0002028;1.48e-25;12!UBERON:0004732;1.96e-23;13!UBERON:0002680;9.84e-23;9!UBERON:0001895;9.84e-23;9!UBERON:0000200;5.57e-20;6!UBERON:0001871;2.47e-17;6!UBERON:0002420;4.12e-17;9!UBERON:0007245;4.12e-17;9!UBERON:0010009;4.12e-17;9!UBERON:0010011;4.12e-17;9!UBERON:0000454;4.12e-17;9!UBERON:0000349;4.48e-17;5!UBERON:0001872;5.21e-17;5!UBERON:0002021;1.26e-16;5!UBERON:0000125;1.35e-16;9!UBERON:0002308;1.35e-16;9!UBERON:0002037;8.96e-15;6!UBERON:0000369;1.25e-13;4!UBERON:0002435;1.25e-13;4!UBERON:0000204;1.25e-13;4!UBERON:0011216;1.32e-12;132!UBERON:0002298;1.61e-12;6!UBERON:0007023;1.95e-12;114!UBERON:0009663;1.48e-11;7!UBERON:0001870;5.59e-11;3!UBERON:0005383;1.11e-10;3!UBERON:0005382;1.11e-10;3!UBERON:0002240;3.31e-10;3!UBERON:0005174;3.31e-10;3!UBERON:0001137;3.31e-10;3!UBERON:0000988;1.02e-09;3!UBERON:0010314;9.19e-09;132!UBERON:0001954;4.09e-08;2!UBERON:0003022;4.09e-08;2!UBERON:0002421;4.09e-08;2!UBERON:0002600;4.09e-08;2!UBERON:0002771;5.40e-08;2!UBERON:0002702;6.20e-08;2!UBERON:0001876;1.05e-07;2!UBERON:0002784;1.07e-07;4!UBERON:0001873;1.65e-07;2!UBERON:0001894;1.85e-07;7!UBERON:0001897;1.98e-07;2!UBERON:0010225;1.98e-07;2!UBERON:0002148;5.01e-07;2!UBERON:0006331;5.01e-07;2!UBERON:0009662;5.01e-07;2 | |||
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|short_description=p5@LINC00461 | |||
}} |
Latest revision as of 03:18, 19 September 2015
Short description: | p5@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LINC00461_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000509265, ENST00000513805_5end |
EntrezGene: | NA |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.74e-13 | 25 |
oligodendrocyte | 1.99e-12 | 7 |
macroglial cell | 1.99e-12 | 7 |
astrocyte | 1.99e-12 | 7 |
oligodendrocyte precursor cell | 1.99e-12 | 7 |
astrocyte of the cerebral cortex | 1.83e-11 | 3 |
neuronal stem cell | 2.55e-11 | 8 |