FFCP PHASE1:Hg19::chr18:40695604..40695667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6014 | |EntrezGene=6014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10017 | |HGNC=10017 | ||
|TSSclassifier=strong | |||
|UniProt=Q99578 | |UniProt=Q99578 | ||
|association_with_transcript=0bp_to_ENST00000282028,ENST00000326695,NM_002930,uc002lav.2,uc010dnf.2_5end | |association_with_transcript=0bp_to_ENST00000282028,ENST00000326695,NM_002930,uc002lav.2,uc010dnf.2_5end | ||
|cluster_id=chr18:40695604..40695667,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_1_at_RIT2_5end | |description=CAGE_peak_1_at_RIT2_5end | ||
|id=chr18:40695604..40695667,- | |id=chr18:40695604..40695667,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.50e-24;82!UBERON:0006215;2.04e-12;3!UBERON:0006241;1.82e-10;3!UBERON:0003057;1.82e-10;3!UBERON:0010122;3.41e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-100!57;UBERON:0005068!1.89e-100!57;UBERON:0006241!1.89e-100!57;UBERON:0007135!1.89e-100!57;UBERON:0001017!2.64e-90!82;UBERON:0005743!1.29e-88!86;UBERON:0000073!9.11e-85!94;UBERON:0001016!9.11e-85!94;UBERON:0002616!1.13e-84!59;UBERON:0000955!5.25e-80!69;UBERON:0006238!5.25e-80!69;UBERON:0002780!1.00e-79!41;UBERON:0001890!1.00e-79!41;UBERON:0006240!1.00e-79!41;UBERON:0003075!3.34e-79!86;UBERON:0007284!3.34e-79!86;UBERON:0003080!1.33e-77!42;UBERON:0002346!4.79e-75!90;UBERON:0002020!3.25e-69!34;UBERON:0003528!3.25e-69!34;UBERON:0001893!3.57e-69!34;UBERON:0002791!1.15e-66!33;UBERON:0001869!5.88e-65!32;UBERON:0007023!1.60e-64!115;UBERON:0003056!4.03e-53!61;UBERON:0002619!3.79e-51!22;UBERON:0004121!5.03e-49!169;UBERON:0000956!1.89e-48!25;UBERON:0000203!1.89e-48!25;UBERON:0000924!1.57e-47!173;UBERON:0006601!1.57e-47!173;UBERON:0001950!1.87e-46!20;UBERON:0000033!5.84e-45!123;UBERON:0000153!3.15e-42!129;UBERON:0007811!3.15e-42!129;UBERON:0000025!3.00e-29!194;UBERON:0003076!1.11e-22!15;UBERON:0003057!1.11e-22!15;UBERON:0002420!5.85e-22!9;UBERON:0007245!5.85e-22!9;UBERON:0010009!5.85e-22!9;UBERON:0010011!5.85e-22!9;UBERON:0000454!5.85e-22!9;UBERON:0002308!6.95e-22!9;UBERON:0000125!6.95e-22!9;UBERON:0004111!1.35e-21!241;UBERON:0009663!1.88e-17!7;UBERON:0000477!9.19e-17!286;UBERON:0000483!9.22e-17!309;UBERON:0004733!1.42e-16!12;UBERON:0002028!1.42e-16!12;UBERON:0007277!1.42e-16!12;UBERON:0000119!1.89e-16!312;UBERON:0000200!8.96e-16!6;UBERON:0001871!1.31e-15!7;UBERON:0004732!3.81e-15!13;UBERON:0002298!8.00e-15!8;UBERON:0001872!1.32e-13!5;UBERON:0000064!2.04e-13!219;UBERON:0002021!2.75e-13!5;UBERON:0000349!3.20e-13!5;UBERON:0001894!1.03e-11!7;UBERON:0006222!1.03e-11!7;UBERON:0000369!2.57e-11!4;UBERON:0002435!2.57e-11!4;UBERON:0000204!2.57e-11!4;UBERON:0010082!2.57e-11!4;UBERON:0002680!1.53e-10!9;UBERON:0001895!1.53e-10!9;UBERON:0010092!1.53e-10!9;UBERON:0000475!3.84e-10!365;UBERON:0000062!3.99e-09!511;UBERON:0005383!6.79e-09!3;UBERON:0005382!6.79e-09!3;UBERON:0000922!7.04e-09!612;UBERON:0002771!1.14e-08!3;UBERON:0000988!1.62e-08!3;UBERON:0001896!3.19e-08!3;UBERON:0005290!3.19e-08!3;UBERON:0010096!3.19e-08!3;UBERON:0006331!3.52e-08!3;UBERON:0000923!4.53e-08!604;UBERON:0005291!4.53e-08!604;UBERON:0006598!4.53e-08!604;UBERON:0002532!4.53e-08!604;UBERON:0000481!4.74e-08!347;UBERON:0002240!4.84e-08!3;UBERON:0002050!5.00e-08!605;UBERON:0005423!5.00e-08!605;UBERON:0000467!9.33e-08!625;UBERON:0000480!1.03e-07!626;UBERON:0000468!6.38e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!1.89e-100!57;UBERON:0005068!1.89e-100!57;UBERON:0006241!1.89e-100!57;UBERON:0007135!1.89e-100!57;UBERON:0001017!2.64e-90!82;UBERON:0005743!1.29e-88!86;UBERON:0000073!9.11e-85!94;UBERON:0001016!9.11e-85!94;UBERON:0002616!1.13e-84!59;UBERON:0000955!5.25e-80!69;UBERON:0006238!5.25e-80!69;UBERON:0002780!1.00e-79!41;UBERON:0001890!1.00e-79!41;UBERON:0006240!1.00e-79!41;UBERON:0003075!3.34e-79!86;UBERON:0007284!3.34e-79!86;UBERON:0003080!1.33e-77!42;UBERON:0002346!4.79e-75!90;UBERON:0002020!3.25e-69!34;UBERON:0003528!3.25e-69!34;UBERON:0001893!3.57e-69!34;UBERON:0002791!1.15e-66!33;UBERON:0001869!5.88e-65!32;UBERON:0007023!1.60e-64!115;UBERON:0003056!4.03e-53!61;UBERON:0002619!3.79e-51!22;UBERON:0004121!5.03e-49!169;UBERON:0000956!1.89e-48!25;UBERON:0000203!1.89e-48!25;UBERON:0000924!1.57e-47!173;UBERON:0006601!1.57e-47!173;UBERON:0001950!1.87e-46!20;UBERON:0000033!5.84e-45!123;UBERON:0000153!3.15e-42!129;UBERON:0007811!3.15e-42!129;UBERON:0000025!3.00e-29!194;UBERON:0003076!1.11e-22!15;UBERON:0003057!1.11e-22!15;UBERON:0002420!5.85e-22!9;UBERON:0007245!5.85e-22!9;UBERON:0010009!5.85e-22!9;UBERON:0010011!5.85e-22!9;UBERON:0000454!5.85e-22!9;UBERON:0002308!6.95e-22!9;UBERON:0000125!6.95e-22!9;UBERON:0004111!1.35e-21!241;UBERON:0009663!1.88e-17!7;UBERON:0000477!9.19e-17!286;UBERON:0000483!9.22e-17!309;UBERON:0004733!1.42e-16!12;UBERON:0002028!1.42e-16!12;UBERON:0007277!1.42e-16!12;UBERON:0000119!1.89e-16!312;UBERON:0000200!8.96e-16!6;UBERON:0001871!1.31e-15!7;UBERON:0004732!3.81e-15!13;UBERON:0002298!8.00e-15!8;UBERON:0001872!1.32e-13!5;UBERON:0000064!2.04e-13!219;UBERON:0002021!2.75e-13!5;UBERON:0000349!3.20e-13!5;UBERON:0001894!1.03e-11!7;UBERON:0006222!1.03e-11!7;UBERON:0000369!2.57e-11!4;UBERON:0002435!2.57e-11!4;UBERON:0000204!2.57e-11!4;UBERON:0010082!2.57e-11!4;UBERON:0002680!1.53e-10!9;UBERON:0001895!1.53e-10!9;UBERON:0010092!1.53e-10!9;UBERON:0000475!3.84e-10!365;UBERON:0000062!3.99e-09!511;UBERON:0005383!6.79e-09!3;UBERON:0005382!6.79e-09!3;UBERON:0000922!7.04e-09!612;UBERON:0002771!1.14e-08!3;UBERON:0000988!1.62e-08!3;UBERON:0001896!3.19e-08!3;UBERON:0005290!3.19e-08!3;UBERON:0010096!3.19e-08!3;UBERON:0006331!3.52e-08!3;UBERON:0000923!4.53e-08!604;UBERON:0005291!4.53e-08!604;UBERON:0006598!4.53e-08!604;UBERON:0002532!4.53e-08!604;UBERON:0000481!4.74e-08!347;UBERON:0002240!4.84e-08!3;UBERON:0002050!5.00e-08!605;UBERON:0005423!5.00e-08!605;UBERON:0000467!9.33e-08!625;UBERON:0000480!1.03e-07!626;UBERON:0000468!6.38e-07!659 | ||
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|short_description=p1@RIT2 | |short_description=p1@RIT2 | ||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p1@RIT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIT2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000282028, ENST00000326695, NM_002930, uc002lav.2, uc010dnf.2_5end |
EntrezGene: | RIT2 |
HGNC: | 10017 |
UniProt: | Q99578 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data