FFCP PHASE1:Hg19::chr18:40695604..40695667,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6014 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10017 | |||
|TSSclassifier=strong | |||
|UniProt=Q99578 | |||
|association_with_transcript=0bp_to_ENST00000282028,ENST00000326695,NM_002930,uc002lav.2,uc010dnf.2_5end | |||
|cluster_id=chr18:40695604..40695667,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_RIT2_5end | |||
|id=chr18:40695604..40695667,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.50e-24;82!UBERON:0006215;2.04e-12;3!UBERON:0006241;1.82e-10;3!UBERON:0003057;1.82e-10;3!UBERON:0010122;3.41e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-100!57;UBERON:0005068!1.89e-100!57;UBERON:0006241!1.89e-100!57;UBERON:0007135!1.89e-100!57;UBERON:0001017!2.64e-90!82;UBERON:0005743!1.29e-88!86;UBERON:0000073!9.11e-85!94;UBERON:0001016!9.11e-85!94;UBERON:0002616!1.13e-84!59;UBERON:0000955!5.25e-80!69;UBERON:0006238!5.25e-80!69;UBERON:0002780!1.00e-79!41;UBERON:0001890!1.00e-79!41;UBERON:0006240!1.00e-79!41;UBERON:0003075!3.34e-79!86;UBERON:0007284!3.34e-79!86;UBERON:0003080!1.33e-77!42;UBERON:0002346!4.79e-75!90;UBERON:0002020!3.25e-69!34;UBERON:0003528!3.25e-69!34;UBERON:0001893!3.57e-69!34;UBERON:0002791!1.15e-66!33;UBERON:0001869!5.88e-65!32;UBERON:0007023!1.60e-64!115;UBERON:0003056!4.03e-53!61;UBERON:0002619!3.79e-51!22;UBERON:0004121!5.03e-49!169;UBERON:0000956!1.89e-48!25;UBERON:0000203!1.89e-48!25;UBERON:0000924!1.57e-47!173;UBERON:0006601!1.57e-47!173;UBERON:0001950!1.87e-46!20;UBERON:0000033!5.84e-45!123;UBERON:0000153!3.15e-42!129;UBERON:0007811!3.15e-42!129;UBERON:0000025!3.00e-29!194;UBERON:0003076!1.11e-22!15;UBERON:0003057!1.11e-22!15;UBERON:0002420!5.85e-22!9;UBERON:0007245!5.85e-22!9;UBERON:0010009!5.85e-22!9;UBERON:0010011!5.85e-22!9;UBERON:0000454!5.85e-22!9;UBERON:0002308!6.95e-22!9;UBERON:0000125!6.95e-22!9;UBERON:0004111!1.35e-21!241;UBERON:0009663!1.88e-17!7;UBERON:0000477!9.19e-17!286;UBERON:0000483!9.22e-17!309;UBERON:0004733!1.42e-16!12;UBERON:0002028!1.42e-16!12;UBERON:0007277!1.42e-16!12;UBERON:0000119!1.89e-16!312;UBERON:0000200!8.96e-16!6;UBERON:0001871!1.31e-15!7;UBERON:0004732!3.81e-15!13;UBERON:0002298!8.00e-15!8;UBERON:0001872!1.32e-13!5;UBERON:0000064!2.04e-13!219;UBERON:0002021!2.75e-13!5;UBERON:0000349!3.20e-13!5;UBERON:0001894!1.03e-11!7;UBERON:0006222!1.03e-11!7;UBERON:0000369!2.57e-11!4;UBERON:0002435!2.57e-11!4;UBERON:0000204!2.57e-11!4;UBERON:0010082!2.57e-11!4;UBERON:0002680!1.53e-10!9;UBERON:0001895!1.53e-10!9;UBERON:0010092!1.53e-10!9;UBERON:0000475!3.84e-10!365;UBERON:0000062!3.99e-09!511;UBERON:0005383!6.79e-09!3;UBERON:0005382!6.79e-09!3;UBERON:0000922!7.04e-09!612;UBERON:0002771!1.14e-08!3;UBERON:0000988!1.62e-08!3;UBERON:0001896!3.19e-08!3;UBERON:0005290!3.19e-08!3;UBERON:0010096!3.19e-08!3;UBERON:0006331!3.52e-08!3;UBERON:0000923!4.53e-08!604;UBERON:0005291!4.53e-08!604;UBERON:0006598!4.53e-08!604;UBERON:0002532!4.53e-08!604;UBERON:0000481!4.74e-08!347;UBERON:0002240!4.84e-08!3;UBERON:0002050!5.00e-08!605;UBERON:0005423!5.00e-08!605;UBERON:0000467!9.33e-08!625;UBERON:0000480!1.03e-07!626;UBERON:0000468!6.38e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.03e-76;34!UBERON:0003528;1.61e-75;34!UBERON:0002020;1.61e-75;34!UBERON:0001869;1.28e-74;32!UBERON:0002791;2.51e-74;32!UBERON:0002619;4.63e-70;22!UBERON:0002780;3.71e-67;41!UBERON:0001890;3.71e-67;41!UBERON:0000073;1.97e-65;53!UBERON:0002616;1.97e-65;53!UBERON:0001950;1.35e-63;20!UBERON:0000956;2.76e-61;25!UBERON:0000203;2.76e-61;25!UBERON:0000955;1.35e-45;68!UBERON:0001017;4.31e-45;75!UBERON:0001016;1.81e-37;83!UBERON:0002420;1.28e-29;9!UBERON:0007245;1.28e-29;9!UBERON:0010009;1.28e-29;9!UBERON:0010011;1.28e-29;9!UBERON:0000454;1.28e-29;9!UBERON:0000125;1.39e-29;9!UBERON:0002308;1.39e-29;9!UBERON:0009663;1.82e-23;7!UBERON:0004733;1.14e-22;12!UBERON:0002028;1.14e-22;12!UBERON:0000200;3.13e-21;6!UBERON:0004732;8.66e-21;13!UBERON:0002298;3.59e-20;6!UBERON:0001872;3.73e-18;5!UBERON:0001871;6.23e-18;6!UBERON:0002021;1.29e-17;5!UBERON:0000349;1.70e-17;5!UBERON:0007023;1.29e-16;114!UBERON:0000369;5.48e-15;4!UBERON:0002435;5.48e-15;4!UBERON:0000204;5.48e-15;4!UBERON:0002680;2.70e-14;9!UBERON:0001895;2.70e-14;9!UBERON:0011216;9.67e-14;132!UBERON:0001870;1.04e-11;3!UBERON:0005383;1.12e-11;3!UBERON:0005382;1.12e-11;3!UBERON:0000988;3.78e-11;3!UBERON:0001896;9.40e-11;3!UBERON:0005290;9.40e-11;3!UBERON:0002240;1.82e-10;3!UBERON:0005174;1.82e-10;3!UBERON:0001137;1.82e-10;3!UBERON:0010314;4.28e-09;132!UBERON:0002702;2.70e-08;2!UBERON:0002771;3.18e-08;2!UBERON:0001873;3.41e-08;2!UBERON:0001954;5.12e-08;2!UBERON:0003022;5.12e-08;2!UBERON:0002421;5.12e-08;2!UBERON:0002600;5.12e-08;2!UBERON:0001876;7.39e-08;2!UBERON:0002148;8.06e-08;2!UBERON:0006331;8.06e-08;2!UBERON:0009662;8.06e-08;2!UBERON:0001894;1.78e-07;7!UBERON:0001875;2.27e-07;2!UBERON:0006514;2.27e-07;2!UBERON:0001897;3.17e-07;2!UBERON:0010225;3.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.00e-126,56;UBERON:0005068,9.00e-126,56;UBERON:0006241,9.00e-126,56;UBERON:0007135,9.00e-126,56;UBERON:0000073,1.79e-116,53;UBERON:0002616,1.79e-116,53;UBERON:0001017,8.13e-108,81;UBERON:0000955,3.54e-101,68;UBERON:0006238,3.54e-101,68;UBERON:0001016,5.46e-100,89;UBERON:0002780,9.24e-94,41;UBERON:0001890,9.24e-94,41;UBERON:0003080,9.24e-94,41;UBERON:0006240,9.24e-94,41;UBERON:0003528,8.48e-90,34;UBERON:0002020,8.48e-90,34;UBERON:0001893,9.61e-90,34;UBERON:0001869,6.09e-84,32;UBERON:0002791,1.81e-83,32;UBERON:0003075,5.55e-83,82;UBERON:0007284,5.55e-83,82;UBERON:0002346,1.14e-78,86;UBERON:0002619,4.06e-70,22;UBERON:0001950,1.24e-63,20;UBERON:0010371,2.56e-63,104;UBERON:0000956,2.45e-61,25;UBERON:0000203,2.45e-61,25;UBERON:0003056,1.32e-60,61;UBERON:0007023,2.10e-54,114;UBERON:0010314,3.99e-50,132;UBERON:0004121,1.80e-47,171;UBERON:0000924,1.80e-47,171;UBERON:0006601,1.80e-47,171;UBERON:0011216,8.95e-39,223;UBERON:0003076,4.49e-31,15;UBERON:0003057,4.49e-31,15;UBERON:0000025,4.94e-31,192;UBERON:0002420,1.23e-29,9;UBERON:0007245,1.23e-29,9;UBERON:0010009,1.23e-29,9;UBERON:0010011,1.23e-29,9;UBERON:0000454,1.23e-29,9;UBERON:0000125,1.57e-29,9;UBERON:0002308,1.57e-29,9;UBERON:0009663,2.02e-23,7;UBERON:0004111,1.19e-22,240;UBERON:0004733,1.25e-22,12;UBERON:0002028,1.25e-22,12;UBERON:0007277,1.25e-22,12;UBERON:0000200,4.15e-21,6;UBERON:0004732,9.41e-21,13;UBERON:0002298,4.05e-20,6;UBERON:0001872,4.00e-18,5;UBERON:0001871,5.87e-18,6;UBERON:0002021,1.11e-17,5;UBERON:0000349,1.36e-17,5;UBERON:0000483,2.05e-15,306;UBERON:0000119,3.69e-15,309;UBERON:0000369,5.68e-15,4;UBERON:0002435,5.68e-15,4;UBERON:0000204,5.68e-15,4;UBERON:0010082,5.68e-15,4;UBERON:0002680,2.79e-14,9;UBERON:0001895,2.79e-14,9;UBERON:0010092,2.79e-14,9;UBERON:0001870,1.12e-11,3;UBERON:0005383,1.21e-11,3;UBERON:0005382,1.21e-11,3;UBERON:0000988,3.98e-11,3;UBERON:0001896,1.01e-10,3;UBERON:0005290,1.01e-10,3;UBERON:0010096,1.01e-10,3;UBERON:0002240,1.79e-10,3;UBERON:0005174,1.79e-10,3;UBERON:0001137,1.79e-10,3;UBERON:0000923,2.12e-08,560;UBERON:0010316,2.12e-08,560;UBERON:0005291,2.12e-08,560;UBERON:0006598,2.12e-08,560;UBERON:0010317,2.12e-08,560;UBERON:0002532,2.12e-08,560;UBERON:0002702,2.85e-08,2;UBERON:0002050,2.97e-08,564;UBERON:0002771,3.54e-08,2;UBERON:0001873,3.66e-08,2;UBERON:0010122,3.66e-08,2;UBERON:0001954,4.86e-08,2;UBERON:0003022,4.86e-08,2;UBERON:0002421,4.86e-08,2;UBERON:0002600,4.86e-08,2;UBERON:0000922,6.39e-08,592;UBERON:0001876,6.43e-08,2;UBERON:0002148,8.20e-08,2;UBERON:0006331,8.20e-08,2;UBERON:0009662,8.20e-08,2;UBERON:0005423,1.18e-07,581;UBERON:0001894,1.67e-07,7;UBERON:0006222,1.67e-07,7;UBERON:0001875,2.35e-07,2;UBERON:0006514,2.35e-07,2;UBERON:0001897,2.51e-07,2;UBERON:0010225,2.51e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,1.54657762555539,1.50764638800914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,9.94147647766298,3.65740482667333,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,9.18404171802328,31.9382076801911,0,0,0,0,0,0,0,0,0,6.20018970069687,13.3862046874203,70.1875987058583,83.708499767937,38.7167380829147,9.21418668046685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.01101699471016,0,5.3880822516828,0,0,0,0,0,19.5886567443514,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,12.2189836194846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,1.23214841002794,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,11.9284453471395,4.35850899557042,0,0,0,0,0,10.6919219718123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13705460356962,7.53725829933333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2910226995048,11.2264163709806,7.51145584238999,3.44045517414043,6.21202688606373,6.20964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05118024373827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,1.63814457288021,0,0,0,0,0,0,3.20228299314188,0,0,10.9831974914946,8.5017945795351,6.70462208040035,6.76884001994492,23.6947394448415,6.70825348902913,7.9123066359607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4813893851271,9.37293718336617,12.8145813830734,9.70261895966774,18.0501686976012,0,0,0,0,0,0.336283722218824,0.606965604236632,1.13831095675649,0,0,0,10.4673388784321,6.18264071490781,0,0,0.078493092850514,16.6542525310962,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,2.55201007249429,3.26751040359795,5.9171801861676,0,0,0,0,0,0,0,0,0,2.15009374727177,0,7.81902137195519,14.3995727812325,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,1.86179392551411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@RIT2 | |||
}} |
Latest revision as of 13:40, 19 September 2015
Short description: | p1@RIT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIT2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000282028, ENST00000326695, NM_002930, uc002lav.2, uc010dnf.2_5end |
EntrezGene: | RIT2 |
HGNC: | 10017 |
UniProt: | Q99578 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data