FFCP PHASE1:Hg19::chr1:2005228..2005248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5590 | |EntrezGene=5590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9412 | |HGNC=9412 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD31 | |UniProt=D6RD31 | ||
|association_with_transcript=70bp_to_ENST00000495347_5end | |association_with_transcript=70bp_to_ENST00000495347_5end | ||
|cluster_id=chr1:2005228..2005248,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_PRKCZ_5end | |description=CAGE_peak_3_at_PRKCZ_5end | ||
|id=chr1:2005228..2005248,+ | |id=chr1:2005228..2005248,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.33e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.85e-21;82!UBERON:0006215;1.59e-09;3!UBERON:0006241;9.49e-09;3!UBERON:0003057;9.49e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.14e-58!82;UBERON:0000073!3.62e-57!94;UBERON:0001016!3.62e-57!94;UBERON:0005743!1.08e-56!86;UBERON:0001049!1.16e-55!57;UBERON:0005068!1.16e-55!57;UBERON:0006241!1.16e-55!57;UBERON:0007135!1.16e-55!57;UBERON:0000955!3.96e-49!69;UBERON:0006238!3.96e-49!69;UBERON:0002616!8.08e-48!59;UBERON:0002346!5.35e-45!90;UBERON:0003075!9.73e-45!86;UBERON:0007284!9.73e-45!86;UBERON:0001893!1.46e-44!34;UBERON:0002020!3.54e-44!34;UBERON:0003528!3.54e-44!34;UBERON:0002791!4.58e-43!33;UBERON:0002780!1.07e-42!41;UBERON:0001890!1.07e-42!41;UBERON:0006240!1.07e-42!41;UBERON:0001869!1.16e-41!32;UBERON:0003080!2.26e-41!42;UBERON:0000924!3.47e-35!173;UBERON:0006601!3.47e-35!173;UBERON:0004121!1.88e-34!169;UBERON:0000033!2.43e-32!123;UBERON:0000956!3.33e-32!25;UBERON:0000203!3.33e-32!25;UBERON:0003056!4.68e-32!61;UBERON:0002619!6.87e-30!22;UBERON:0000153!7.36e-30!129;UBERON:0007811!7.36e-30!129;UBERON:0001950!2.96e-27!20;UBERON:0007023!8.37e-23!115;UBERON:0000025!4.06e-16!194;UBERON:0003076!7.20e-15!15;UBERON:0003057!7.20e-15!15;UBERON:0002420!1.86e-13!9;UBERON:0007245!1.86e-13!9;UBERON:0010009!1.86e-13!9;UBERON:0010011!1.86e-13!9;UBERON:0000454!1.86e-13!9;UBERON:0002308!2.99e-13!9;UBERON:0000125!2.99e-13!9;UBERON:0004111!5.38e-13!241;UBERON:0004732!1.31e-12!13;UBERON:0000064!6.12e-12!219;UBERON:0000119!1.17e-11!312;UBERON:0000477!1.39e-11!286;UBERON:0004733!2.89e-11!12;UBERON:0002028!2.89e-11!12;UBERON:0007277!2.89e-11!12;UBERON:0000483!4.68e-11!309;UBERON:0009663!9.12e-11!7;UBERON:0000200!4.96e-10!6;UBERON:0000475!7.47e-10!365;UBERON:0001871!1.74e-09!7;UBERON:0002298!4.09e-09!8;UBERON:0000922!6.96e-09!612;UBERON:0001872!1.89e-08!5;UBERON:0002050!1.93e-08!605;UBERON:0005423!1.93e-08!605;UBERON:0002021!2.13e-08!5;UBERON:0000349!2.29e-08!5;UBERON:0000923!4.41e-08!604;UBERON:0005291!4.41e-08!604;UBERON:0006598!4.41e-08!604;UBERON:0002532!4.41e-08!604;UBERON:0002680!1.09e-07!9;UBERON:0001895!1.09e-07!9;UBERON:0010092!1.09e-07!9;UBERON:0000468!1.53e-07!659;UBERON:0000467!3.38e-07!625;UBERON:0000480!3.92e-07!626;UBERON:0000369!9.55e-07!4;UBERON:0002435!9.55e-07!4;UBERON:0000204!9.55e-07!4;UBERON:0010082!9.55e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.42e-61;34!UBERON:0003528;4.26e-60;34!UBERON:0002020;4.26e-60;34!UBERON:0001869;1.95e-59;32!UBERON:0002791;2.59e-59;32!UBERON:0002619;2.78e-56;22!UBERON:0001950;3.22e-51;20!UBERON:0002780;3.75e-51;41!UBERON:0001890;3.75e-51;41!UBERON:0000073;4.92e-50;53!UBERON:0002616;4.92e-50;53!UBERON:0000956;4.95e-49;25!UBERON:0000203;4.95e-49;25!UBERON:0001017;2.70e-36;75!UBERON:0000955;3.62e-34;68!UBERON:0001016;3.50e-33;83!UBERON:0002420;2.85e-24;9!UBERON:0007245;2.85e-24;9!UBERON:0010009;2.85e-24;9!UBERON:0010011;2.85e-24;9!UBERON:0000454;2.85e-24;9!UBERON:0000125;6.78e-24;9!UBERON:0002308;6.78e-24;9!UBERON:0004732;3.80e-20;13!UBERON:0009663;3.83e-19;7!UBERON:0000200;1.01e-17;6!UBERON:0004733;1.19e-17;12!UBERON:0002028;1.19e-17;12!UBERON:0002298;2.36e-16;6!UBERON:0001872;1.12e-14;5!UBERON:0002021;1.20e-14;5!UBERON:0001871;1.41e-14;6!UBERON:0000349;1.56e-14;5!UBERON:0007023;5.35e-14;114!UBERON:0011216;2.18e-12;132!UBERON:0000369;1.77e-11;4!UBERON:0002435;1.77e-11;4!UBERON:0000204;1.77e-11;4!UBERON:0002680;4.87e-11;9!UBERON:0001895;4.87e-11;9!UBERON:0001870;1.19e-09;3!UBERON:0000988;3.95e-09;3!UBERON:0001896;6.39e-09;3!UBERON:0005290;6.39e-09;3!UBERON:0002240;9.49e-09;3!UBERON:0005174;9.49e-09;3!UBERON:0001137;9.49e-09;3!UBERON:0005383;9.88e-09;3!UBERON:0005382;9.88e-09;3!UBERON:0010314;8.37e-08;132!UBERON:0005162;3.82e-07;2!UBERON:0000122;3.82e-07;2!UBERON:0002771;6.82e-07;2!UBERON:0002702;7.02e-07;2!UBERON:0001876;8.22e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.67e-96,56;UBERON:0005068,2.67e-96,56;UBERON:0006241,2.67e-96,56;UBERON:0007135,2.67e-96,56;UBERON:0001016,8.01e-95,89;UBERON:0001017,6.21e-92,81;UBERON:0000073,6.90e-89,53;UBERON:0002616,6.90e-89,53;UBERON:0000955,1.21e-76,68;UBERON:0006238,1.21e-76,68;UBERON:0001893,2.22e-72,34;UBERON:0003528,1.07e-71,34;UBERON:0002020,1.07e-71,34;UBERON:0002780,1.18e-71,41;UBERON:0001890,1.18e-71,41;UBERON:0003080,1.18e-71,41;UBERON:0006240,1.18e-71,41;UBERON:0003075,3.29e-68,82;UBERON:0007284,3.29e-68,82;UBERON:0001869,6.60e-67,32;UBERON:0002791,9.10e-67,32;UBERON:0002346,1.79e-64,86;UBERON:0002619,2.57e-56,22;UBERON:0001950,3.02e-51,20;UBERON:0003056,3.04e-51,61;UBERON:0010371,3.42e-51,104;UBERON:0000956,4.62e-49,25;UBERON:0000203,4.62e-49,25;UBERON:0004121,1.76e-48,171;UBERON:0000924,1.76e-48,171;UBERON:0006601,1.76e-48,171;UBERON:0007023,1.51e-44,114;UBERON:0010314,1.75e-41,132;UBERON:0011216,2.87e-35,223;UBERON:0003076,2.30e-24,15;UBERON:0003057,2.30e-24,15;UBERON:0002420,2.90e-24,9;UBERON:0007245,2.90e-24,9;UBERON:0010009,2.90e-24,9;UBERON:0010011,2.90e-24,9;UBERON:0000454,2.90e-24,9;UBERON:0000125,7.17e-24,9;UBERON:0002308,7.17e-24,9;UBERON:0000025,4.93e-23,192;UBERON:0004732,4.17e-20,13;UBERON:0009663,4.05e-19,7;UBERON:0004111,8.11e-18,240;UBERON:0000200,1.03e-17,6;UBERON:0004733,1.30e-17,12;UBERON:0002028,1.30e-17,12;UBERON:0007277,1.30e-17,12;UBERON:0002298,2.67e-16,6;UBERON:0001872,1.06e-14,5;UBERON:0001871,1.31e-14,6;UBERON:0002021,1.32e-14,5;UBERON:0000349,1.52e-14,5;UBERON:0000483,8.77e-13,306;UBERON:0000119,1.55e-12,309;UBERON:0000369,1.82e-11,4;UBERON:0002435,1.82e-11,4;UBERON:0000204,1.82e-11,4;UBERON:0010082,1.82e-11,4;UBERON:0002680,5.01e-11,9;UBERON:0001895,5.01e-11,9;UBERON:0010092,5.01e-11,9;UBERON:0000923,9.49e-11,560;UBERON:0010316,9.49e-11,560;UBERON:0005291,9.49e-11,560;UBERON:0006598,9.49e-11,560;UBERON:0010317,9.49e-11,560;UBERON:0002532,9.49e-11,560;UBERON:0002050,1.47e-10,564;UBERON:0005423,8.88e-10,581;UBERON:0001870,1.16e-09,3;UBERON:0000922,2.70e-09,592;UBERON:0000988,4.12e-09,3;UBERON:0001896,6.94e-09,3;UBERON:0005290,6.94e-09,3;UBERON:0010096,6.94e-09,3;UBERON:0002240,9.11e-09,3;UBERON:0005174,9.11e-09,3;UBERON:0001137,9.11e-09,3;UBERON:0005383,9.88e-09,3;UBERON:0005382,9.88e-09,3;UBERON:0005162,3.82e-07,2;UBERON:0000122,3.82e-07,2;UBERON:0002771,6.82e-07,2;UBERON:0002702,7.02e-07,2;UBERON:0001876,7.87e-07,2;UBERON:0001875,9.89e-07,2;UBERON:0006514,9.89e-07,2 | |||
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| ||
|short_description=p3@PRKCZ | |short_description=p3@PRKCZ | ||
}} | }} |
Latest revision as of 16:13, 19 September 2015
Short description: | p3@PRKCZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRKCZ_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 70bp_to_ENST00000495347_5end |
EntrezGene: | PRKCZ |
HGNC: | 9412 |
UniProt: | D6RD31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 7.33e-08 | 8 |