FFCP PHASE1:Hg19::chr7:86273863..86273914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2913 | |EntrezGene=2913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4595 | |HGNC=4595 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2I2 | |UniProt=C9J2I2 | ||
|association_with_transcript=13bp_to_ENST00000454217_5end | |association_with_transcript=13bp_to_ENST00000454217_5end | ||
|cluster_id=chr7:86273863..86273914,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_GRM3_5end | |description=CAGE_peak_3_at_GRM3_5end | ||
|id=chr7:86273863..86273914,+ | |id=chr7:86273863..86273914,+ | ||
|ontology_enrichment_celltype=CL:0000047!7.10e-15!8;CL:0000540!1.03e-14!6;CL:0000031!1.03e-14!6;CL:0000404!1.03e-14!6;CL:0002322!1.93e-11!5;CL:0002319!8.19e-09!25 | |ontology_enrichment_celltype=CL:0000047!7.10e-15!8;CL:0000540!1.03e-14!6;CL:0000031!1.03e-14!6;CL:0000404!1.03e-14!6;CL:0002322!1.93e-11!5;CL:0002319!8.19e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.82e-07;2!CL:0000242;2.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.17e-07,2;CL:0000047,4.50e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.58e-20;82!UBERON:0006241;1.21e-10;3!UBERON:0003057;1.21e-10;3!UBERON:0010122;2.56e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.14e-97!82;UBERON:0005743!9.88e-96!86;UBERON:0001049!5.51e-91!57;UBERON:0005068!5.51e-91!57;UBERON:0006241!5.51e-91!57;UBERON:0007135!5.51e-91!57;UBERON:0000073!7.23e-89!94;UBERON:0001016!7.23e-89!94;UBERON:0002616!7.26e-76!59;UBERON:0000955!1.58e-72!69;UBERON:0006238!1.58e-72!69;UBERON:0001893!8.48e-72!34;UBERON:0002020!2.35e-71!34;UBERON:0003528!2.35e-71!34;UBERON:0002780!9.45e-71!41;UBERON:0001890!9.45e-71!41;UBERON:0006240!9.45e-71!41;UBERON:0002791!3.21e-69!33;UBERON:0003080!7.35e-69!42;UBERON:0001869!6.22e-67!32;UBERON:0003075!3.04e-64!86;UBERON:0007284!3.04e-64!86;UBERON:0002346!8.18e-61!90;UBERON:0002619!4.17e-52!22;UBERON:0000956!2.42e-49!25;UBERON:0000203!2.42e-49!25;UBERON:0001950!1.09e-47!20;UBERON:0003056!3.80e-47!61;UBERON:0004121!7.99e-47!169;UBERON:0000924!2.12e-45!173;UBERON:0006601!2.12e-45!173;UBERON:0007023!4.11e-45!115;UBERON:0000033!5.68e-41!123;UBERON:0000153!1.80e-38!129;UBERON:0007811!1.80e-38!129;UBERON:0002308!3.50e-23!9;UBERON:0000125!3.50e-23!9;UBERON:0002420!6.22e-23!9;UBERON:0007245!6.22e-23!9;UBERON:0010009!6.22e-23!9;UBERON:0010011!6.22e-23!9;UBERON:0000454!6.22e-23!9;UBERON:0003076!5.32e-22!15;UBERON:0003057!5.32e-22!15;UBERON:0009663!1.24e-18!7;UBERON:0000025!5.31e-18!194;UBERON:0004732!5.59e-18!13;UBERON:0000200!4.89e-16!6;UBERON:0001871!1.04e-15!7;UBERON:0004733!1.27e-15!12;UBERON:0002028!1.27e-15!12;UBERON:0007277!1.27e-15!12;UBERON:0002298!3.52e-15!8;UBERON:0002021!5.04e-14!5;UBERON:0001872!7.70e-14!5;UBERON:0000349!5.99e-13!5;UBERON:0004111!3.61e-12!241;UBERON:0000369!7.26e-12!4;UBERON:0002435!7.26e-12!4;UBERON:0000204!7.26e-12!4;UBERON:0010082!7.26e-12!4;UBERON:0000064!5.50e-11!219;UBERON:0000483!6.18e-10!309;UBERON:0000477!1.01e-09!286;UBERON:0000119!1.01e-09!312;UBERON:0002680!1.50e-09!9;UBERON:0001895!1.50e-09!9;UBERON:0010092!1.50e-09!9;UBERON:0005383!3.21e-09!3;UBERON:0005382!3.21e-09!3;UBERON:0000475!8.31e-09!365;UBERON:0002771!1.28e-08!3;UBERON:0000988!1.38e-08!3;UBERON:0002240!1.79e-08!3;UBERON:0001896!1.88e-08!3;UBERON:0005290!1.88e-08!3;UBERON:0010096!1.88e-08!3;UBERON:0006331!2.09e-08!3;UBERON:0000922!2.57e-07!612;UBERON:0005162!7.88e-07!2;UBERON:0000122!7.88e-07!2;UBERON:0001873!9.83e-07!2;UBERON:0010122!9.83e-07!2 | |ontology_enrichment_uberon=UBERON:0001017!1.14e-97!82;UBERON:0005743!9.88e-96!86;UBERON:0001049!5.51e-91!57;UBERON:0005068!5.51e-91!57;UBERON:0006241!5.51e-91!57;UBERON:0007135!5.51e-91!57;UBERON:0000073!7.23e-89!94;UBERON:0001016!7.23e-89!94;UBERON:0002616!7.26e-76!59;UBERON:0000955!1.58e-72!69;UBERON:0006238!1.58e-72!69;UBERON:0001893!8.48e-72!34;UBERON:0002020!2.35e-71!34;UBERON:0003528!2.35e-71!34;UBERON:0002780!9.45e-71!41;UBERON:0001890!9.45e-71!41;UBERON:0006240!9.45e-71!41;UBERON:0002791!3.21e-69!33;UBERON:0003080!7.35e-69!42;UBERON:0001869!6.22e-67!32;UBERON:0003075!3.04e-64!86;UBERON:0007284!3.04e-64!86;UBERON:0002346!8.18e-61!90;UBERON:0002619!4.17e-52!22;UBERON:0000956!2.42e-49!25;UBERON:0000203!2.42e-49!25;UBERON:0001950!1.09e-47!20;UBERON:0003056!3.80e-47!61;UBERON:0004121!7.99e-47!169;UBERON:0000924!2.12e-45!173;UBERON:0006601!2.12e-45!173;UBERON:0007023!4.11e-45!115;UBERON:0000033!5.68e-41!123;UBERON:0000153!1.80e-38!129;UBERON:0007811!1.80e-38!129;UBERON:0002308!3.50e-23!9;UBERON:0000125!3.50e-23!9;UBERON:0002420!6.22e-23!9;UBERON:0007245!6.22e-23!9;UBERON:0010009!6.22e-23!9;UBERON:0010011!6.22e-23!9;UBERON:0000454!6.22e-23!9;UBERON:0003076!5.32e-22!15;UBERON:0003057!5.32e-22!15;UBERON:0009663!1.24e-18!7;UBERON:0000025!5.31e-18!194;UBERON:0004732!5.59e-18!13;UBERON:0000200!4.89e-16!6;UBERON:0001871!1.04e-15!7;UBERON:0004733!1.27e-15!12;UBERON:0002028!1.27e-15!12;UBERON:0007277!1.27e-15!12;UBERON:0002298!3.52e-15!8;UBERON:0002021!5.04e-14!5;UBERON:0001872!7.70e-14!5;UBERON:0000349!5.99e-13!5;UBERON:0004111!3.61e-12!241;UBERON:0000369!7.26e-12!4;UBERON:0002435!7.26e-12!4;UBERON:0000204!7.26e-12!4;UBERON:0010082!7.26e-12!4;UBERON:0000064!5.50e-11!219;UBERON:0000483!6.18e-10!309;UBERON:0000477!1.01e-09!286;UBERON:0000119!1.01e-09!312;UBERON:0002680!1.50e-09!9;UBERON:0001895!1.50e-09!9;UBERON:0010092!1.50e-09!9;UBERON:0005383!3.21e-09!3;UBERON:0005382!3.21e-09!3;UBERON:0000475!8.31e-09!365;UBERON:0002771!1.28e-08!3;UBERON:0000988!1.38e-08!3;UBERON:0002240!1.79e-08!3;UBERON:0001896!1.88e-08!3;UBERON:0005290!1.88e-08!3;UBERON:0010096!1.88e-08!3;UBERON:0006331!2.09e-08!3;UBERON:0000922!2.57e-07!612;UBERON:0005162!7.88e-07!2;UBERON:0000122!7.88e-07!2;UBERON:0001873!9.83e-07!2;UBERON:0010122!9.83e-07!2 | ||
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|short_description=p3@GRM3 | |short_description=p3@GRM3 | ||
}} | }} |
Latest revision as of 20:29, 19 September 2015
Short description: | p3@GRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRM3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 13bp_to_ENST00000454217_5end |
EntrezGene: | GRM3 |
HGNC: | 4595 |
UniProt: | C9J2I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.17e-07 | 2 |
neuronal stem cell | 4.50e-07 | 8 |