FFCP PHASE1:Hg19::chr9:123676827..123676865,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12031 | |||
|TSSclassifier=strong | |||
|UniProt=B4DJ77,Q13077 | |||
|association_with_transcript=0bp_to_ENST00000546084,NM_001190947,uc011lyg.1_5end | |||
|cluster_id=chr9:123676827..123676865,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_TRAF1_5end | |||
|id=chr9:123676827..123676865,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.30e-24;82!UBERON:0010122;3.25e-10;2!UBERON:0002532;1.27e-07;206!UBERON:0010316;1.27e-07;206!UBERON:0006241;7.08e-07;3!UBERON:0003057;7.08e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-94!57;UBERON:0005068!1.70e-94!57;UBERON:0006241!1.70e-94!57;UBERON:0007135!1.70e-94!57;UBERON:0002616!2.65e-78!59;UBERON:0001017!4.77e-78!82;UBERON:0005743!4.54e-77!86;UBERON:0002780!2.19e-73!41;UBERON:0001890!2.19e-73!41;UBERON:0006240!2.19e-73!41;UBERON:0000073!4.16e-72!94;UBERON:0001016!4.16e-72!94;UBERON:0000955!6.80e-72!69;UBERON:0006238!6.80e-72!69;UBERON:0003080!1.83e-71!42;UBERON:0003075!7.93e-68!86;UBERON:0007284!7.93e-68!86;UBERON:0002346!2.58e-64!90;UBERON:0001893!2.34e-63!34;UBERON:0002020!4.54e-63!34;UBERON:0003528!4.54e-63!34;UBERON:0002791!1.83e-60!33;UBERON:0007023!6.67e-59!115;UBERON:0001869!1.41e-57!32;UBERON:0003056!1.24e-49!61;UBERON:0002619!6.24e-40!22;UBERON:0000033!6.73e-40!123;UBERON:0000956!1.28e-38!25;UBERON:0000203!1.28e-38!25;UBERON:0000153!1.55e-37!129;UBERON:0007811!1.55e-37!129;UBERON:0004121!3.83e-35!169;UBERON:0001950!1.09e-34!20;UBERON:0000924!4.66e-34!173;UBERON:0006601!4.66e-34!173;UBERON:0002420!4.45e-27!9;UBERON:0007245!4.45e-27!9;UBERON:0010009!4.45e-27!9;UBERON:0010011!4.45e-27!9;UBERON:0000454!4.45e-27!9;UBERON:0002308!5.19e-27!9;UBERON:0000125!5.19e-27!9;UBERON:0003076!7.93e-23!15;UBERON:0003057!7.93e-23!15;UBERON:0000025!2.08e-22!194;UBERON:0009663!2.55e-21!7;UBERON:0002298!6.06e-19!8;UBERON:0004732!2.74e-18!13;UBERON:0004111!7.95e-16!241;UBERON:0000349!1.31e-15!5;UBERON:0004733!1.39e-15!12;UBERON:0002028!1.39e-15!12;UBERON:0007277!1.39e-15!12;UBERON:0001871!7.98e-14!7;UBERON:0000477!3.22e-13!286;UBERON:0000200!4.01e-13!6;UBERON:0000483!8.33e-13!309;UBERON:0000369!1.42e-12!4;UBERON:0002435!1.42e-12!4;UBERON:0000204!1.42e-12!4;UBERON:0010082!1.42e-12!4;UBERON:0000119!1.44e-12!312;UBERON:0001894!3.42e-11!7;UBERON:0006222!3.42e-11!7;UBERON:0000064!1.09e-10!219;UBERON:0001872!1.59e-10!5;UBERON:0000475!1.71e-10!365;UBERON:0000988!2.28e-10!3;UBERON:0001896!2.28e-10!3;UBERON:0005290!2.28e-10!3;UBERON:0010096!2.28e-10!3;UBERON:0002021!2.85e-10!5;UBERON:0006331!3.30e-10!3;UBERON:0002771!4.36e-10!3;UBERON:0005383!7.11e-10!3;UBERON:0005382!7.11e-10!3;UBERON:0002240!1.22e-09!3;UBERON:0005174!1.35e-09!5;UBERON:0001137!1.35e-09!5;UBERON:0002680!1.96e-08!9;UBERON:0001895!1.96e-08!9;UBERON:0010092!1.96e-08!9;UBERON:0005162!5.87e-08!2;UBERON:0000122!5.87e-08!2;UBERON:0001897!8.13e-08!2;UBERON:0001875!1.16e-07!2;UBERON:0006514!1.16e-07!2;UBERON:0000062!1.62e-07!511;UBERON:0001876!1.87e-07!2;UBERON:0002148!2.18e-07!2;UBERON:0009662!2.18e-07!2;UBERON:0001873!3.17e-07!2;UBERON:0010122!3.17e-07!2;UBERON:0001954!3.94e-07!2;UBERON:0003022!3.94e-07!2;UBERON:0002421!3.94e-07!2;UBERON:0002600!3.94e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.08e-78;34!UBERON:0003528;6.09e-75;34!UBERON:0002020;6.09e-75;34!UBERON:0001869;1.19e-72;32!UBERON:0002791;1.25e-72;32!UBERON:0002780;1.62e-66;41!UBERON:0001890;1.62e-66;41!UBERON:0002619;1.87e-61;22!UBERON:0000073;2.91e-60;53!UBERON:0002616;2.91e-60;53!UBERON:0000956;6.99e-54;25!UBERON:0000203;6.99e-54;25!UBERON:0001950;2.89e-53;20!UBERON:0000125;1.15e-40;9!UBERON:0002308;1.15e-40;9!UBERON:0002420;1.45e-40;9!UBERON:0007245;1.45e-40;9!UBERON:0010009;1.45e-40;9!UBERON:0010011;1.45e-40;9!UBERON:0000454;1.45e-40;9!UBERON:0000955;1.69e-38;68!UBERON:0001017;7.00e-37;75!UBERON:0009663;7.22e-32;7!UBERON:0001016;4.86e-29;83!UBERON:0002298;4.54e-28;6!UBERON:0000349;5.59e-23;5!UBERON:0004732;2.94e-22;13!UBERON:0000200;2.21e-19;6!UBERON:0007023;2.59e-19;114!UBERON:0000369;2.21e-18;4!UBERON:0002435;2.21e-18;4!UBERON:0000204;2.21e-18;4!UBERON:0004733;2.22e-18;12!UBERON:0002028;2.22e-18;12!UBERON:0001871;9.76e-17;6!UBERON:0001872;1.22e-15;5!UBERON:0002021;5.43e-15;5!UBERON:0000988;6.16e-15;3!UBERON:0001896;6.61e-15;3!UBERON:0005290;6.61e-15;3!UBERON:0005383;2.64e-14;3!UBERON:0005382;2.64e-14;3!UBERON:0011216;2.57e-12;132!UBERON:0005162;2.50e-11;2!UBERON:0000122;2.50e-11;2!UBERON:0001897;4.32e-11;2!UBERON:0010225;4.32e-11;2!UBERON:0001875;7.22e-11;2!UBERON:0006514;7.22e-11;2!UBERON:0002148;1.56e-10;2!UBERON:0006331;1.56e-10;2!UBERON:0009662;1.56e-10;2!UBERON:0002771;1.98e-10;2!UBERON:0001876;1.98e-10;2!UBERON:0001873;3.25e-10;2!UBERON:0001954;3.25e-10;2!UBERON:0003022;3.25e-10;2!UBERON:0002421;3.25e-10;2!UBERON:0002600;3.25e-10;2!UBERON:0010314;6.56e-10;132!UBERON:0002680;1.64e-08;9!UBERON:0001895;1.64e-08;9!UBERON:0001870;4.40e-07;3!UBERON:0001894;5.70e-07;7!UBERON:0002240;7.08e-07;3!UBERON:0005174;7.08e-07;3!UBERON:0001137;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.92e-118,56;UBERON:0005068,9.92e-118,56;UBERON:0006241,9.92e-118,56;UBERON:0007135,9.92e-118,56;UBERON:0000073,7.11e-112,53;UBERON:0002616,7.11e-112,53;UBERON:0000955,5.11e-95,68;UBERON:0006238,5.11e-95,68;UBERON:0002780,4.34e-94,41;UBERON:0001890,4.34e-94,41;UBERON:0003080,4.34e-94,41;UBERON:0006240,4.34e-94,41;UBERON:0001893,4.61e-91,34;UBERON:0003528,1.24e-90,34;UBERON:0002020,1.24e-90,34;UBERON:0001017,9.28e-88,81;UBERON:0003075,3.70e-83,82;UBERON:0007284,3.70e-83,82;UBERON:0001016,7.20e-83,89;UBERON:0001869,2.63e-82,32;UBERON:0002791,3.89e-82,32;UBERON:0002346,5.49e-79,86;UBERON:0003056,2.59e-66,61;UBERON:0007023,1.71e-65,114;UBERON:0010371,3.83e-64,104;UBERON:0002619,3.10e-61,22;UBERON:0000956,1.09e-53,25;UBERON:0000203,1.09e-53,25;UBERON:0001950,3.61e-53,20;UBERON:0010314,6.86e-52,132;UBERON:0002420,1.53e-40,9;UBERON:0007245,1.53e-40,9;UBERON:0010009,1.53e-40,9;UBERON:0010011,1.53e-40,9;UBERON:0000454,1.53e-40,9;UBERON:0000125,1.93e-40,9;UBERON:0002308,1.93e-40,9;UBERON:0004121,3.53e-40,171;UBERON:0000924,3.53e-40,171;UBERON:0006601,3.53e-40,171;UBERON:0009663,1.01e-31,7;UBERON:0011216,9.58e-31,223;UBERON:0000025,2.13e-29,192;UBERON:0002298,3.36e-28,6;UBERON:0003076,1.01e-23,15;UBERON:0003057,1.01e-23,15;UBERON:0000349,5.48e-23,5;UBERON:0004732,2.45e-22,13;UBERON:0004111,5.44e-22,240;UBERON:0000200,2.13e-19,6;UBERON:0004733,1.87e-18,12;UBERON:0002028,1.87e-18,12;UBERON:0007277,1.87e-18,12;UBERON:0000369,2.37e-18,4;UBERON:0002435,2.37e-18,4;UBERON:0000204,2.37e-18,4;UBERON:0010082,2.37e-18,4;UBERON:0000483,8.56e-17,306;UBERON:0001871,9.63e-17,6;UBERON:0000119,1.49e-16,309;UBERON:0001872,1.99e-15,5;UBERON:0002021,4.87e-15,5;UBERON:0000988,5.48e-15,3;UBERON:0001896,5.48e-15,3;UBERON:0005290,5.48e-15,3;UBERON:0010096,5.48e-15,3;UBERON:0005383,3.11e-14,3;UBERON:0005382,3.11e-14,3;UBERON:0005162,2.57e-11,2;UBERON:0000122,2.57e-11,2;UBERON:0001897,4.22e-11,2;UBERON:0010225,4.22e-11,2;UBERON:0001875,7.23e-11,2;UBERON:0006514,7.23e-11,2;UBERON:0001876,1.49e-10,2;UBERON:0002148,1.89e-10,2;UBERON:0006331,1.89e-10,2;UBERON:0009662,1.89e-10,2;UBERON:0002771,2.29e-10,2;UBERON:0001873,3.34e-10,2;UBERON:0010122,3.34e-10,2;UBERON:0001954,4.63e-10,2;UBERON:0003022,4.63e-10,2;UBERON:0002421,4.63e-10,2;UBERON:0002600,4.63e-10,2;UBERON:0002680,1.56e-08,9;UBERON:0001895,1.56e-08,9;UBERON:0010092,1.56e-08,9;UBERON:0000923,1.84e-07,560;UBERON:0010316,1.84e-07,560;UBERON:0005291,1.84e-07,560;UBERON:0006598,1.84e-07,560;UBERON:0010317,1.84e-07,560;UBERON:0002532,1.84e-07,560;UBERON:0002050,2.38e-07,564;UBERON:0001870,4.34e-07,3;UBERON:0001894,5.88e-07,7;UBERON:0006222,5.88e-07,7;UBERON:0002240,5.90e-07,3;UBERON:0005174,5.90e-07,3;UBERON:0001137,5.90e-07,3;UBERON:0005423,6.88e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,1.82870241333667,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,2.50473865036998,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.32656082487949,1.52581736317083,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,6.20090423422229,0,3.04543779442941,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15256706249988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,5.06549901900374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,2.38568906942791,1.0896272488926,0,0,0,0,0,1.64023802976667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,2.51241943311111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34228891392159,1.8778639605975,2.29363678276028,1.88579387612649,4.22255540001407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.594719339945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60573062741149,1.41696576325585,1.59633859057151,2.87162909937057,0,2.21303207885497,2.42213468447777,7.13847101295772,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70150338473579,4.68646859168308,1.2401207790071,3.10737469950143,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,2.71878931907327,2.10472875401117,0,0,0,1.41404030924402,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,1.48523200163543,0.4226557275834,0,0,0,0,0,0,0,0,0,2.15009374727177,0,2.24371917630019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,5.68881477240424,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p7@TRAF1 | |||
}} |
Latest revision as of 19:59, 24 September 2015
Short description: | p7@TRAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRAF1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000546084, NM_001190947, uc011lyg.1_5end |
EntrezGene: | TRAF1 |
HGNC: | 12031 |
UniProt: | B4DJ77Q13077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data