FFCP PHASE1:Hg19::chr17:42983891..42983900,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42983891..42983900,- to FFCP PHASE1:Hg19::chr17:42983891..42983900,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_U92979_5end | |||
|cluster_id=chr17:42983891..42983900,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_31_at_GFAP_5end | |||
|id=chr17:42983891..42983900,- | |||
|ontology_enrichment_celltype=CL:0002605!5.27e-12!3;CL:0000128!9.94e-09!7;CL:0000126!9.94e-09!7;CL:0000127!9.94e-09!7;CL:0002453!9.94e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.66e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.93e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.64e-22;3!UBERON:0003057;2.64e-22;3!UBERON:0006601;2.07e-11;82!UBERON:0006222;1.31e-08;1!UBERON:0005425;2.02e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-115!57;UBERON:0005068!1.16e-115!57;UBERON:0006241!1.16e-115!57;UBERON:0007135!1.16e-115!57;UBERON:0001017!2.94e-101!82;UBERON:0005743!3.49e-96!86;UBERON:0002616!3.81e-95!59;UBERON:0000073!2.49e-90!94;UBERON:0001016!2.49e-90!94;UBERON:0000955!1.02e-87!69;UBERON:0006238!1.02e-87!69;UBERON:0002780!2.67e-82!41;UBERON:0001890!2.67e-82!41;UBERON:0006240!2.67e-82!41;UBERON:0002020!1.72e-81!34;UBERON:0003528!1.72e-81!34;UBERON:0001893!6.66e-81!34;UBERON:0003080!3.37e-80!42;UBERON:0002791!8.88e-78!33;UBERON:0003075!1.55e-77!86;UBERON:0007284!1.55e-77!86;UBERON:0002346!1.10e-73!90;UBERON:0001869!1.14e-73!32;UBERON:0000956!1.15e-56!25;UBERON:0000203!1.15e-56!25;UBERON:0007023!3.10e-56!115;UBERON:0003056!3.75e-53!61;UBERON:0000033!3.76e-48!123;UBERON:0002619!1.02e-46!22;UBERON:0004121!2.36e-46!169;UBERON:0000153!1.73e-45!129;UBERON:0007811!1.73e-45!129;UBERON:0000924!4.64e-45!173;UBERON:0006601!4.64e-45!173;UBERON:0001950!4.34e-40!20;UBERON:0003076!9.14e-35!15;UBERON:0003057!9.14e-35!15;UBERON:0000025!6.68e-29!194;UBERON:0004732!1.02e-27!13;UBERON:0002308!7.64e-26!9;UBERON:0000125!7.64e-26!9;UBERON:0002420!2.57e-25!9;UBERON:0007245!2.57e-25!9;UBERON:0010009!2.57e-25!9;UBERON:0010011!2.57e-25!9;UBERON:0000454!2.57e-25!9;UBERON:0004733!2.76e-24!12;UBERON:0002028!2.76e-24!12;UBERON:0007277!2.76e-24!12;UBERON:0002298!2.36e-23!8;UBERON:0004111!2.58e-21!241;UBERON:0000200!4.68e-21!6;UBERON:0009663!1.05e-18!7;UBERON:0000349!1.40e-18!5;UBERON:0000477!1.68e-17!286;UBERON:0001871!5.10e-16!7;UBERON:0000483!2.10e-15!309;UBERON:0000064!2.51e-15!219;UBERON:0000119!3.71e-15!312;UBERON:0000369!9.10e-15!4;UBERON:0002435!9.10e-15!4;UBERON:0000204!9.10e-15!4;UBERON:0010082!9.10e-15!4;UBERON:0002680!1.52e-14!9;UBERON:0001895!1.52e-14!9;UBERON:0010092!1.52e-14!9;UBERON:0002240!6.69e-13!3;UBERON:0006331!7.82e-13!3;UBERON:0001896!1.45e-12!3;UBERON:0005290!1.45e-12!3;UBERON:0010096!1.45e-12!3;UBERON:0000475!2.25e-12!365;UBERON:0000988!2.88e-12!3;UBERON:0001872!1.13e-11!5;UBERON:0002771!1.15e-11!3;UBERON:0005383!1.19e-11!3;UBERON:0005382!1.19e-11!3;UBERON:0002148!4.71e-09!2;UBERON:0009662!4.71e-09!2;UBERON:0005162!5.51e-09!2;UBERON:0000122!5.51e-09!2;UBERON:0001897!6.94e-09!2;UBERON:0001954!9.81e-09!2;UBERON:0003022!9.81e-09!2;UBERON:0002421!9.81e-09!2;UBERON:0002600!9.81e-09!2;UBERON:0001873!1.67e-08!2;UBERON:0010122!1.67e-08!2;UBERON:0001876!1.94e-08!2;UBERON:0001870!4.87e-08!2;UBERON:0005174!6.89e-08!5;UBERON:0001137!6.89e-08!5;UBERON:0000062!1.18e-07!511;UBERON:0002021!3.63e-07!5;UBERON:0000481!3.89e-07!347;UBERON:0000923!4.71e-07!604;UBERON:0005291!4.71e-07!604;UBERON:0006598!4.71e-07!604;UBERON:0002532!4.71e-07!604;UBERON:0002050!5.06e-07!605;UBERON:0005423!5.06e-07!605;UBERON:0000922!8.21e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.33e-37;53!UBERON:0002616;4.33e-37;53!UBERON:0002780;4.95e-32;41!UBERON:0001890;4.95e-32;41!UBERON:0002298;3.99e-29;6!UBERON:0003528;2.89e-26;34!UBERON:0002020;2.89e-26;34!UBERON:0001893;1.11e-25;34!UBERON:0004732;1.69e-25;13!UBERON:0002791;9.72e-25;32!UBERON:0002240;2.64e-22;3!UBERON:0005174;2.64e-22;3!UBERON:0001137;2.64e-22;3!UBERON:0001869;5.89e-22;32!UBERON:0001896;1.01e-21;3!UBERON:0005290;1.01e-21;3!UBERON:0001017;3.44e-21;75!UBERON:0000955;9.81e-21;68!UBERON:0004733;1.93e-20;12!UBERON:0002028;1.93e-20;12!UBERON:0000956;7.61e-20;25!UBERON:0000203;7.61e-20;25!UBERON:0000125;3.73e-19;9!UBERON:0002308;3.73e-19;9!UBERON:0001016;6.15e-18;83!UBERON:0002148;4.79e-15;2!UBERON:0006331;4.79e-15;2!UBERON:0009662;4.79e-15;2!UBERON:0001897;8.69e-15;2!UBERON:0001954;8.69e-15;2!UBERON:0005162;8.69e-15;2!UBERON:0000122;8.69e-15;2!UBERON:0003022;8.69e-15;2!UBERON:0002421;8.69e-15;2!UBERON:0010225;8.69e-15;2!UBERON:0002600;8.69e-15;2!UBERON:0002619;1.01e-13;22!UBERON:0000349;6.63e-13;5!UBERON:0002420;2.10e-12;9!UBERON:0007245;2.10e-12;9!UBERON:0010009;2.10e-12;9!UBERON:0010011;2.10e-12;9!UBERON:0000454;2.10e-12;9!UBERON:0007023;2.97e-11;114!UBERON:0000988;2.47e-10;3!UBERON:0001894;1.38e-09;7!UBERON:0009663;1.93e-09;7!UBERON:0011216;1.14e-08;132!UBERON:0002038;1.31e-08;1!UBERON:0009661;1.31e-08;1!UBERON:0002950;1.31e-08;1!UBERON:0001891;1.31e-08;1!UBERON:0003112;2.02e-08;1!UBERON:0000941;2.02e-08;1!UBERON:0001785;2.02e-08;1!UBERON:0002464;2.02e-08;1!UBERON:0004904;2.02e-08;1!UBERON:0011158;2.02e-08;1!UBERON:0001021;2.02e-08;1!UBERON:0003128;2.02e-08;1!UBERON:0001703;2.02e-08;1!UBERON:0002241;2.02e-08;1!UBERON:0002336;4.56e-08;1!UBERON:0011215;4.56e-08;1!UBERON:0001018;4.56e-08;1!UBERON:0002473;4.56e-08;1!UBERON:0005340;4.56e-08;1!UBERON:0003544;4.56e-08;1!UBERON:0005970;4.56e-08;1!UBERON:0002316;4.56e-08;1!UBERON:0001020;4.56e-08;1!UBERON:0002437;4.56e-08;1!UBERON:0001950;6.24e-08;20!UBERON:0002784;7.83e-08;4!UBERON:0002680;1.81e-07;9!UBERON:0001895;1.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.66e-71,56;UBERON:0005068,2.66e-71,56;UBERON:0006241,2.66e-71,56;UBERON:0007135,2.66e-71,56;UBERON:0000073,1.82e-57,53;UBERON:0002616,1.82e-57,53;UBERON:0001017,4.12e-56,81;UBERON:0001016,2.36e-54,89;UBERON:0003075,7.06e-52,82;UBERON:0007284,7.06e-52,82;UBERON:0002346,2.72e-49,86;UBERON:0000955,8.22e-48,68;UBERON:0006238,8.22e-48,68;UBERON:0010371,4.34e-40,104;UBERON:0002780,1.26e-38,41;UBERON:0001890,1.26e-38,41;UBERON:0003080,1.26e-38,41;UBERON:0006240,1.26e-38,41;UBERON:0003076,1.74e-36,15;UBERON:0003057,1.74e-36,15;UBERON:0003528,1.19e-35,34;UBERON:0002020,1.19e-35,34;UBERON:0007023,1.65e-33,114;UBERON:0010314,1.94e-33,132;UBERON:0001893,1.80e-30,34;UBERON:0002298,3.78e-29,6;UBERON:0003056,1.08e-28,61;UBERON:0002791,1.55e-27,32;UBERON:0004121,1.30e-26,171;UBERON:0000924,1.30e-26,171;UBERON:0006601,1.30e-26,171;UBERON:0004732,1.66e-25,13;UBERON:0001869,6.40e-23,32;UBERON:0002240,3.28e-22,3;UBERON:0005174,3.28e-22,3;UBERON:0001137,3.28e-22,3;UBERON:0001896,1.35e-21,3;UBERON:0005290,1.35e-21,3;UBERON:0010096,1.35e-21,3;UBERON:0011216,4.70e-21,223;UBERON:0004733,2.11e-20,12;UBERON:0002028,2.11e-20,12;UBERON:0007277,2.11e-20,12;UBERON:0000956,8.17e-20,25;UBERON:0000203,8.17e-20,25;UBERON:0000125,2.97e-19,9;UBERON:0002308,2.97e-19,9;UBERON:0000025,5.86e-18,192;UBERON:0002148,3.37e-15,2;UBERON:0006331,3.37e-15,2;UBERON:0009662,3.37e-15,2;UBERON:0005162,4.47e-15,2;UBERON:0000122,4.47e-15,2;UBERON:0001897,6.82e-15,2;UBERON:0010225,6.82e-15,2;UBERON:0001954,1.28e-14,2;UBERON:0003022,1.28e-14,2;UBERON:0002421,1.28e-14,2;UBERON:0002600,1.28e-14,2;UBERON:0002619,1.05e-13,22;UBERON:0004111,1.79e-13,240;UBERON:0000349,9.99e-13,5;UBERON:0002420,2.34e-12,9;UBERON:0007245,2.34e-12,9;UBERON:0010009,2.34e-12,9;UBERON:0010011,2.34e-12,9;UBERON:0000454,2.34e-12,9;UBERON:0000483,1.11e-10,306;UBERON:0000119,1.56e-10,309;UBERON:0000988,1.96e-10,3;UBERON:0001894,1.29e-09,7;UBERON:0006222,1.29e-09,7;UBERON:0009663,1.88e-09,7;UBERON:0002038,1.22e-08,1;UBERON:0009661,1.22e-08,1;UBERON:0002950,1.22e-08,1;UBERON:0001891,1.22e-08,1;UBERON:0009616,1.22e-08,1;UBERON:0010286,1.22e-08,1;UBERON:0000941,1.63e-08,1;UBERON:0001785,1.63e-08,1;UBERON:0002464,1.63e-08,1;UBERON:0004904,1.63e-08,1;UBERON:0001021,1.63e-08,1;UBERON:0003902,1.63e-08,1;UBERON:0005425,1.63e-08,1;UBERON:0003112,2.33e-08,1;UBERON:0011158,2.33e-08,1;UBERON:0003128,2.33e-08,1;UBERON:0001703,2.33e-08,1;UBERON:0002241,2.33e-08,1;UBERON:0004761,2.33e-08,1;UBERON:0009617,2.33e-08,1;UBERON:0002336,2.89e-08,1;UBERON:0011215,2.89e-08,1;UBERON:0001018,2.89e-08,1;UBERON:0002473,2.89e-08,1;UBERON:0005340,2.89e-08,1;UBERON:0003544,2.89e-08,1;UBERON:0005970,2.89e-08,1;UBERON:0002316,2.89e-08,1;UBERON:0001020,2.89e-08,1;UBERON:0002437,2.89e-08,1;UBERON:0001950,5.87e-08,20;UBERON:0002784,6.94e-08,4;UBERON:0002680,1.75e-07,9;UBERON:0001895,1.75e-07,9;UBERON:0010092,1.75e-07,9 | |||
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|short_description=p31@GFAP | |||
}} | }} |
Latest revision as of 23:10, 24 September 2015
Short description: | p31@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -20bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.93e-10 | 3 |