FFCP PHASE1:Hg19::chr5:138211000..138211039,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26045 | |EntrezGene=26045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19409 | |HGNC=19409 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000523537_5end | |association_with_transcript=0bp_to_ENST00000523537_5end | ||
|cluster_id=chr5:138211000..138211039,- | |||
|description=CAGE_peak_1_at_LRRTM2_5end | |description=CAGE_peak_1_at_LRRTM2_5end | ||
|id=chr5:138211000..138211039,- | |id=chr5:138211000..138211039,- | ||
|ontology_enrichment_celltype=CL:0000133!2.53e-09!59;CL:0000221!8.46e-08!71;CL:0002319!8.17e-07!25 | |ontology_enrichment_celltype=CL:0000133!2.53e-09!59;CL:0000221!8.46e-08!71;CL:0002319!8.17e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.30e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.27e-20;82!UBERON:0006215;6.34e-08;3!UBERON:0006241;2.55e-07;3!UBERON:0003057;2.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.43e-58!82;UBERON:0000073!4.56e-58!94;UBERON:0001016!4.56e-58!94;UBERON:0005743!1.28e-57!86;UBERON:0000955!1.37e-51!69;UBERON:0006238!1.37e-51!69;UBERON:0001049!3.40e-50!57;UBERON:0005068!3.40e-50!57;UBERON:0006241!3.40e-50!57;UBERON:0007135!3.40e-50!57;UBERON:0002616!1.41e-44!59;UBERON:0002780!1.92e-42!41;UBERON:0001890!1.92e-42!41;UBERON:0006240!1.92e-42!41;UBERON:0003080!5.24e-41!42;UBERON:0003075!1.02e-36!86;UBERON:0007284!1.02e-36!86;UBERON:0002020!1.09e-35!34;UBERON:0003528!1.09e-35!34;UBERON:0001893!1.19e-35!34;UBERON:0002346!4.40e-35!90;UBERON:0000033!7.21e-35!123;UBERON:0000153!7.50e-35!129;UBERON:0007811!7.50e-35!129;UBERON:0002791!1.16e-34!33;UBERON:0001869!7.24e-34!32;UBERON:0003056!7.39e-32!61;UBERON:0004121!8.82e-32!169;UBERON:0000924!4.52e-31!173;UBERON:0006601!4.52e-31!173;UBERON:0000956!7.85e-27!25;UBERON:0000203!7.85e-27!25;UBERON:0002619!1.74e-24!22;UBERON:0007023!2.24e-24!115;UBERON:0001950!1.38e-22!20;UBERON:0000477!5.20e-11!286;UBERON:0002420!2.25e-10!9;UBERON:0007245!2.25e-10!9;UBERON:0010009!2.25e-10!9;UBERON:0010011!2.25e-10!9;UBERON:0000454!2.25e-10!9;UBERON:0003076!2.45e-10!15;UBERON:0003057!2.45e-10!15;UBERON:0002308!3.33e-10!9;UBERON:0000125!3.33e-10!9;UBERON:0000025!1.29e-09!194;UBERON:0004111!1.39e-09!241;UBERON:0001871!1.87e-09!7;UBERON:0000483!3.60e-09!309;UBERON:0000475!3.86e-09!365;UBERON:0000119!4.13e-09!312;UBERON:0004732!1.19e-08!13;UBERON:0009663!2.25e-08!7;UBERON:0000922!3.87e-08!612;UBERON:0001894!4.34e-08!7;UBERON:0006222!4.34e-08!7;UBERON:0000481!5.57e-08!347;UBERON:0000480!7.55e-08!626;UBERON:0004733!7.98e-08!12;UBERON:0002028!7.98e-08!12;UBERON:0007277!7.98e-08!12;UBERON:0000200!1.03e-07!6;UBERON:0000467!1.40e-07!625;UBERON:0000064!1.71e-07!219;UBERON:0000923!2.18e-07!604;UBERON:0005291!2.18e-07!604;UBERON:0006598!2.18e-07!604;UBERON:0002532!2.18e-07!604;UBERON:0002050!2.66e-07!605;UBERON:0005423!2.66e-07!605;UBERON:0000468!5.03e-07!659 | |ontology_enrichment_uberon=UBERON:0001017!2.43e-58!82;UBERON:0000073!4.56e-58!94;UBERON:0001016!4.56e-58!94;UBERON:0005743!1.28e-57!86;UBERON:0000955!1.37e-51!69;UBERON:0006238!1.37e-51!69;UBERON:0001049!3.40e-50!57;UBERON:0005068!3.40e-50!57;UBERON:0006241!3.40e-50!57;UBERON:0007135!3.40e-50!57;UBERON:0002616!1.41e-44!59;UBERON:0002780!1.92e-42!41;UBERON:0001890!1.92e-42!41;UBERON:0006240!1.92e-42!41;UBERON:0003080!5.24e-41!42;UBERON:0003075!1.02e-36!86;UBERON:0007284!1.02e-36!86;UBERON:0002020!1.09e-35!34;UBERON:0003528!1.09e-35!34;UBERON:0001893!1.19e-35!34;UBERON:0002346!4.40e-35!90;UBERON:0000033!7.21e-35!123;UBERON:0000153!7.50e-35!129;UBERON:0007811!7.50e-35!129;UBERON:0002791!1.16e-34!33;UBERON:0001869!7.24e-34!32;UBERON:0003056!7.39e-32!61;UBERON:0004121!8.82e-32!169;UBERON:0000924!4.52e-31!173;UBERON:0006601!4.52e-31!173;UBERON:0000956!7.85e-27!25;UBERON:0000203!7.85e-27!25;UBERON:0002619!1.74e-24!22;UBERON:0007023!2.24e-24!115;UBERON:0001950!1.38e-22!20;UBERON:0000477!5.20e-11!286;UBERON:0002420!2.25e-10!9;UBERON:0007245!2.25e-10!9;UBERON:0010009!2.25e-10!9;UBERON:0010011!2.25e-10!9;UBERON:0000454!2.25e-10!9;UBERON:0003076!2.45e-10!15;UBERON:0003057!2.45e-10!15;UBERON:0002308!3.33e-10!9;UBERON:0000125!3.33e-10!9;UBERON:0000025!1.29e-09!194;UBERON:0004111!1.39e-09!241;UBERON:0001871!1.87e-09!7;UBERON:0000483!3.60e-09!309;UBERON:0000475!3.86e-09!365;UBERON:0000119!4.13e-09!312;UBERON:0004732!1.19e-08!13;UBERON:0009663!2.25e-08!7;UBERON:0000922!3.87e-08!612;UBERON:0001894!4.34e-08!7;UBERON:0006222!4.34e-08!7;UBERON:0000481!5.57e-08!347;UBERON:0000480!7.55e-08!626;UBERON:0004733!7.98e-08!12;UBERON:0002028!7.98e-08!12;UBERON:0007277!7.98e-08!12;UBERON:0000200!1.03e-07!6;UBERON:0000467!1.40e-07!625;UBERON:0000064!1.71e-07!219;UBERON:0000923!2.18e-07!604;UBERON:0005291!2.18e-07!604;UBERON:0006598!2.18e-07!604;UBERON:0002532!2.18e-07!604;UBERON:0002050!2.66e-07!605;UBERON:0005423!2.66e-07!605;UBERON:0000468!5.03e-07!659 | ||
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| ||
|short_description=p1@LRRTM2 | |short_description=p1@LRRTM2 | ||
}} | }} |
Latest revision as of 23:39, 24 September 2015
Short description: | p1@LRRTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRTM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000523537_5end |
EntrezGene: | LRRTM2 |
HGNC: | 19409 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.30e-07 | 8 |