FFCP PHASE1:Hg19::chr1:160103656..160103669,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:160103656..160103669,+ | |||
|coexpression_cluster_id=C876 | |||
|description=CAGE_peak_at_chr1:160103656..160103669,+ | |description=CAGE_peak_at_chr1:160103656..160103669,+ | ||
|id=chr1:160103656..160103669,+ | |id=chr1:160103656..160103669,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.64e-18;82!UBERON:0006241;8.50e-08;3!UBERON:0003057;8.50e-08;3!UBERON:0006215;4.26e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.92e-89!57;UBERON:0005068!7.92e-89!57;UBERON:0006241!7.92e-89!57;UBERON:0007135!7.92e-89!57;UBERON:0002616!8.68e-74!59;UBERON:0007023!4.09e-73!115;UBERON:0000955!1.24e-72!69;UBERON:0006238!1.24e-72!69;UBERON:0001017!6.67e-71!82;UBERON:0005743!6.67e-70!86;UBERON:0002780!5.38e-69!41;UBERON:0001890!5.38e-69!41;UBERON:0006240!5.38e-69!41;UBERON:0003080!3.94e-67!42;UBERON:0003075!1.40e-62!86;UBERON:0007284!1.40e-62!86;UBERON:0000073!5.40e-62!94;UBERON:0001016!5.40e-62!94;UBERON:0002346!3.50e-59!90;UBERON:0001893!2.23e-58!34;UBERON:0002020!5.15e-58!34;UBERON:0003528!5.15e-58!34;UBERON:0002791!3.80e-56!33;UBERON:0001869!1.14e-53!32;UBERON:0002619!7.04e-49!22;UBERON:0000033!3.32e-46!123;UBERON:0003056!6.65e-46!61;UBERON:0000153!2.85e-45!129;UBERON:0007811!2.85e-45!129;UBERON:0001950!7.19e-44!20;UBERON:0000956!1.90e-42!25;UBERON:0000203!1.90e-42!25;UBERON:0004121!1.61e-35!169;UBERON:0000924!2.37e-34!173;UBERON:0006601!2.37e-34!173;UBERON:0000025!5.69e-22!194;UBERON:0003076!1.30e-21!15;UBERON:0003057!1.30e-21!15;UBERON:0001871!2.47e-19!7;UBERON:0004111!1.69e-18!241;UBERON:0002420!4.35e-17!9;UBERON:0007245!4.35e-17!9;UBERON:0010009!4.35e-17!9;UBERON:0010011!4.35e-17!9;UBERON:0000454!4.35e-17!9;UBERON:0002308!1.11e-16!9;UBERON:0000125!1.11e-16!9;UBERON:0004733!3.36e-15!12;UBERON:0002028!3.36e-15!12;UBERON:0007277!3.36e-15!12;UBERON:0000200!7.48e-15!6;UBERON:0000475!2.24e-14!365;UBERON:0000477!4.03e-14!286;UBERON:0004732!6.99e-14!13;UBERON:0000349!1.10e-13!5;UBERON:0000483!8.14e-13!309;UBERON:0009663!1.39e-12!7;UBERON:0000119!1.49e-12!312;UBERON:0002021!1.87e-12!5;UBERON:0002680!2.33e-12!9;UBERON:0001895!2.33e-12!9;UBERON:0010092!2.33e-12!9;UBERON:0001894!1.07e-11!7;UBERON:0006222!1.07e-11!7;UBERON:0002298!4.42e-11!8;UBERON:0000064!7.60e-11!219;UBERON:0000369!2.18e-10!4;UBERON:0002435!2.18e-10!4;UBERON:0000204!2.18e-10!4;UBERON:0010082!2.18e-10!4;UBERON:0000062!1.27e-09!511;UBERON:0000481!2.37e-09!347;UBERON:0001872!1.01e-08!5;UBERON:0002240!1.46e-08!3;UBERON:0002771!2.71e-08!3;UBERON:0006331!3.91e-08!3;UBERON:0000988!4.74e-08!3;UBERON:0005383!5.75e-08!3;UBERON:0005382!5.75e-08!3;UBERON:0000468!3.25e-07!659;UBERON:0000922!5.72e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.83e-68;34!UBERON:0002619;7.63e-65;22!UBERON:0002791;4.44e-64;32!UBERON:0001869;1.28e-62;32!UBERON:0003528;2.95e-60;34!UBERON:0002020;2.95e-60;34!UBERON:0002780;4.44e-58;41!UBERON:0001890;4.44e-58;41!UBERON:0000956;7.05e-57;25!UBERON:0000203;7.05e-57;25!UBERON:0001950;1.19e-55;20!UBERON:0000073;3.92e-52;53!UBERON:0002616;3.92e-52;53!UBERON:0001017;3.76e-30;75!UBERON:0000955;4.08e-30;68!UBERON:0001016;4.88e-26;83!UBERON:0002420;3.70e-25;9!UBERON:0007245;3.70e-25;9!UBERON:0010009;3.70e-25;9!UBERON:0010011;3.70e-25;9!UBERON:0000454;3.70e-25;9!UBERON:0000349;6.62e-25;5!UBERON:0000125;1.80e-18;9!UBERON:0002308;1.80e-18;9!UBERON:0001871;3.59e-17;6!UBERON:0009663;6.72e-17;7!UBERON:0001872;6.16e-16;5!UBERON:0002021;1.25e-15;5!UBERON:0004733;1.22e-13;12!UBERON:0002028;1.22e-13;12!UBERON:0000200;2.65e-13;6!UBERON:0007023;5.79e-13;114!UBERON:0002298;6.05e-13;6!UBERON:0004732;1.51e-12;13!UBERON:0011216;7.54e-12;132!UBERON:0001954;2.01e-11;2!UBERON:0003022;2.01e-11;2!UBERON:0002421;2.01e-11;2!UBERON:0002600;2.01e-11;2!UBERON:0000369;2.80e-11;4!UBERON:0002435;2.80e-11;4!UBERON:0000204;2.80e-11;4!UBERON:0001876;1.29e-10;2!UBERON:0001897;1.29e-10;2!UBERON:0010225;1.29e-10;2!UBERON:0010314;1.46e-08;132!UBERON:0002680;2.10e-08;9!UBERON:0001895;2.10e-08;9!UBERON:0002240;8.50e-08;3!UBERON:0005174;8.50e-08;3!UBERON:0001137;8.50e-08;3!UBERON:0001870;1.30e-07;3!UBERON:0001896;1.66e-07;3!UBERON:0005290;1.66e-07;3!UBERON:0000988;4.26e-07;3!UBERON:0005383;4.26e-07;3!UBERON:0005382;4.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.87e-97,56;UBERON:0005068,5.87e-97,56;UBERON:0006241,5.87e-97,56;UBERON:0007135,5.87e-97,56;UBERON:0000073,2.22e-90,53;UBERON:0002616,2.22e-90,53;UBERON:0001893,1.25e-80,34;UBERON:0002780,6.70e-78,41;UBERON:0001890,6.70e-78,41;UBERON:0003080,6.70e-78,41;UBERON:0006240,6.70e-78,41;UBERON:0000955,2.83e-77,68;UBERON:0006238,2.83e-77,68;UBERON:0003528,5.97e-74,34;UBERON:0002020,5.97e-74,34;UBERON:0001017,1.48e-72,81;UBERON:0003075,1.72e-72,82;UBERON:0007284,1.72e-72,82;UBERON:0002791,3.22e-72,32;UBERON:0001869,4.51e-72,32;UBERON:0002346,7.99e-69,86;UBERON:0001016,9.51e-65,89;UBERON:0002619,1.30e-64,22;UBERON:0000956,1.13e-56,25;UBERON:0000203,1.13e-56,25;UBERON:0010371,8.93e-56,104;UBERON:0001950,1.98e-55,20;UBERON:0003056,8.68e-55,61;UBERON:0007023,6.95e-51,114;UBERON:0010314,3.97e-45,132;UBERON:0004121,7.84e-35,171;UBERON:0000924,7.84e-35,171;UBERON:0006601,7.84e-35,171;UBERON:0000025,2.86e-25,192;UBERON:0000349,3.97e-25,5;UBERON:0002420,5.58e-25,9;UBERON:0007245,5.58e-25,9;UBERON:0010009,5.58e-25,9;UBERON:0010011,5.58e-25,9;UBERON:0000454,5.58e-25,9;UBERON:0011216,2.34e-23,223;UBERON:0003076,1.60e-19,15;UBERON:0003057,1.60e-19,15;UBERON:0004111,9.30e-19,240;UBERON:0000125,2.88e-18,9;UBERON:0002308,2.88e-18,9;UBERON:0001871,3.05e-17,6;UBERON:0009663,1.22e-16,7;UBERON:0000483,1.90e-16,306;UBERON:0000119,3.26e-16,309;UBERON:0001872,7.64e-16,5;UBERON:0002021,1.77e-15,5;UBERON:0004733,8.36e-14,12;UBERON:0002028,8.36e-14,12;UBERON:0007277,8.36e-14,12;UBERON:0000200,3.60e-13,6;UBERON:0002298,4.36e-13,6;UBERON:0004732,1.07e-12,13;UBERON:0001954,2.01e-11,2;UBERON:0003022,2.01e-11,2;UBERON:0002421,2.01e-11,2;UBERON:0002600,2.01e-11,2;UBERON:0000369,3.60e-11,4;UBERON:0002435,3.60e-11,4;UBERON:0000204,3.60e-11,4;UBERON:0010082,3.60e-11,4;UBERON:0001897,8.96e-11,2;UBERON:0010225,8.96e-11,2;UBERON:0001876,9.41e-11,2;UBERON:0002680,1.65e-08,9;UBERON:0001895,1.65e-08,9;UBERON:0010092,1.65e-08,9;UBERON:0002240,8.52e-08,3;UBERON:0005174,8.52e-08,3;UBERON:0001137,8.52e-08,3;UBERON:0001896,1.44e-07,3;UBERON:0005290,1.44e-07,3;UBERON:0010096,1.44e-07,3;UBERON:0001870,1.81e-07,3;UBERON:0000923,2.55e-07,560;UBERON:0010316,2.55e-07,560;UBERON:0005291,2.55e-07,560;UBERON:0006598,2.55e-07,560;UBERON:0010317,2.55e-07,560;UBERON:0002532,2.55e-07,560;UBERON:0002050,3.28e-07,564;UBERON:0000988,3.53e-07,3;UBERON:0005383,6.01e-07,3;UBERON:0005382,6.01e-07,3;UBERON:0005423,9.24e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,1.9882952955326,2.11004124615769,0,0,0,0.597743964753209,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.5677537021303,1.52581736317083,1.99042667876204,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22423738836234,0.802577647298789,0.468528891450678,0,0,0,0,1.20990716048664,0.61214552326098,0.568679216656392,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,2.089256266544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36905378891993,0,0,0,0,2.06244381610515,0,0.798716001995964,0.858452096273142,0,0.134366944973453,0,0,0,0,0,0,0,3.18091875923721,3.13267834056624,0,0,0,0,0,2.55148137963704,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.71902382265497,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,2.003054891304,0,1.77486482458964,4.03626619118992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.376481328569,2.8339315265117,2.07524016774297,1.23069818544453,0.252071696221718,1.10651603942749,1.93770774758221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68843961545987,0,2.06686796501184,2.40980078736846,1.64092442705466,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0,0,0,1.76721305739762,2.03895598044832,0,0,0,1.09980912941201,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47428837187895,1.12929087541872,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.785233868459781,8.02025280883132,2.113278637917,0,0,0,0,0,0,0,0,0.458729283404541,2.00675416412032,0,2.3117106664911,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0.535928260312357,1.65833887891756,2.68925789240928,0.639701945702943,0,0,0,0,0,0,0.870866991587845,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,1.9882952955326,2.11004124615769,0,0,0,0.597743964753209,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.5677537021303,1.52581736317083,1.99042667876204,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22423738836234,0.802577647298789,0.468528891450678,0,0,0,0,1.20990716048664,0.61214552326098,0.568679216656392,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,2.089256266544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36905378891993,0,0,0,0,2.06244381610515,0,0.798716001995964,0.858452096273142,0,0.134366944973453,0,0,0,0,0,0,0,3.18091875923721,3.13267834056624,0,0,0,0,0,2.55148137963704,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.71902382265497,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,2.003054891304,0,1.77486482458964,4.03626619118992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.376481328569,2.8339315265117,2.07524016774297,1.23069818544453,0.252071696221718,1.10651603942749,1.93770774758221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68843961545987,0,2.06686796501184,2.40980078736846,1.64092442705466,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0,0,0,1.76721305739762,2.03895598044832,0,0,0,1.09980912941201,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47428837187895,1.12929087541872,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.785233868459781,8.02025280883132,2.113278637917,0,0,0,0,0,0,0,0,0.458729283404541,2.00675416412032,0,2.3117106664911,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0.535928260312357,1.65833887891756,2.68925789240928,0.639701945702943,0,0,0,0,0,0,0.870866991587845,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:160103656..160103669,+ | |short_description=p@chr1:160103656..160103669,+ | ||
}} | }} |
Latest revision as of 23:14, 27 July 2015
Short description: | p@chr1:160103656..160103669, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160103656..160103669, + |
Coexpression cluster: | C876_skeletal_spinal_medulla_hippocampus_parietal_thalamus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data