FFCP PHASE1:Hg19::chr11:62474885..62474903,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62474885..62474903,-
|short_description=p5@BSCL2
|description=CAGE_peak_5_at_BSCL2_5end
|association_with_transcript=-15bp_to_ENST00000360796_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26580 | |EntrezGene=26580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15832 | |HGNC=15832 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAE4 | |UniProt=G3XAE4 | ||
|association_with_transcript=-15bp_to_ENST00000360796_5end | |||
|cluster_id=chr11:62474885..62474903,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_BSCL2_5end | |||
|id=chr11:62474885..62474903,- | |||
|ontology_enrichment_celltype=CL:0000047!7.84e-11!8;CL:0002319!5.34e-09!25;CL:0000133!1.68e-08!59;CL:0000540!1.82e-08!6;CL:0000031!1.82e-08!6;CL:0000404!1.82e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.81e-11;6!CL:0000404;1.81e-11;6!CL:0002319;1.54e-10;25!CL:0002322;8.88e-09;5!CL:0002321;2.95e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.30e-15,8;CL:0000540,1.80e-11,6;CL:0000031,1.80e-11,6;CL:0000404,1.80e-11,6;CL:0000133,3.51e-11,59;CL:0002319,1.51e-10,25;CL:0002322,8.80e-09,5;CL:0000221,3.56e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.13e-19;82!CL:0000031;1.81e-11;6!UBERON:0006215;2.83e-07;3!CL:0000133;7.87e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.49e-54;34!UBERON:0003528;3.32e-54;34!UBERON:0002020;3.32e-54;34!UBERON:0001869;4.71e-54;32!UBERON:0002791;1.33e-53;32!UBERON:0000073;1.52e-53;53!UBERON:0002616;1.52e-53;53!UBERON:0002780;2.08e-53;41!UBERON:0001890;2.08e-53;41!UBERON:0000956;7.61e-47;25!UBERON:0000203;7.61e-47;25!UBERON:0002619;5.87e-42;22!UBERON:0001950;3.66e-38;20!UBERON:0000955;1.94e-36;68!UBERON:0001017;1.89e-34;75!UBERON:0001016;1.77e-32;83!UBERON:0004732;5.52e-20;13!UBERON:0004733;1.05e-18;12!UBERON:0002028;1.05e-18;12!UBERON:0002420;1.38e-17;9!UBERON:0007245;1.38e-17;9!UBERON:0010009;1.38e-17;9!UBERON:0010011;1.38e-17;9!UBERON:0000454;1.38e-17;9!UBERON:0000125;1.44e-17;9!UBERON:0002308;1.44e-17;9!UBERON:0007023;8.99e-14;114!UBERON:0009663;9.19e-14;7!UBERON:0000200;9.70e-14;6!UBERON:0002680;9.97e-14;9!UBERON:0001895;9.97e-14;9!UBERON:0001894;1.89e-13;7!UBERON:0002298;1.90e-12;6!UBERON:0011216;3.71e-12;132!UBERON:0001872;3.04e-11;5!UBERON:0001871;3.06e-11;6!UBERON:0000349;3.55e-11;5!UBERON:0002021;3.78e-11;5!UBERON:0000369;2.54e-09;4!UBERON:0002435;2.54e-09;4!UBERON:0000204;2.54e-09;4!UBERON:0010314;7.63e-09;132!UBERON:0002784;2.08e-08;4!UBERON:0003296;2.25e-08;4!UBERON:0010133;2.25e-08;4!UBERON:0002037;3.55e-08;6!UBERON:0001870;1.42e-07;3!UBERON:0000988;1.92e-07;3!UBERON:0005383;2.25e-07;3!UBERON:0005382;2.25e-07;3 | |||
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| ||
|short_description=p5@BSCL2 | |||
}} | }} |
Latest revision as of 20:50, 18 September 2015
Short description: | p5@BSCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BSCL2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -15bp_to_ENST00000360796_5end |
EntrezGene: | BSCL2 |
HGNC: | 15832 |
UniProt: | G3XAE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.30e-15 | 8 |
neuron | 1.80e-11 | 6 |
neuroblast | 1.80e-11 | 6 |
electrically signaling cell | 1.80e-11 | 6 |
neurectodermal cell | 3.51e-11 | 59 |
neural cell | 1.51e-10 | 25 |
embryonic stem cell | 8.80e-09 | 5 |
ectodermal cell | 3.56e-08 | 72 |