FFCP PHASE1:Hg19::chr2:51259361..51259392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERL8 | |UniProt=E7ERL8 | ||
|association_with_transcript=-47bp_to_ENST00000401669_5end | |association_with_transcript=-47bp_to_ENST00000401669_5end | ||
|cluster_id=chr2:51259361..51259392,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_NRXN1_5end | |description=CAGE_peak_4_at_NRXN1_5end | ||
|id=chr2:51259361..51259392,- | |id=chr2:51259361..51259392,- | ||
|ontology_enrichment_celltype=CL:0000047!4.50e-10!8;CL:0000540!3.27e-08!6;CL:0000031!3.27e-08!6;CL:0000404!3.27e-08!6 | |ontology_enrichment_celltype=CL:0000047!4.50e-10!8;CL:0000540!3.27e-08!6;CL:0000031!3.27e-08!6;CL:0000404!3.27e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.61e-08;6!CL:0000404;1.61e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.71e-09,8;CL:0000540,1.48e-08,6;CL:0000031,1.48e-08,6;CL:0000404,1.48e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.10e-21;82!UBERON:0006215;7.85e-09;3!CL:0000031;1.61e-08;6!UBERON:0006241;1.67e-07;3!UBERON:0003057;1.67e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;4.23e-54;32!UBERON:0003528;5.31e-54;34!UBERON:0002020;5.31e-54;34!UBERON:0001893;6.84e-54;34!UBERON:0002791;1.32e-53;32!UBERON:0002619;3.80e-53;22!UBERON:0002780;4.63e-53;41!UBERON:0001890;4.63e-53;41!UBERON:0000073;2.77e-49;53!UBERON:0002616;2.77e-49;53!UBERON:0001950;9.65e-49;20!UBERON:0000956;3.72e-46;25!UBERON:0000203;3.72e-46;25!UBERON:0000955;2.97e-33;68!UBERON:0001017;2.02e-32;75!UBERON:0001016;5.41e-29;83!UBERON:0002420;2.62e-19;9!UBERON:0007245;2.62e-19;9!UBERON:0010009;2.62e-19;9!UBERON:0010011;2.62e-19;9!UBERON:0000454;2.62e-19;9!UBERON:0000125;6.97e-19;9!UBERON:0002308;6.97e-19;9!UBERON:0001871;7.33e-17;6!UBERON:0004732;1.92e-16;13!UBERON:0000200;2.65e-15;6!UBERON:0009663;6.94e-15;7!UBERON:0004733;8.61e-15;12!UBERON:0002028;8.61e-15;12!UBERON:0007023;2.17e-13;114!UBERON:0002298;2.64e-13;6!UBERON:0002021;4.89e-13;5!UBERON:0001872;6.38e-13;5!UBERON:0000349;1.69e-12;5!UBERON:0011216;1.47e-11;132!UBERON:0001894;5.49e-11;7!UBERON:0000369;1.36e-09;4!UBERON:0002435;1.36e-09;4!UBERON:0000204;1.36e-09;4!UBERON:0002680;1.40e-09;9!UBERON:0001895;1.40e-09;9!UBERON:0001870;1.77e-08;3!UBERON:0000988;1.07e-07;3!UBERON:0010314;1.08e-07;132!UBERON:0005383;1.59e-07;3!UBERON:0005382;1.59e-07;3!UBERON:0002240;1.67e-07;3!UBERON:0005174;1.67e-07;3!UBERON:0001137;1.67e-07;3!UBERON:0001896;2.85e-07;3!UBERON:0005290;2.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.24e-94,56;UBERON:0005068,9.24e-94,56;UBERON:0006241,9.24e-94,56;UBERON:0007135,9.24e-94,56;UBERON:0001017,5.10e-89,81;UBERON:0000073,1.80e-87,53;UBERON:0002616,1.80e-87,53;UBERON:0001016,3.31e-87,89;UBERON:0000955,5.45e-74,68;UBERON:0006238,5.45e-74,68;UBERON:0002780,1.54e-73,41;UBERON:0001890,1.54e-73,41;UBERON:0003080,1.54e-73,41;UBERON:0006240,1.54e-73,41;UBERON:0003075,2.34e-67,82;UBERON:0007284,2.34e-67,82;UBERON:0003528,5.91e-64,34;UBERON:0002020,5.91e-64,34;UBERON:0001893,7.82e-64,34;UBERON:0002346,1.50e-63,86;UBERON:0001869,2.23e-60,32;UBERON:0002791,9.02e-60,32;UBERON:0010371,1.60e-56,104;UBERON:0002619,3.38e-53,22;UBERON:0003056,4.19e-51,61;UBERON:0001950,9.01e-49,20;UBERON:0000956,3.36e-46,25;UBERON:0000203,3.36e-46,25;UBERON:0004121,1.28e-45,171;UBERON:0000924,1.28e-45,171;UBERON:0006601,1.28e-45,171;UBERON:0007023,1.74e-44,114;UBERON:0010314,3.57e-38,132;UBERON:0011216,9.31e-34,223;UBERON:0000025,1.31e-20,192;UBERON:0003076,2.07e-20,15;UBERON:0003057,2.07e-20,15;UBERON:0002420,3.32e-19,9;UBERON:0007245,3.32e-19,9;UBERON:0010009,3.32e-19,9;UBERON:0010011,3.32e-19,9;UBERON:0000454,3.32e-19,9;UBERON:0000125,8.06e-19,9;UBERON:0002308,8.06e-19,9;UBERON:0001871,7.08e-17,6;UBERON:0004732,1.67e-16,13;UBERON:0000200,2.59e-15,6;UBERON:0004733,7.86e-15,12;UBERON:0002028,7.86e-15,12;UBERON:0007277,7.86e-15,12;UBERON:0009663,8.37e-15,7;UBERON:0004111,1.85e-14,240;UBERON:0002298,2.34e-13,6;UBERON:0002021,4.78e-13,5;UBERON:0001872,6.70e-13,5;UBERON:0000349,1.73e-12,5;UBERON:0000483,3.61e-12,306;UBERON:0000119,6.59e-12,309;UBERON:0001894,6.48e-11,7;UBERON:0006222,6.48e-11,7;UBERON:0002680,1.36e-09,9;UBERON:0001895,1.36e-09,9;UBERON:0010092,1.36e-09,9;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0001870,1.65e-08,3;UBERON:0002050,6.47e-08,564;UBERON:0000988,1.02e-07,3;UBERON:0000923,1.30e-07,560;UBERON:0010316,1.30e-07,560;UBERON:0005291,1.30e-07,560;UBERON:0006598,1.30e-07,560;UBERON:0010317,1.30e-07,560;UBERON:0002532,1.30e-07,560;UBERON:0002240,1.61e-07,3;UBERON:0005174,1.61e-07,3;UBERON:0001137,1.61e-07,3;UBERON:0005383,1.65e-07,3;UBERON:0005382,1.65e-07,3;UBERON:0001896,2.64e-07,3;UBERON:0005290,2.64e-07,3;UBERON:0010096,2.64e-07,3;UBERON:0005423,3.88e-07,581;UBERON:0000922,3.94e-07,592 | |||
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|short_description=p4@NRXN1 | |short_description=p4@NRXN1 | ||
}} | }} |
Latest revision as of 13:59, 17 September 2015
Short description: | p4@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NRXN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -47bp_to_ENST00000401669_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | E7ERL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.71e-09 | 8 |
neuron | 1.48e-08 | 6 |
neuroblast | 1.48e-08 | 6 |
electrically signaling cell | 1.48e-08 | 6 |