FFCP PHASE1:Hg19::chr4:46391367..46391436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2555 | |EntrezGene=2555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |HGNC=4076 | ||
|TSSclassifier=strong | |||
|UniProt=P47869,D6RB77,D6RBL7,A8K0U7 | |UniProt=P47869,D6RB77,D6RBL7,A8K0U7 | ||
|association_with_transcript=0bp_to_ENST00000356504,ENST00000503806,ENST00000506961,ENST00000514090,NM_001114175,uc003gxc.3_5end | |association_with_transcript=0bp_to_ENST00000356504,ENST00000503806,ENST00000506961,ENST00000514090,NM_001114175,uc003gxc.3_5end | ||
|cluster_id=chr4:46391367..46391436,- | |||
|coexpression_cluster_id=C4419 | |||
|description=CAGE_peak_3_at_GABRA2_5end | |description=CAGE_peak_3_at_GABRA2_5end | ||
|id=chr4:46391367..46391436,- | |id=chr4:46391367..46391436,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.12e-17;82!UBERON:0006215;7.93e-10;3!UBERON:0006241;2.43e-09;3!UBERON:0003057;2.43e-09;3!UBERON:0010122;6.36e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.36e-70!57;UBERON:0005068!5.36e-70!57;UBERON:0006241!5.36e-70!57;UBERON:0007135!5.36e-70!57;UBERON:0005743!1.73e-64!86;UBERON:0002346!1.82e-64!90;UBERON:0003075!3.34e-64!86;UBERON:0007284!3.34e-64!86;UBERON:0001017!3.87e-64!82;UBERON:0002616!1.18e-58!59;UBERON:0000955!1.27e-58!69;UBERON:0006238!1.27e-58!69;UBERON:0000073!2.27e-58!94;UBERON:0001016!2.27e-58!94;UBERON:0002780!8.35e-56!41;UBERON:0001890!8.35e-56!41;UBERON:0006240!8.35e-56!41;UBERON:0003080!3.56e-54!42;UBERON:0003056!1.84e-49!61;UBERON:0001869!1.89e-46!32;UBERON:0001893!3.52e-46!34;UBERON:0002020!4.10e-46!34;UBERON:0003528!4.10e-46!34;UBERON:0002791!1.30e-44!33;UBERON:0007023!6.79e-42!115;UBERON:0002619!5.58e-38!22;UBERON:0000153!2.71e-37!129;UBERON:0007811!2.71e-37!129;UBERON:0000033!3.06e-37!123;UBERON:0000956!3.34e-35!25;UBERON:0000203!3.34e-35!25;UBERON:0000924!1.55e-34!173;UBERON:0006601!1.55e-34!173;UBERON:0001950!1.56e-34!20;UBERON:0004121!1.35e-33!169;UBERON:0000025!2.05e-17!194;UBERON:0000483!9.56e-17!309;UBERON:0000119!2.31e-16!312;UBERON:0000481!2.31e-16!347;UBERON:0003076!2.91e-16!15;UBERON:0003057!2.91e-16!15;UBERON:0000064!3.18e-16!219;UBERON:0000062!1.08e-14!511;UBERON:0001871!3.29e-14!7;UBERON:0000475!7.02e-13!365;UBERON:0002420!1.42e-12!9;UBERON:0007245!1.42e-12!9;UBERON:0010009!1.42e-12!9;UBERON:0010011!1.42e-12!9;UBERON:0000454!1.42e-12!9;UBERON:0000922!1.88e-12!612;UBERON:0004733!2.81e-12!12;UBERON:0002028!2.81e-12!12;UBERON:0007277!2.81e-12!12;UBERON:0002308!3.56e-12!9;UBERON:0000125!3.56e-12!9;UBERON:0000477!7.62e-12!286;UBERON:0004111!7.93e-12!241;UBERON:0000200!2.47e-11!6;UBERON:0004732!3.87e-11!13;UBERON:0000923!7.85e-11!604;UBERON:0005291!7.85e-11!604;UBERON:0006598!7.85e-11!604;UBERON:0002532!7.85e-11!604;UBERON:0001894!8.56e-11!7;UBERON:0006222!8.56e-11!7;UBERON:0002050!9.19e-11!605;UBERON:0005423!9.19e-11!605;UBERON:0000349!7.33e-10!5;UBERON:0001872!2.13e-09!5;UBERON:0009663!2.24e-09!7;UBERON:0002021!2.35e-09!5;UBERON:0000468!2.58e-09!659;UBERON:0000467!5.63e-09!625;UBERON:0000480!6.50e-09!626;UBERON:0002680!2.69e-08!9;UBERON:0001895!2.69e-08!9;UBERON:0010092!2.69e-08!9;UBERON:0000369!3.04e-08!4;UBERON:0002435!3.04e-08!4;UBERON:0000204!3.04e-08!4;UBERON:0010082!3.04e-08!4;UBERON:0002298!3.10e-07!8;UBERON:0000160!7.50e-07!27 | |ontology_enrichment_uberon=UBERON:0001049!5.36e-70!57;UBERON:0005068!5.36e-70!57;UBERON:0006241!5.36e-70!57;UBERON:0007135!5.36e-70!57;UBERON:0005743!1.73e-64!86;UBERON:0002346!1.82e-64!90;UBERON:0003075!3.34e-64!86;UBERON:0007284!3.34e-64!86;UBERON:0001017!3.87e-64!82;UBERON:0002616!1.18e-58!59;UBERON:0000955!1.27e-58!69;UBERON:0006238!1.27e-58!69;UBERON:0000073!2.27e-58!94;UBERON:0001016!2.27e-58!94;UBERON:0002780!8.35e-56!41;UBERON:0001890!8.35e-56!41;UBERON:0006240!8.35e-56!41;UBERON:0003080!3.56e-54!42;UBERON:0003056!1.84e-49!61;UBERON:0001869!1.89e-46!32;UBERON:0001893!3.52e-46!34;UBERON:0002020!4.10e-46!34;UBERON:0003528!4.10e-46!34;UBERON:0002791!1.30e-44!33;UBERON:0007023!6.79e-42!115;UBERON:0002619!5.58e-38!22;UBERON:0000153!2.71e-37!129;UBERON:0007811!2.71e-37!129;UBERON:0000033!3.06e-37!123;UBERON:0000956!3.34e-35!25;UBERON:0000203!3.34e-35!25;UBERON:0000924!1.55e-34!173;UBERON:0006601!1.55e-34!173;UBERON:0001950!1.56e-34!20;UBERON:0004121!1.35e-33!169;UBERON:0000025!2.05e-17!194;UBERON:0000483!9.56e-17!309;UBERON:0000119!2.31e-16!312;UBERON:0000481!2.31e-16!347;UBERON:0003076!2.91e-16!15;UBERON:0003057!2.91e-16!15;UBERON:0000064!3.18e-16!219;UBERON:0000062!1.08e-14!511;UBERON:0001871!3.29e-14!7;UBERON:0000475!7.02e-13!365;UBERON:0002420!1.42e-12!9;UBERON:0007245!1.42e-12!9;UBERON:0010009!1.42e-12!9;UBERON:0010011!1.42e-12!9;UBERON:0000454!1.42e-12!9;UBERON:0000922!1.88e-12!612;UBERON:0004733!2.81e-12!12;UBERON:0002028!2.81e-12!12;UBERON:0007277!2.81e-12!12;UBERON:0002308!3.56e-12!9;UBERON:0000125!3.56e-12!9;UBERON:0000477!7.62e-12!286;UBERON:0004111!7.93e-12!241;UBERON:0000200!2.47e-11!6;UBERON:0004732!3.87e-11!13;UBERON:0000923!7.85e-11!604;UBERON:0005291!7.85e-11!604;UBERON:0006598!7.85e-11!604;UBERON:0002532!7.85e-11!604;UBERON:0001894!8.56e-11!7;UBERON:0006222!8.56e-11!7;UBERON:0002050!9.19e-11!605;UBERON:0005423!9.19e-11!605;UBERON:0000349!7.33e-10!5;UBERON:0001872!2.13e-09!5;UBERON:0009663!2.24e-09!7;UBERON:0002021!2.35e-09!5;UBERON:0000468!2.58e-09!659;UBERON:0000467!5.63e-09!625;UBERON:0000480!6.50e-09!626;UBERON:0002680!2.69e-08!9;UBERON:0001895!2.69e-08!9;UBERON:0010092!2.69e-08!9;UBERON:0000369!3.04e-08!4;UBERON:0002435!3.04e-08!4;UBERON:0000204!3.04e-08!4;UBERON:0010082!3.04e-08!4;UBERON:0002298!3.10e-07!8;UBERON:0000160!7.50e-07!27 | ||
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|short_description=p3@GABRA2 | |short_description=p3@GABRA2 | ||
}} | }} |
Latest revision as of 21:31, 17 September 2015
Short description: | p3@GABRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GABRA2_5end |
Coexpression cluster: | C4419_colon_argyrophil_hippocampus_amygdala_parietal_medial_caudate |
Association with transcript: | 0bp_to_ENST00000356504, ENST00000503806, ENST00000506961, ENST00000514090, NM_001114175, uc003gxc.3_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | P47869D6RB77D6RBL7A8K0U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data