FFCP PHASE1:Hg19::chr15:93632396..93632407,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56963 | |EntrezGene=56963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30308 | |HGNC=30308 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B86 | |UniProt=Q96B86 | ||
|association_with_transcript=25bp_to_ENST00000329082,uc002bss.1_5end | |association_with_transcript=25bp_to_ENST00000329082,uc002bss.1_5end | ||
|cluster_id=chr15:93632396..93632407,- | |||
|coexpression_cluster_id=C876 | |coexpression_cluster_id=C876 | ||
|description=CAGE_peak_3_at_RGMA_5end | |description=CAGE_peak_3_at_RGMA_5end | ||
|id=chr15:93632396..93632407,- | |id=chr15:93632396..93632407,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.26e-14;82!UBERON:0006241;1.33e-09;3!UBERON:0003057;1.33e-09;3!UBERON:0006215;3.55e-08;3!UBERON:0010122;9.68e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-81!115;UBERON:0001049!9.77e-59!57;UBERON:0005068!9.77e-59!57;UBERON:0006241!9.77e-59!57;UBERON:0007135!9.77e-59!57;UBERON:0001017!2.02e-53!82;UBERON:0005743!1.27e-51!86;UBERON:0002616!4.12e-48!59;UBERON:0000073!4.62e-48!94;UBERON:0001016!4.62e-48!94;UBERON:0000955!3.06e-44!69;UBERON:0006238!3.06e-44!69;UBERON:0002780!4.04e-44!41;UBERON:0001890!4.04e-44!41;UBERON:0006240!4.04e-44!41;UBERON:0003075!1.75e-43!86;UBERON:0007284!1.75e-43!86;UBERON:0003080!9.17e-43!42;UBERON:0002346!1.12e-40!90;UBERON:0002020!9.32e-39!34;UBERON:0003528!9.32e-39!34;UBERON:0001893!1.90e-38!34;UBERON:0002791!3.78e-37!33;UBERON:0001869!1.65e-35!32;UBERON:0004121!8.32e-30!169;UBERON:0000153!6.30e-29!129;UBERON:0007811!6.30e-29!129;UBERON:0000924!1.40e-28!173;UBERON:0006601!1.40e-28!173;UBERON:0003056!2.70e-28!61;UBERON:0000033!9.65e-28!123;UBERON:0000956!6.65e-26!25;UBERON:0000203!6.65e-26!25;UBERON:0002619!1.72e-25!22;UBERON:0001950!1.21e-22!20;UBERON:0003076!1.80e-16!15;UBERON:0003057!1.80e-16!15;UBERON:0002308!1.64e-14!9;UBERON:0000125!1.64e-14!9;UBERON:0002420!5.82e-14!9;UBERON:0007245!5.82e-14!9;UBERON:0010009!5.82e-14!9;UBERON:0010011!5.82e-14!9;UBERON:0000454!5.82e-14!9;UBERON:0000025!1.18e-13!194;UBERON:0004111!2.71e-13!241;UBERON:0004732!2.85e-13!13;UBERON:0000468!1.41e-12!659;UBERON:0000922!3.11e-12!612;UBERON:0004733!3.64e-12!12;UBERON:0002028!3.64e-12!12;UBERON:0007277!3.64e-12!12;UBERON:0001871!8.69e-12!7;UBERON:0000062!1.44e-11!511;UBERON:0009663!1.81e-11!7;UBERON:0000467!1.06e-10!625;UBERON:0000480!1.26e-10!626;UBERON:0000064!1.42e-10!219;UBERON:0000477!1.74e-10!286;UBERON:0002050!2.50e-10!605;UBERON:0005423!2.50e-10!605;UBERON:0000481!3.05e-10!347;UBERON:0002298!3.39e-10!8;UBERON:0000923!7.00e-10!604;UBERON:0005291!7.00e-10!604;UBERON:0006598!7.00e-10!604;UBERON:0002532!7.00e-10!604;UBERON:0000475!2.03e-09!365;UBERON:0000483!2.53e-08!309;UBERON:0000349!2.62e-08!5;UBERON:0002680!4.47e-08!9;UBERON:0001895!4.47e-08!9;UBERON:0010092!4.47e-08!9;UBERON:0000119!4.63e-08!312;UBERON:0001872!7.71e-08!5;UBERON:0003135!8.82e-08!11;UBERON:0000369!3.85e-07!4;UBERON:0002435!3.85e-07!4;UBERON:0000204!3.85e-07!4;UBERON:0010082!3.85e-07!4;UBERON:0001894!4.54e-07!7;UBERON:0006222!4.54e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.02e-81!115;UBERON:0001049!9.77e-59!57;UBERON:0005068!9.77e-59!57;UBERON:0006241!9.77e-59!57;UBERON:0007135!9.77e-59!57;UBERON:0001017!2.02e-53!82;UBERON:0005743!1.27e-51!86;UBERON:0002616!4.12e-48!59;UBERON:0000073!4.62e-48!94;UBERON:0001016!4.62e-48!94;UBERON:0000955!3.06e-44!69;UBERON:0006238!3.06e-44!69;UBERON:0002780!4.04e-44!41;UBERON:0001890!4.04e-44!41;UBERON:0006240!4.04e-44!41;UBERON:0003075!1.75e-43!86;UBERON:0007284!1.75e-43!86;UBERON:0003080!9.17e-43!42;UBERON:0002346!1.12e-40!90;UBERON:0002020!9.32e-39!34;UBERON:0003528!9.32e-39!34;UBERON:0001893!1.90e-38!34;UBERON:0002791!3.78e-37!33;UBERON:0001869!1.65e-35!32;UBERON:0004121!8.32e-30!169;UBERON:0000153!6.30e-29!129;UBERON:0007811!6.30e-29!129;UBERON:0000924!1.40e-28!173;UBERON:0006601!1.40e-28!173;UBERON:0003056!2.70e-28!61;UBERON:0000033!9.65e-28!123;UBERON:0000956!6.65e-26!25;UBERON:0000203!6.65e-26!25;UBERON:0002619!1.72e-25!22;UBERON:0001950!1.21e-22!20;UBERON:0003076!1.80e-16!15;UBERON:0003057!1.80e-16!15;UBERON:0002308!1.64e-14!9;UBERON:0000125!1.64e-14!9;UBERON:0002420!5.82e-14!9;UBERON:0007245!5.82e-14!9;UBERON:0010009!5.82e-14!9;UBERON:0010011!5.82e-14!9;UBERON:0000454!5.82e-14!9;UBERON:0000025!1.18e-13!194;UBERON:0004111!2.71e-13!241;UBERON:0004732!2.85e-13!13;UBERON:0000468!1.41e-12!659;UBERON:0000922!3.11e-12!612;UBERON:0004733!3.64e-12!12;UBERON:0002028!3.64e-12!12;UBERON:0007277!3.64e-12!12;UBERON:0001871!8.69e-12!7;UBERON:0000062!1.44e-11!511;UBERON:0009663!1.81e-11!7;UBERON:0000467!1.06e-10!625;UBERON:0000480!1.26e-10!626;UBERON:0000064!1.42e-10!219;UBERON:0000477!1.74e-10!286;UBERON:0002050!2.50e-10!605;UBERON:0005423!2.50e-10!605;UBERON:0000481!3.05e-10!347;UBERON:0002298!3.39e-10!8;UBERON:0000923!7.00e-10!604;UBERON:0005291!7.00e-10!604;UBERON:0006598!7.00e-10!604;UBERON:0002532!7.00e-10!604;UBERON:0000475!2.03e-09!365;UBERON:0000483!2.53e-08!309;UBERON:0000349!2.62e-08!5;UBERON:0002680!4.47e-08!9;UBERON:0001895!4.47e-08!9;UBERON:0010092!4.47e-08!9;UBERON:0000119!4.63e-08!312;UBERON:0001872!7.71e-08!5;UBERON:0003135!8.82e-08!11;UBERON:0000369!3.85e-07!4;UBERON:0002435!3.85e-07!4;UBERON:0000204!3.85e-07!4;UBERON:0010082!3.85e-07!4;UBERON:0001894!4.54e-07!7;UBERON:0006222!4.54e-07!7 | ||
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|short_description=p3@RGMA | |short_description=p3@RGMA | ||
}} | }} |
Latest revision as of 23:51, 19 September 2015
Short description: | p3@RGMA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RGMA_5end |
Coexpression cluster: | C876_skeletal_spinal_medulla_hippocampus_parietal_thalamus_occipital |
Association with transcript: | 25bp_to_ENST00000329082, uc002bss.1_5end |
EntrezGene: | RGMA |
HGNC: | 30308 |
UniProt: | Q96B86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data