FFCP PHASE1:Hg19::chr17:42985486..42985501,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=113bp_to_AK124465_5end | |association_with_transcript=113bp_to_AK124465_5end | ||
|cluster_id=chr17:42985486..42985501,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_36_at_GFAP_5end | |description=CAGE_peak_36_at_GFAP_5end | ||
|id=chr17:42985486..42985501,- | |id=chr17:42985486..42985501,- | ||
|ontology_enrichment_celltype=CL:0002605!3.76e-12!3;CL:0000128!8.97e-09!7;CL:0000126!8.97e-09!7;CL:0000127!8.97e-09!7;CL:0002453!8.97e-09!7 | |ontology_enrichment_celltype=CL:0002605!3.76e-12!3;CL:0000128!8.97e-09!7;CL:0000126!8.97e-09!7;CL:0000127!8.97e-09!7;CL:0002453!8.97e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.14e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.55e-24;3!UBERON:0003057;5.55e-24;3!UBERON:0006601;1.48e-11;82!UBERON:0006215;1.14e-10;3!UBERON:0005425;3.06e-09;1!UBERON:0006222;5.48e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.98e-121!57;UBERON:0005068!5.98e-121!57;UBERON:0006241!5.98e-121!57;UBERON:0007135!5.98e-121!57;UBERON:0001017!2.35e-105!82;UBERON:0005743!4.30e-100!86;UBERON:0002616!9.49e-100!59;UBERON:0000073!5.09e-94!94;UBERON:0001016!5.09e-94!94;UBERON:0000955!1.22e-91!69;UBERON:0006238!1.22e-91!69;UBERON:0003075!6.50e-85!86;UBERON:0007284!6.50e-85!86;UBERON:0002780!1.13e-81!41;UBERON:0001890!1.13e-81!41;UBERON:0006240!1.13e-81!41;UBERON:0002346!9.86e-81!90;UBERON:0003080!1.38e-79!42;UBERON:0002020!1.25e-69!34;UBERON:0003528!1.25e-69!34;UBERON:0001893!4.48e-69!34;UBERON:0002791!4.22e-66!33;UBERON:0001869!3.72e-62!32;UBERON:0007023!4.28e-56!115;UBERON:0003056!9.79e-53!61;UBERON:0000033!2.09e-50!123;UBERON:0004121!2.01e-48!169;UBERON:0000153!1.23e-47!129;UBERON:0007811!1.23e-47!129;UBERON:0000924!4.42e-47!173;UBERON:0006601!4.42e-47!173;UBERON:0000956!8.64e-46!25;UBERON:0000203!8.64e-46!25;UBERON:0003076!4.17e-41!15;UBERON:0003057!4.17e-41!15;UBERON:0002619!2.83e-36!22;UBERON:0004732!9.01e-34!13;UBERON:0001950!4.12e-30!20;UBERON:0004733!4.27e-30!12;UBERON:0002028!4.27e-30!12;UBERON:0007277!4.27e-30!12;UBERON:0000025!6.97e-29!194;UBERON:0002308!1.85e-25!9;UBERON:0000125!1.85e-25!9;UBERON:0002298!1.75e-23!8;UBERON:0004111!2.67e-21!241;UBERON:0002680!1.45e-19!9;UBERON:0001895!1.45e-19!9;UBERON:0010092!1.45e-19!9;UBERON:0002420!5.14e-19!9;UBERON:0007245!5.14e-19!9;UBERON:0010009!5.14e-19!9;UBERON:0010011!5.14e-19!9;UBERON:0000454!5.14e-19!9;UBERON:0009663!2.51e-18!7;UBERON:0000477!1.71e-17!286;UBERON:0000483!2.19e-16!309;UBERON:0000119!3.96e-16!312;UBERON:0001871!9.99e-16!7;UBERON:0000200!1.41e-14!6;UBERON:0000064!3.46e-14!219;UBERON:0001894!1.48e-13!7;UBERON:0006222!1.48e-13!7;UBERON:0000475!3.62e-13!365;UBERON:0002240!4.53e-13!3;UBERON:0001896!7.82e-13!3;UBERON:0005290!7.82e-13!3;UBERON:0010096!7.82e-13!3;UBERON:0006331!1.07e-12!3;UBERON:0000988!2.67e-12!3;UBERON:0000349!6.00e-12!5;UBERON:0002771!1.66e-11!3;UBERON:0002037!5.86e-10!6;UBERON:0006215!5.86e-10!6;UBERON:0005162!3.44e-09!2;UBERON:0000122!3.44e-09!2;UBERON:0002148!4.53e-09!2;UBERON:0009662!4.53e-09!2;UBERON:0001897!5.30e-09!2;UBERON:0000062!6.03e-09!511;UBERON:0001954!1.06e-08!2;UBERON:0003022!1.06e-08!2;UBERON:0002421!1.06e-08!2;UBERON:0002600!1.06e-08!2;UBERON:0000369!1.79e-08!4;UBERON:0002435!1.79e-08!4;UBERON:0000204!1.79e-08!4;UBERON:0010082!1.79e-08!4;UBERON:0001875!1.87e-08!2;UBERON:0006514!1.87e-08!2;UBERON:0002360!3.38e-08!2;UBERON:0000094!3.38e-08!2;UBERON:0007645!3.38e-08!2;UBERON:0001873!3.64e-08!2;UBERON:0010122!3.64e-08!2;UBERON:0001905!4.21e-08!2;UBERON:0002757!4.21e-08!2;UBERON:0010134!4.21e-08!2;UBERON:0002784!4.21e-08!2;UBERON:0005408!4.21e-08!2;UBERON:0001899!4.21e-08!2;UBERON:0005174!5.48e-08!5;UBERON:0001137!5.48e-08!5;UBERON:0002021!3.70e-07!5;UBERON:0001872!7.78e-07!5;UBERON:0000922!8.35e-07!612 | |ontology_enrichment_uberon=UBERON:0001049!5.98e-121!57;UBERON:0005068!5.98e-121!57;UBERON:0006241!5.98e-121!57;UBERON:0007135!5.98e-121!57;UBERON:0001017!2.35e-105!82;UBERON:0005743!4.30e-100!86;UBERON:0002616!9.49e-100!59;UBERON:0000073!5.09e-94!94;UBERON:0001016!5.09e-94!94;UBERON:0000955!1.22e-91!69;UBERON:0006238!1.22e-91!69;UBERON:0003075!6.50e-85!86;UBERON:0007284!6.50e-85!86;UBERON:0002780!1.13e-81!41;UBERON:0001890!1.13e-81!41;UBERON:0006240!1.13e-81!41;UBERON:0002346!9.86e-81!90;UBERON:0003080!1.38e-79!42;UBERON:0002020!1.25e-69!34;UBERON:0003528!1.25e-69!34;UBERON:0001893!4.48e-69!34;UBERON:0002791!4.22e-66!33;UBERON:0001869!3.72e-62!32;UBERON:0007023!4.28e-56!115;UBERON:0003056!9.79e-53!61;UBERON:0000033!2.09e-50!123;UBERON:0004121!2.01e-48!169;UBERON:0000153!1.23e-47!129;UBERON:0007811!1.23e-47!129;UBERON:0000924!4.42e-47!173;UBERON:0006601!4.42e-47!173;UBERON:0000956!8.64e-46!25;UBERON:0000203!8.64e-46!25;UBERON:0003076!4.17e-41!15;UBERON:0003057!4.17e-41!15;UBERON:0002619!2.83e-36!22;UBERON:0004732!9.01e-34!13;UBERON:0001950!4.12e-30!20;UBERON:0004733!4.27e-30!12;UBERON:0002028!4.27e-30!12;UBERON:0007277!4.27e-30!12;UBERON:0000025!6.97e-29!194;UBERON:0002308!1.85e-25!9;UBERON:0000125!1.85e-25!9;UBERON:0002298!1.75e-23!8;UBERON:0004111!2.67e-21!241;UBERON:0002680!1.45e-19!9;UBERON:0001895!1.45e-19!9;UBERON:0010092!1.45e-19!9;UBERON:0002420!5.14e-19!9;UBERON:0007245!5.14e-19!9;UBERON:0010009!5.14e-19!9;UBERON:0010011!5.14e-19!9;UBERON:0000454!5.14e-19!9;UBERON:0009663!2.51e-18!7;UBERON:0000477!1.71e-17!286;UBERON:0000483!2.19e-16!309;UBERON:0000119!3.96e-16!312;UBERON:0001871!9.99e-16!7;UBERON:0000200!1.41e-14!6;UBERON:0000064!3.46e-14!219;UBERON:0001894!1.48e-13!7;UBERON:0006222!1.48e-13!7;UBERON:0000475!3.62e-13!365;UBERON:0002240!4.53e-13!3;UBERON:0001896!7.82e-13!3;UBERON:0005290!7.82e-13!3;UBERON:0010096!7.82e-13!3;UBERON:0006331!1.07e-12!3;UBERON:0000988!2.67e-12!3;UBERON:0000349!6.00e-12!5;UBERON:0002771!1.66e-11!3;UBERON:0002037!5.86e-10!6;UBERON:0006215!5.86e-10!6;UBERON:0005162!3.44e-09!2;UBERON:0000122!3.44e-09!2;UBERON:0002148!4.53e-09!2;UBERON:0009662!4.53e-09!2;UBERON:0001897!5.30e-09!2;UBERON:0000062!6.03e-09!511;UBERON:0001954!1.06e-08!2;UBERON:0003022!1.06e-08!2;UBERON:0002421!1.06e-08!2;UBERON:0002600!1.06e-08!2;UBERON:0000369!1.79e-08!4;UBERON:0002435!1.79e-08!4;UBERON:0000204!1.79e-08!4;UBERON:0010082!1.79e-08!4;UBERON:0001875!1.87e-08!2;UBERON:0006514!1.87e-08!2;UBERON:0002360!3.38e-08!2;UBERON:0000094!3.38e-08!2;UBERON:0007645!3.38e-08!2;UBERON:0001873!3.64e-08!2;UBERON:0010122!3.64e-08!2;UBERON:0001905!4.21e-08!2;UBERON:0002757!4.21e-08!2;UBERON:0010134!4.21e-08!2;UBERON:0002784!4.21e-08!2;UBERON:0005408!4.21e-08!2;UBERON:0001899!4.21e-08!2;UBERON:0005174!5.48e-08!5;UBERON:0001137!5.48e-08!5;UBERON:0002021!3.70e-07!5;UBERON:0001872!7.78e-07!5;UBERON:0000922!8.35e-07!612 | ||
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|short_description=p36@GFAP | |short_description=p36@GFAP | ||
}} | }} |
Latest revision as of 23:33, 24 September 2015
Short description: | p36@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 113bp_to_AK124465_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.90e-11 | 3 |