FFCP PHASE1:Hg19::chr18:40857274..40857292,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |EntrezGene=6860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |HGNC=11512 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |UniProt=F5GY31 | ||
|association_with_transcript=48bp_to_ENST00000442661_5end | |association_with_transcript=48bp_to_ENST00000442661_5end | ||
|cluster_id=chr18:40857274..40857292,- | |||
|coexpression_cluster_id=C759 | |coexpression_cluster_id=C759 | ||
|description=CAGE_peak_5_at_SYT4_5end | |description=CAGE_peak_5_at_SYT4_5end | ||
|id=chr18:40857274..40857292,- | |id=chr18:40857274..40857292,- | ||
|ontology_enrichment_celltype=CL:0000047!1.78e-13!8;CL:0000540!1.11e-10!6;CL:0000031!1.11e-10!6;CL:0000404!1.11e-10!6;CL:0002319!1.11e-07!25 | |ontology_enrichment_celltype=CL:0000047!1.78e-13!8;CL:0000540!1.11e-10!6;CL:0000031!1.11e-10!6;CL:0000404!1.11e-10!6;CL:0002319!1.11e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.84e-11;6!CL:0000404;2.84e-11;6!CL:0000333;1.72e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.35e-12,8;CL:0000540,3.21e-11,6;CL:0000031,3.21e-11,6;CL:0000404,3.21e-11,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.05e-20;82!CL:0000031;2.84e-11;6!UBERON:0006215;5.66e-10;3 | |||
|ontology_enrichment_disease=DOID:171!9.23e-13!10;DOID:169!2.66e-10!6 | |ontology_enrichment_disease=DOID:171!9.23e-13!10;DOID:169!2.66e-10!6 | ||
|ontology_enrichment_disease_v019=DOID:171;4.50e-12;10!DOID:169;7.78e-11;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.09e-12,10;DOID:169,8.85e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.99e-79!94;UBERON:0001016!4.99e-79!94;UBERON:0001017!6.78e-78!82;UBERON:0005743!8.00e-76!86;UBERON:0001049!3.19e-69!57;UBERON:0005068!3.19e-69!57;UBERON:0006241!3.19e-69!57;UBERON:0007135!3.19e-69!57;UBERON:0000955!1.81e-58!69;UBERON:0006238!1.81e-58!69;UBERON:0002616!3.80e-58!59;UBERON:0002780!1.22e-53!41;UBERON:0001890!1.22e-53!41;UBERON:0006240!1.22e-53!41;UBERON:0003080!4.37e-52!42;UBERON:0002346!3.37e-51!90;UBERON:0007023!1.16e-49!115;UBERON:0003075!4.61e-48!86;UBERON:0007284!4.61e-48!86;UBERON:0002020!1.89e-42!34;UBERON:0003528!1.89e-42!34;UBERON:0001893!2.41e-42!34;UBERON:0000924!1.30e-41!173;UBERON:0006601!1.30e-41!173;UBERON:0002791!1.20e-40!33;UBERON:0001869!4.49e-40!32;UBERON:0004121!7.35e-39!169;UBERON:0003056!6.78e-36!61;UBERON:0002619!7.92e-35!22;UBERON:0001950!5.42e-32!20;UBERON:0000956!6.07e-30!25;UBERON:0000203!6.07e-30!25;UBERON:0000033!1.07e-29!123;UBERON:0000153!1.15e-28!129;UBERON:0007811!1.15e-28!129;UBERON:0003076!1.87e-17!15;UBERON:0003057!1.87e-17!15;UBERON:0000025!2.23e-15!194;UBERON:0002420!5.74e-14!9;UBERON:0007245!5.74e-14!9;UBERON:0010009!5.74e-14!9;UBERON:0010011!5.74e-14!9;UBERON:0000454!5.74e-14!9;UBERON:0002308!6.99e-14!9;UBERON:0000125!6.99e-14!9;UBERON:0004733!1.59e-13!12;UBERON:0002028!1.59e-13!12;UBERON:0007277!1.59e-13!12;UBERON:0001894!1.21e-12!7;UBERON:0006222!1.21e-12!7;UBERON:0004732!2.74e-12!13;UBERON:0000200!2.26e-11!6;UBERON:0004111!5.32e-11!241;UBERON:0009663!5.45e-11!7;UBERON:0001871!9.24e-11!7;UBERON:0001872!7.63e-10!5;UBERON:0002021!7.77e-10!5;UBERON:0002298!8.49e-10!8;UBERON:0002680!1.66e-09!9;UBERON:0001895!1.66e-09!9;UBERON:0010092!1.66e-09!9;UBERON:0000349!5.43e-09!5;UBERON:0000483!6.12e-09!309;UBERON:0000119!1.08e-08!312;UBERON:0000013!1.08e-08!5;UBERON:0002410!1.08e-08!5;UBERON:0003296!1.80e-08!4;UBERON:0010133!1.80e-08!4;UBERON:0000477!2.88e-08!286;UBERON:0000369!1.55e-07!4;UBERON:0002435!1.55e-07!4;UBERON:0000204!1.55e-07!4;UBERON:0010082!1.55e-07!4;UBERON:0000064!6.10e-07!219 | |ontology_enrichment_uberon=UBERON:0000073!4.99e-79!94;UBERON:0001016!4.99e-79!94;UBERON:0001017!6.78e-78!82;UBERON:0005743!8.00e-76!86;UBERON:0001049!3.19e-69!57;UBERON:0005068!3.19e-69!57;UBERON:0006241!3.19e-69!57;UBERON:0007135!3.19e-69!57;UBERON:0000955!1.81e-58!69;UBERON:0006238!1.81e-58!69;UBERON:0002616!3.80e-58!59;UBERON:0002780!1.22e-53!41;UBERON:0001890!1.22e-53!41;UBERON:0006240!1.22e-53!41;UBERON:0003080!4.37e-52!42;UBERON:0002346!3.37e-51!90;UBERON:0007023!1.16e-49!115;UBERON:0003075!4.61e-48!86;UBERON:0007284!4.61e-48!86;UBERON:0002020!1.89e-42!34;UBERON:0003528!1.89e-42!34;UBERON:0001893!2.41e-42!34;UBERON:0000924!1.30e-41!173;UBERON:0006601!1.30e-41!173;UBERON:0002791!1.20e-40!33;UBERON:0001869!4.49e-40!32;UBERON:0004121!7.35e-39!169;UBERON:0003056!6.78e-36!61;UBERON:0002619!7.92e-35!22;UBERON:0001950!5.42e-32!20;UBERON:0000956!6.07e-30!25;UBERON:0000203!6.07e-30!25;UBERON:0000033!1.07e-29!123;UBERON:0000153!1.15e-28!129;UBERON:0007811!1.15e-28!129;UBERON:0003076!1.87e-17!15;UBERON:0003057!1.87e-17!15;UBERON:0000025!2.23e-15!194;UBERON:0002420!5.74e-14!9;UBERON:0007245!5.74e-14!9;UBERON:0010009!5.74e-14!9;UBERON:0010011!5.74e-14!9;UBERON:0000454!5.74e-14!9;UBERON:0002308!6.99e-14!9;UBERON:0000125!6.99e-14!9;UBERON:0004733!1.59e-13!12;UBERON:0002028!1.59e-13!12;UBERON:0007277!1.59e-13!12;UBERON:0001894!1.21e-12!7;UBERON:0006222!1.21e-12!7;UBERON:0004732!2.74e-12!13;UBERON:0000200!2.26e-11!6;UBERON:0004111!5.32e-11!241;UBERON:0009663!5.45e-11!7;UBERON:0001871!9.24e-11!7;UBERON:0001872!7.63e-10!5;UBERON:0002021!7.77e-10!5;UBERON:0002298!8.49e-10!8;UBERON:0002680!1.66e-09!9;UBERON:0001895!1.66e-09!9;UBERON:0010092!1.66e-09!9;UBERON:0000349!5.43e-09!5;UBERON:0000483!6.12e-09!309;UBERON:0000119!1.08e-08!312;UBERON:0000013!1.08e-08!5;UBERON:0002410!1.08e-08!5;UBERON:0003296!1.80e-08!4;UBERON:0010133!1.80e-08!4;UBERON:0000477!2.88e-08!286;UBERON:0000369!1.55e-07!4;UBERON:0002435!1.55e-07!4;UBERON:0000204!1.55e-07!4;UBERON:0010082!1.55e-07!4;UBERON:0000064!6.10e-07!219 | ||
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| ||
|short_description=p5@SYT4 | |short_description=p5@SYT4 | ||
}} | }} |
Latest revision as of 13:42, 19 September 2015
Short description: | p5@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 48bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.35e-12 | 8 |
neuron | 3.21e-11 | 6 |
neuroblast | 3.21e-11 | 6 |
electrically signaling cell | 3.21e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.09e-12 | 10 |
neuroendocrine tumor | 8.85e-11 | 6 |