FFCP PHASE1:Hg19::chr4:46391367..46391436,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2555 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |||
|TSSclassifier=strong | |||
|UniProt=P47869,D6RB77,D6RBL7,A8K0U7 | |||
|association_with_transcript=0bp_to_ENST00000356504,ENST00000503806,ENST00000506961,ENST00000514090,NM_001114175,uc003gxc.3_5end | |||
|cluster_id=chr4:46391367..46391436,- | |||
|coexpression_cluster_id=C4419 | |||
|description=CAGE_peak_3_at_GABRA2_5end | |||
|id=chr4:46391367..46391436,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.12e-17;82!UBERON:0006215;7.93e-10;3!UBERON:0006241;2.43e-09;3!UBERON:0003057;2.43e-09;3!UBERON:0010122;6.36e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.36e-70!57;UBERON:0005068!5.36e-70!57;UBERON:0006241!5.36e-70!57;UBERON:0007135!5.36e-70!57;UBERON:0005743!1.73e-64!86;UBERON:0002346!1.82e-64!90;UBERON:0003075!3.34e-64!86;UBERON:0007284!3.34e-64!86;UBERON:0001017!3.87e-64!82;UBERON:0002616!1.18e-58!59;UBERON:0000955!1.27e-58!69;UBERON:0006238!1.27e-58!69;UBERON:0000073!2.27e-58!94;UBERON:0001016!2.27e-58!94;UBERON:0002780!8.35e-56!41;UBERON:0001890!8.35e-56!41;UBERON:0006240!8.35e-56!41;UBERON:0003080!3.56e-54!42;UBERON:0003056!1.84e-49!61;UBERON:0001869!1.89e-46!32;UBERON:0001893!3.52e-46!34;UBERON:0002020!4.10e-46!34;UBERON:0003528!4.10e-46!34;UBERON:0002791!1.30e-44!33;UBERON:0007023!6.79e-42!115;UBERON:0002619!5.58e-38!22;UBERON:0000153!2.71e-37!129;UBERON:0007811!2.71e-37!129;UBERON:0000033!3.06e-37!123;UBERON:0000956!3.34e-35!25;UBERON:0000203!3.34e-35!25;UBERON:0000924!1.55e-34!173;UBERON:0006601!1.55e-34!173;UBERON:0001950!1.56e-34!20;UBERON:0004121!1.35e-33!169;UBERON:0000025!2.05e-17!194;UBERON:0000483!9.56e-17!309;UBERON:0000119!2.31e-16!312;UBERON:0000481!2.31e-16!347;UBERON:0003076!2.91e-16!15;UBERON:0003057!2.91e-16!15;UBERON:0000064!3.18e-16!219;UBERON:0000062!1.08e-14!511;UBERON:0001871!3.29e-14!7;UBERON:0000475!7.02e-13!365;UBERON:0002420!1.42e-12!9;UBERON:0007245!1.42e-12!9;UBERON:0010009!1.42e-12!9;UBERON:0010011!1.42e-12!9;UBERON:0000454!1.42e-12!9;UBERON:0000922!1.88e-12!612;UBERON:0004733!2.81e-12!12;UBERON:0002028!2.81e-12!12;UBERON:0007277!2.81e-12!12;UBERON:0002308!3.56e-12!9;UBERON:0000125!3.56e-12!9;UBERON:0000477!7.62e-12!286;UBERON:0004111!7.93e-12!241;UBERON:0000200!2.47e-11!6;UBERON:0004732!3.87e-11!13;UBERON:0000923!7.85e-11!604;UBERON:0005291!7.85e-11!604;UBERON:0006598!7.85e-11!604;UBERON:0002532!7.85e-11!604;UBERON:0001894!8.56e-11!7;UBERON:0006222!8.56e-11!7;UBERON:0002050!9.19e-11!605;UBERON:0005423!9.19e-11!605;UBERON:0000349!7.33e-10!5;UBERON:0001872!2.13e-09!5;UBERON:0009663!2.24e-09!7;UBERON:0002021!2.35e-09!5;UBERON:0000468!2.58e-09!659;UBERON:0000467!5.63e-09!625;UBERON:0000480!6.50e-09!626;UBERON:0002680!2.69e-08!9;UBERON:0001895!2.69e-08!9;UBERON:0010092!2.69e-08!9;UBERON:0000369!3.04e-08!4;UBERON:0002435!3.04e-08!4;UBERON:0000204!3.04e-08!4;UBERON:0010082!3.04e-08!4;UBERON:0002298!3.10e-07!8;UBERON:0000160!7.50e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.76e-73;32!UBERON:0003528;4.38e-70;34!UBERON:0002020;4.38e-70;34!UBERON:0001893;5.54e-70;34!UBERON:0002619;2.08e-69;22!UBERON:0002791;9.20e-69;32!UBERON:0001950;5.54e-63;20!UBERON:0000956;1.22e-60;25!UBERON:0000203;1.22e-60;25!UBERON:0002780;3.78e-58;41!UBERON:0001890;3.78e-58;41!UBERON:0000073;1.92e-53;53!UBERON:0002616;1.92e-53;53!UBERON:0001017;4.77e-39;75!UBERON:0000955;5.41e-37;68!UBERON:0001016;6.39e-32;83!UBERON:0002420;2.12e-22;9!UBERON:0007245;2.12e-22;9!UBERON:0010009;2.12e-22;9!UBERON:0010011;2.12e-22;9!UBERON:0000454;2.12e-22;9!UBERON:0001871;7.08e-22;6!UBERON:0000125;1.08e-21;9!UBERON:0002308;1.08e-21;9!UBERON:0000200;1.12e-19;6!UBERON:0004733;1.54e-18;12!UBERON:0002028;1.54e-18;12!UBERON:0002298;3.57e-17;6!UBERON:0004732;5.54e-17;13!UBERON:0000349;6.63e-17;5!UBERON:0011216;1.31e-16;132!UBERON:0009663;1.88e-16;7!UBERON:0001872;3.94e-16;5!UBERON:0002021;5.14e-16;5!UBERON:0007023;1.56e-14;114!UBERON:0000369;6.17e-14;4!UBERON:0002435;6.17e-14;4!UBERON:0000204;6.17e-14;4!UBERON:0002680;1.85e-11;9!UBERON:0001895;1.85e-11;9!UBERON:0005383;4.19e-11;3!UBERON:0005382;4.19e-11;3!UBERON:0001870;6.10e-11;3!UBERON:0000160;1.22e-09;17!UBERON:0001896;1.75e-09;3!UBERON:0005290;1.75e-09;3!UBERON:0000988;2.15e-09;3!UBERON:0002240;2.43e-09;3!UBERON:0005174;2.43e-09;3!UBERON:0001137;2.43e-09;3!UBERON:0010314;3.48e-08;132!UBERON:0001954;5.56e-08;2!UBERON:0003022;5.56e-08;2!UBERON:0002421;5.56e-08;2!UBERON:0002600;5.56e-08;2!UBERON:0002702;6.15e-08;2!UBERON:0001873;6.36e-08;2!UBERON:0002771;7.88e-08;2!UBERON:0001876;8.83e-08;2!UBERON:0001897;2.68e-07;2!UBERON:0010225;2.68e-07;2!UBERON:0005409;2.97e-07;22!UBERON:0001875;4.28e-07;2!UBERON:0006514;4.28e-07;2!UBERON:0002148;5.65e-07;2!UBERON:0006331;5.65e-07;2!UBERON:0009662;5.65e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9297717731956,14.0669416410513,0,0,0,0,0,63.9909179549861,0,0,0,0,0.179021174675609,0,0,0,0,7.75466196876175,10.4827950922892,1.99613798001194,0,0,0,0,0,0,0,0,0,13.2861207872076,17.9688693551858,9.15490417902499,5.75012151642368,2.95547618953547,11.1886552548526,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.2649686075035,1.99052386215701,0.973033209536731,94.7096724647119,0,0,0,2.6286441862464,0,8.19925560038687,0,0,0,0,3.62972148145992,3.97894590119637,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,11.1427000882347,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0.611989305817931,0,9.00630433064684,2.46429682005587,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,24.6521203840884,14.8461712661617,0,0,0,0,0,6.86469990235679,0,0.394028536495991,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,1.13312091520126,0.146552233678082,0,6.72271373080063,2.38018683136842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1770908794718,14.5211255233336,16.9007756453775,4.58727356552057,3.10601344303186,2.6080489235381,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5815176898075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0.315446980005013,2.40171224485641,0,0,7.7717362366716,9.91876034279095,11.8129055702292,11.0762836690008,6.80593579798639,4.42606415770994,10.9803439029659,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,7.29405913878662,12.4972495778216,15.5015097375888,6.34158101939068,5.4697480901822,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0.514464028312255,1.90315252335129,6.77459567697346,0,0,0,17.9111772504242,0.280272163313789,4.56579360254748,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,2.00652811080656,0.874238242015829,0,0,1.64973582971138,3.92616934229891,2.0793248022896,2.5359343655004,0,0,0.45120521581504,0,0,0,0,0,0,0,0,6.4591915681369,4.79985759374415,5.81929524566941,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,9.95003327350535,5.06821679723287,0,0.714193294391221,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0,0.430333232356058,0.332660356546013,0,0,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | |||
|short_description=p3@GABRA2 | |||
}} |
Latest revision as of 21:31, 17 September 2015
Short description: | p3@GABRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GABRA2_5end |
Coexpression cluster: | C4419_colon_argyrophil_hippocampus_amygdala_parietal_medial_caudate |
Association with transcript: | 0bp_to_ENST00000356504, ENST00000503806, ENST00000506961, ENST00000514090, NM_001114175, uc003gxc.3_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | P47869D6RB77D6RBL7A8K0U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data