FFCP PHASE1:Hg19::chr19:36359561..36359572,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36359561..36359572,+ to FFCP PHASE1:Hg19::chr19:36359561..36359572,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=333 | |EntrezGene=333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=597 | |HGNC=597 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_uc002ocg.2_5end | |||
|cluster_id=chr19:36359561..36359572,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_APLP1_5end | |||
|id=chr19:36359561..36359572,+ | |||
|ontology_enrichment_celltype=CL:0002586!5.14e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.40e-23;82!UBERON:0006241;3.98e-13;3!UBERON:0003057;3.98e-13;3!UBERON:0010122;1.63e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.73e-73!86;UBERON:0000073!3.42e-72!94;UBERON:0001016!3.42e-72!94;UBERON:0001049!2.91e-70!57;UBERON:0005068!2.91e-70!57;UBERON:0006241!2.91e-70!57;UBERON:0007135!2.91e-70!57;UBERON:0001017!6.24e-66!82;UBERON:0003075!1.46e-62!86;UBERON:0007284!1.46e-62!86;UBERON:0002346!2.30e-61!90;UBERON:0002616!2.62e-60!59;UBERON:0000955!1.18e-59!69;UBERON:0006238!1.18e-59!69;UBERON:0001893!2.41e-55!34;UBERON:0002020!2.86e-55!34;UBERON:0003528!2.86e-55!34;UBERON:0002780!5.29e-55!41;UBERON:0001890!5.29e-55!41;UBERON:0006240!5.29e-55!41;UBERON:0003080!1.82e-53!42;UBERON:0002791!3.14e-53!33;UBERON:0001869!6.86e-51!32;UBERON:0003056!3.10e-50!61;UBERON:0002619!1.90e-42!22;UBERON:0000033!3.25e-40!123;UBERON:0000924!1.26e-38!173;UBERON:0006601!1.26e-38!173;UBERON:0004121!1.48e-38!169;UBERON:0001950!1.50e-38!20;UBERON:0000153!1.24e-37!129;UBERON:0007811!1.24e-37!129;UBERON:0000956!9.59e-37!25;UBERON:0000203!9.59e-37!25;UBERON:0007023!1.01e-36!115;UBERON:0002308!3.99e-20!9;UBERON:0000125!3.99e-20!9;UBERON:0002420!1.34e-19!9;UBERON:0007245!1.34e-19!9;UBERON:0010009!1.34e-19!9;UBERON:0010011!1.34e-19!9;UBERON:0000454!1.34e-19!9;UBERON:0003076!3.87e-17!15;UBERON:0003057!3.87e-17!15;UBERON:0009663!6.91e-16!7;UBERON:0000025!1.67e-15!194;UBERON:0002298!1.87e-14!8;UBERON:0000200!1.33e-13!6;UBERON:0004732!1.94e-13!13;UBERON:0001871!7.41e-13!7;UBERON:0000064!2.30e-12!219;UBERON:0001872!1.30e-11!5;UBERON:0002021!1.42e-11!5;UBERON:0004733!1.70e-11!12;UBERON:0002028!1.70e-11!12;UBERON:0007277!1.70e-11!12;UBERON:0000483!2.59e-11!309;UBERON:0000349!2.84e-11!5;UBERON:0000475!3.99e-11!365;UBERON:0000119!4.67e-11!312;UBERON:0000966!4.28e-10!5;UBERON:0005388!4.28e-10!5;UBERON:0001802!4.28e-10!5;UBERON:0004111!5.99e-10!241;UBERON:0000369!2.08e-09!4;UBERON:0002435!2.08e-09!4;UBERON:0000204!2.08e-09!4;UBERON:0010082!2.08e-09!4;UBERON:0000477!1.48e-08!286;UBERON:0000988!3.92e-08!3;UBERON:0006331!4.20e-08!3;UBERON:0001896!4.29e-08!3;UBERON:0005290!4.29e-08!3;UBERON:0010096!4.29e-08!3;UBERON:0002240!5.16e-08!3;UBERON:0002771!2.19e-07!3;UBERON:0005383!2.33e-07!3;UBERON:0005382!2.33e-07!3;UBERON:0001781!5.14e-07!3;UBERON:0001782!5.14e-07!3;UBERON:0005424!5.14e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.51e-73;34!UBERON:0002020;1.51e-73;34!UBERON:0001893;2.52e-73;34!UBERON:0002791;2.58e-70;32!UBERON:0001869;3.03e-70;32!UBERON:0002619;4.67e-63;22!UBERON:0002780;7.04e-62;41!UBERON:0001890;7.04e-62;41!UBERON:0000073;2.65e-58;53!UBERON:0002616;2.65e-58;53!UBERON:0001950;3.64e-56;20!UBERON:0000956;3.31e-55;25!UBERON:0000203;3.31e-55;25!UBERON:0000955;2.81e-42;68!UBERON:0001017;1.48e-40;75!UBERON:0000125;5.04e-35;9!UBERON:0002308;5.04e-35;9!UBERON:0001016;7.19e-34;83!UBERON:0009663;2.40e-27;7!UBERON:0002420;2.95e-27;9!UBERON:0007245;2.95e-27;9!UBERON:0010009;2.95e-27;9!UBERON:0010011;2.95e-27;9!UBERON:0000454;2.95e-27;9!UBERON:0002298;5.78e-25;6!UBERON:0000200;2.91e-23;6!UBERON:0001872;1.21e-19;5!UBERON:0002021;1.33e-19;5!UBERON:0004732;2.05e-19;13!UBERON:0007023;5.81e-17;114!UBERON:0004733;4.26e-16;12!UBERON:0002028;4.26e-16;12!UBERON:0000369;1.08e-15;4!UBERON:0002435;1.08e-15;4!UBERON:0000204;1.08e-15;4!UBERON:0000988;2.15e-13;3!UBERON:0001896;2.49e-13;3!UBERON:0005290;2.49e-13;3!UBERON:0002240;3.98e-13;3!UBERON:0005174;3.98e-13;3!UBERON:0001137;3.98e-13;3!UBERON:0011216;4.29e-13;132!UBERON:0000349;1.27e-12;5!UBERON:0001870;1.99e-12;3!UBERON:0005383;5.18e-12;3!UBERON:0005382;5.18e-12;3!UBERON:0005162;6.63e-10;2!UBERON:0000122;6.63e-10;2!UBERON:0010314;9.27e-10;132!UBERON:0001875;1.74e-09;2!UBERON:0006514;1.74e-09;2!UBERON:0001897;1.78e-09;2!UBERON:0010225;1.78e-09;2!UBERON:0002148;2.10e-09;2!UBERON:0006331;2.10e-09;2!UBERON:0009662;2.10e-09;2!UBERON:0001871;4.14e-09;6!UBERON:0002702;8.33e-09;2!UBERON:0002771;1.45e-08;2!UBERON:0001954;1.45e-08;2!UBERON:0003022;1.45e-08;2!UBERON:0002421;1.45e-08;2!UBERON:0002600;1.45e-08;2!UBERON:0001873;1.63e-08;2!UBERON:0002680;1.81e-07;9!UBERON:0001895;1.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.23e-116,56;UBERON:0005068,7.23e-116,56;UBERON:0006241,7.23e-116,56;UBERON:0007135,7.23e-116,56;UBERON:0000073,1.25e-104,53;UBERON:0002616,1.25e-104,53;UBERON:0001017,2.55e-93,81;UBERON:0000955,2.43e-92,68;UBERON:0006238,2.43e-92,68;UBERON:0002780,1.20e-89,41;UBERON:0001890,1.20e-89,41;UBERON:0003080,1.20e-89,41;UBERON:0006240,1.20e-89,41;UBERON:0001893,4.15e-88,34;UBERON:0003528,5.59e-88,34;UBERON:0002020,5.59e-88,34;UBERON:0001016,1.60e-87,89;UBERON:0003075,5.50e-85,82;UBERON:0007284,5.50e-85,82;UBERON:0002346,1.19e-80,86;UBERON:0002791,2.41e-80,32;UBERON:0001869,3.34e-80,32;UBERON:0003056,1.69e-66,61;UBERON:0010371,3.16e-65,104;UBERON:0002619,4.84e-63,22;UBERON:0007023,8.13e-57,114;UBERON:0001950,4.25e-56,20;UBERON:0000956,3.41e-55,25;UBERON:0000203,3.41e-55,25;UBERON:0010314,3.78e-52,132;UBERON:0004121,7.42e-44,171;UBERON:0000924,7.42e-44,171;UBERON:0006601,7.42e-44,171;UBERON:0000125,4.85e-35,9;UBERON:0002308,4.85e-35,9;UBERON:0011216,5.05e-33,223;UBERON:0000025,9.87e-28,192;UBERON:0009663,2.26e-27,7;UBERON:0002420,2.61e-27,9;UBERON:0007245,2.61e-27,9;UBERON:0010009,2.61e-27,9;UBERON:0010011,2.61e-27,9;UBERON:0000454,2.61e-27,9;UBERON:0003076,7.68e-26,15;UBERON:0003057,7.68e-26,15;UBERON:0002298,5.90e-25,6;UBERON:0000200,3.03e-23,6;UBERON:0004111,2.34e-20,240;UBERON:0001872,1.18e-19,5;UBERON:0002021,1.39e-19,5;UBERON:0004732,2.00e-19,13;UBERON:0004733,4.16e-16,12;UBERON:0002028,4.16e-16,12;UBERON:0007277,4.16e-16,12;UBERON:0000483,4.55e-16,306;UBERON:0000119,8.06e-16,309;UBERON:0000369,1.10e-15,4;UBERON:0002435,1.10e-15,4;UBERON:0000204,1.10e-15,4;UBERON:0010082,1.10e-15,4;UBERON:0000988,2.15e-13,3;UBERON:0001896,2.54e-13,3;UBERON:0005290,2.54e-13,3;UBERON:0010096,2.54e-13,3;UBERON:0002240,3.52e-13,3;UBERON:0005174,3.52e-13,3;UBERON:0001137,3.52e-13,3;UBERON:0000349,1.07e-12,5;UBERON:0001870,2.33e-12,3;UBERON:0005383,5.29e-12,3;UBERON:0005382,5.29e-12,3;UBERON:0005162,6.63e-10,2;UBERON:0000122,6.63e-10,2;UBERON:0001875,1.60e-09,2;UBERON:0006514,1.60e-09,2;UBERON:0001897,1.82e-09,2;UBERON:0010225,1.82e-09,2;UBERON:0002148,2.14e-09,2;UBERON:0006331,2.14e-09,2;UBERON:0009662,2.14e-09,2;UBERON:0001871,3.93e-09,6;UBERON:0002702,9.20e-09,2;UBERON:0001954,1.26e-08,2;UBERON:0003022,1.26e-08,2;UBERON:0002421,1.26e-08,2;UBERON:0002600,1.26e-08,2;UBERON:0002771,1.36e-08,2;UBERON:0001873,1.59e-08,2;UBERON:0010122,1.59e-08,2;UBERON:0000923,6.55e-08,560;UBERON:0010316,6.55e-08,560;UBERON:0005291,6.55e-08,560;UBERON:0006598,6.55e-08,560;UBERON:0010317,6.55e-08,560;UBERON:0002532,6.55e-08,560;UBERON:0002050,8.81e-08,564;UBERON:0002680,1.77e-07,9;UBERON:0001895,1.77e-07,9;UBERON:0010092,1.77e-07,9;UBERON:0005423,2.98e-07,581;UBERON:0000922,6.33e-07,592 | |||
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|short_description=p4@APLP1 | |||
}} | }} |
Latest revision as of 14:06, 17 September 2015
Short description: | p4@APLP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APLP1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 160bp_to_uc002ocg.2_5end |
EntrezGene: | APLP1 |
HGNC: | 597 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data