FFCP PHASE1:Hg19::chr2:219610848..219610865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:219610848..219610865,+ to FFCP PHASE1:Hg19::chr2:219610848..219610865,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9654 | |EntrezGene=9654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28976 | |HGNC=28976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000475950,ENST00000480929_5end | |||
|cluster_id=chr2:219610848..219610865,+ | |||
|coexpression_cluster_id=C4186 | |||
|description=CAGE_peak_6_at_TTLL4_5end | |||
|id=chr2:219610848..219610865,+ | |||
|ontology_enrichment_celltype=CL:0000149!7.31e-09!4;CL:0002586!2.54e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.94e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.51e-17;82!UBERON:0010122;3.24e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.45e-64!57;UBERON:0005068!5.45e-64!57;UBERON:0006241!5.45e-64!57;UBERON:0007135!5.45e-64!57;UBERON:0005743!5.80e-60!86;UBERON:0000073!3.81e-55!94;UBERON:0001016!3.81e-55!94;UBERON:0003075!1.23e-53!86;UBERON:0007284!1.23e-53!86;UBERON:0001017!5.29e-53!82;UBERON:0002616!1.97e-52!59;UBERON:0002346!1.43e-50!90;UBERON:0002780!3.10e-50!41;UBERON:0001890!3.10e-50!41;UBERON:0006240!3.10e-50!41;UBERON:0000955!2.22e-49!69;UBERON:0006238!2.22e-49!69;UBERON:0003080!8.24e-49!42;UBERON:0001893!1.60e-47!34;UBERON:0002020!2.80e-47!34;UBERON:0003528!2.80e-47!34;UBERON:0002791!1.72e-45!33;UBERON:0001869!1.93e-43!32;UBERON:0003056!1.91e-42!61;UBERON:0007023!1.50e-39!115;UBERON:0000033!2.29e-35!123;UBERON:0004121!2.52e-35!169;UBERON:0000153!1.90e-34!129;UBERON:0007811!1.90e-34!129;UBERON:0000924!4.20e-34!173;UBERON:0006601!4.20e-34!173;UBERON:0000956!1.67e-30!25;UBERON:0000203!1.67e-30!25;UBERON:0002619!7.32e-29!22;UBERON:0001950!1.71e-25!20;UBERON:0000025!9.60e-21!194;UBERON:0002308!1.15e-18!9;UBERON:0000125!1.15e-18!9;UBERON:0002420!1.77e-18!9;UBERON:0007245!1.77e-18!9;UBERON:0010009!1.77e-18!9;UBERON:0010011!1.77e-18!9;UBERON:0000454!1.77e-18!9;UBERON:0000483!8.29e-16!309;UBERON:0003076!1.17e-15!15;UBERON:0003057!1.17e-15!15;UBERON:0000119!1.76e-15!312;UBERON:0004111!3.94e-15!241;UBERON:0009663!9.15e-15!7;UBERON:0002298!1.87e-13!8;UBERON:0000475!4.57e-13!365;UBERON:0004732!2.89e-12!13;UBERON:0001871!3.29e-12!7;UBERON:0000064!1.36e-11!219;UBERON:0000477!5.29e-11!286;UBERON:0000349!6.86e-11!5;UBERON:0004733!1.14e-10!12;UBERON:0002028!1.14e-10!12;UBERON:0007277!1.14e-10!12;UBERON:0000369!2.38e-09!4;UBERON:0002435!2.38e-09!4;UBERON:0000204!2.38e-09!4;UBERON:0010082!2.38e-09!4;UBERON:0000062!4.60e-09!511;UBERON:0000200!4.95e-09!6;UBERON:0000481!3.81e-08!347;UBERON:0000988!1.06e-07!3;UBERON:0001896!1.43e-07!3;UBERON:0005290!1.43e-07!3;UBERON:0010096!1.43e-07!3;UBERON:0000966!1.46e-07!5;UBERON:0005388!1.46e-07!5;UBERON:0001802!1.46e-07!5;UBERON:0006331!1.49e-07!3;UBERON:0001872!2.47e-07!5;UBERON:0001781!2.54e-07!3;UBERON:0001782!2.54e-07!3;UBERON:0005424!2.54e-07!3;UBERON:0000922!2.85e-07!612;UBERON:0005383!2.88e-07!3;UBERON:0005382!2.88e-07!3;UBERON:0002240!3.27e-07!3;UBERON:0002021!6.20e-07!5;UBERON:0002771!8.25e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.17e-38;34!UBERON:0003528;2.45e-35;34!UBERON:0002020;2.45e-35;34!UBERON:0000073;8.28e-34;53!UBERON:0002616;8.28e-34;53!UBERON:0002791;2.24e-33;32!UBERON:0001869;1.67e-32;32!UBERON:0002780;1.42e-31;41!UBERON:0001890;1.42e-31;41!UBERON:0000125;2.46e-28;9!UBERON:0002308;2.46e-28;9!UBERON:0002298;6.67e-25;6!UBERON:0002420;6.28e-22;9!UBERON:0007245;6.28e-22;9!UBERON:0010009;6.28e-22;9!UBERON:0010011;6.28e-22;9!UBERON:0000454;6.28e-22;9!UBERON:0009663;8.28e-21;7!UBERON:0000956;1.78e-20;25!UBERON:0000203;1.78e-20;25!UBERON:0001017;2.18e-20;75!UBERON:0002619;9.39e-20;22!UBERON:0000955;6.03e-19;68!UBERON:0001950;4.09e-18;20!UBERON:0001016;3.46e-17;83!UBERON:0000369;6.77e-17;4!UBERON:0002435;6.77e-17;4!UBERON:0000204;6.77e-17;4!UBERON:0004732;6.87e-15;13!UBERON:0000988;1.42e-13;3!UBERON:0001896;4.32e-13;3!UBERON:0005290;4.32e-13;3!UBERON:0005383;8.36e-13;3!UBERON:0005382;8.36e-13;3!UBERON:0007023;3.36e-12;114!UBERON:0004733;3.86e-12;12!UBERON:0002028;3.86e-12;12!UBERON:0005162;1.59e-09;2!UBERON:0000122;1.59e-09;2!UBERON:0002148;2.13e-09;2!UBERON:0006331;2.13e-09;2!UBERON:0009662;2.13e-09;2!UBERON:0001897;3.24e-09;2!UBERON:0001873;3.24e-09;2!UBERON:0010225;3.24e-09;2!UBERON:0000966;9.79e-09;5!UBERON:0005388;9.79e-09;5!UBERON:0001802;9.79e-09;5!UBERON:0000349;2.81e-08;5!UBERON:0010314;3.03e-08;132!UBERON:0001872;3.60e-08;5!UBERON:0001781;6.10e-07;3!UBERON:0001782;6.10e-07;3!UBERON:0002104;6.49e-07;21!UBERON:0000200;7.15e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.48e-63,56;UBERON:0005068,3.48e-63,56;UBERON:0006241,3.48e-63,56;UBERON:0007135,3.48e-63,56;UBERON:0000073,3.40e-58,53;UBERON:0002616,3.40e-58,53;UBERON:0003075,1.61e-57,82;UBERON:0007284,1.61e-57,82;UBERON:0002346,1.70e-54,86;UBERON:0001017,3.04e-47,81;UBERON:0002780,8.22e-47,41;UBERON:0001890,8.22e-47,41;UBERON:0003080,8.22e-47,41;UBERON:0006240,8.22e-47,41;UBERON:0000955,1.14e-46,68;UBERON:0006238,1.14e-46,68;UBERON:0010371,1.44e-46,104;UBERON:0003056,2.93e-46,61;UBERON:0001016,1.22e-44,89;UBERON:0001893,6.73e-43,34;UBERON:0003528,1.42e-42,34;UBERON:0002020,1.42e-42,34;UBERON:0010314,3.19e-39,132;UBERON:0007023,6.06e-37,114;UBERON:0001869,1.78e-36,32;UBERON:0002791,2.13e-36,32;UBERON:0000125,2.58e-28,9;UBERON:0002308,2.58e-28,9;UBERON:0004121,3.07e-28,171;UBERON:0000924,3.07e-28,171;UBERON:0006601,3.07e-28,171;UBERON:0002298,4.52e-25,6;UBERON:0002420,5.93e-22,9;UBERON:0007245,5.93e-22,9;UBERON:0010009,5.93e-22,9;UBERON:0010011,5.93e-22,9;UBERON:0000454,5.93e-22,9;UBERON:0000025,4.06e-21,192;UBERON:0009663,8.33e-21,7;UBERON:0000956,1.70e-20,25;UBERON:0000203,1.70e-20,25;UBERON:0002619,7.52e-20,22;UBERON:0011216,2.84e-19,223;UBERON:0001950,3.27e-18,20;UBERON:0003076,8.32e-17,15;UBERON:0003057,8.32e-17,15;UBERON:0000369,9.46e-17,4;UBERON:0002435,9.46e-17,4;UBERON:0000204,9.46e-17,4;UBERON:0010082,9.46e-17,4;UBERON:0000483,3.78e-16,306;UBERON:0000119,6.64e-16,309;UBERON:0004111,2.97e-15,240;UBERON:0004732,6.13e-15,13;UBERON:0000988,1.52e-13,3;UBERON:0001896,2.74e-13,3;UBERON:0005290,2.74e-13,3;UBERON:0010096,2.74e-13,3;UBERON:0005383,1.07e-12,3;UBERON:0005382,1.07e-12,3;UBERON:0004733,3.20e-12,12;UBERON:0002028,3.20e-12,12;UBERON:0007277,3.20e-12,12;UBERON:0000966,6.97e-12,6;UBERON:0005388,6.97e-12,6;UBERON:0001802,6.97e-12,6;UBERON:0001781,2.86e-10,4;UBERON:0005162,1.89e-09,2;UBERON:0000122,1.89e-09,2;UBERON:0002148,2.23e-09,2;UBERON:0006331,2.23e-09,2;UBERON:0009662,2.23e-09,2;UBERON:0001897,3.39e-09,2;UBERON:0010225,3.39e-09,2;UBERON:0001873,3.84e-09,2;UBERON:0010122,3.84e-09,2;UBERON:0000349,2.82e-08,5;UBERON:0001872,3.98e-08,5;UBERON:0000923,1.46e-07,560;UBERON:0010316,1.46e-07,560;UBERON:0005291,1.46e-07,560;UBERON:0006598,1.46e-07,560;UBERON:0010317,1.46e-07,560;UBERON:0002532,1.46e-07,560;UBERON:0002050,1.94e-07,564;UBERON:0000922,2.45e-07,592;UBERON:0001782,5.94e-07,3;UBERON:0005424,5.94e-07,3;UBERON:0005423,6.22e-07,581;UBERON:0000200,7.02e-07,6;UBERON:0000970,7.21e-07,21;UBERON:0002104,7.21e-07,21 | |||
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| ||
|short_description=p6@TTLL4 | |||
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Latest revision as of 18:30, 24 September 2015
Short description: | p6@TTLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TTLL4_5end |
Coexpression cluster: | C4186_retina_corpus_Retinal_medulla_eye_pons_spinal |
Association with transcript: | 0bp_to_ENST00000475950, ENST00000480929_5end |
EntrezGene: | TTLL4 |
HGNC: | 28976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.94e-07 | 3 |