FFCP PHASE1:Hg19::chr3:19189765..19189793,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18864 | |||
|TSSclassifier=strong | |||
|UniProt=Q96L42 | |||
|association_with_transcript=-152bp_to_ENST00000328405_5end | |||
|coexpression_cluster_id=C298 | |||
|description=CAGE_peak_2_at_KCNH8_5end | |||
|id=chr3:19189765..19189793,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.25e-07!5;CL:0000047!9.42e-07!8;CL:0000540!9.68e-07!6;CL:0000031!9.68e-07!6;CL:0000404!9.68e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.90e-19;82!UBERON:0006241;2.46e-10;3!UBERON:0003057;2.46e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.62e-57!57;UBERON:0005068!2.62e-57!57;UBERON:0006241!2.62e-57!57;UBERON:0007135!2.62e-57!57;UBERON:0002780!7.95e-53!41;UBERON:0001890!7.95e-53!41;UBERON:0006240!7.95e-53!41;UBERON:0003080!2.73e-51!42;UBERON:0000073!1.54e-50!94;UBERON:0001016!1.54e-50!94;UBERON:0001017!9.07e-50!82;UBERON:0005743!1.13e-48!86;UBERON:0002616!6.06e-47!59;UBERON:0007023!3.95e-43!115;UBERON:0000955!2.30e-41!69;UBERON:0006238!2.30e-41!69;UBERON:0001893!3.40e-41!34;UBERON:0002020!6.65e-41!34;UBERON:0003528!6.65e-41!34;UBERON:0002791!1.69e-39!33;UBERON:0003075!2.43e-39!86;UBERON:0007284!2.43e-39!86;UBERON:0001869!1.14e-37!32;UBERON:0003056!4.69e-37!61;UBERON:0002346!6.96e-37!90;UBERON:0002619!5.13e-31!22;UBERON:0004121!9.87e-30!169;UBERON:0000924!1.36e-28!173;UBERON:0006601!1.36e-28!173;UBERON:0001950!7.92e-28!20;UBERON:0000956!1.29e-26!25;UBERON:0000203!1.29e-26!25;UBERON:0000153!3.04e-25!129;UBERON:0007811!3.04e-25!129;UBERON:0000033!6.98e-25!123;UBERON:0002308!4.07e-16!9;UBERON:0000125!4.07e-16!9;UBERON:0002420!7.79e-16!9;UBERON:0007245!7.79e-16!9;UBERON:0010009!7.79e-16!9;UBERON:0010011!7.79e-16!9;UBERON:0000454!7.79e-16!9;UBERON:0001894!4.47e-13!7;UBERON:0006222!4.47e-13!7;UBERON:0009663!5.83e-13!7;UBERON:0000200!2.52e-11!6;UBERON:0000025!3.15e-11!194;UBERON:0001871!2.44e-10!7;UBERON:0001872!7.40e-10!5;UBERON:0000349!1.79e-09!5;UBERON:0004111!2.64e-09!241;UBERON:0003076!2.02e-08!15;UBERON:0003057!2.02e-08!15;UBERON:0002298!2.98e-08!8;UBERON:0003296!5.25e-08!4;UBERON:0010133!5.25e-08!4;UBERON:0000369!1.30e-07!4;UBERON:0002435!1.30e-07!4;UBERON:0000204!1.30e-07!4;UBERON:0010082!1.30e-07!4;UBERON:0000064!2.53e-07!219;UBERON:0000922!5.64e-07!612;UBERON:0000477!6.18e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.60e-55;41!UBERON:0001890;4.60e-55;41!UBERON:0001893;6.87e-51;34!UBERON:0003528;4.30e-50;34!UBERON:0002020;4.30e-50;34!UBERON:0000073;4.01e-47;53!UBERON:0002616;4.01e-47;53!UBERON:0002791;7.72e-47;32!UBERON:0001869;8.16e-47;32!UBERON:0002619;1.39e-43;22!UBERON:0000956;5.28e-38;25!UBERON:0000203;5.28e-38;25!UBERON:0001950;7.26e-38;20!UBERON:0000955;1.25e-25;68!UBERON:0001017;1.66e-24;75!UBERON:0001016;1.69e-24;83!UBERON:0000125;2.37e-23;9!UBERON:0002308;2.37e-23;9!UBERON:0001894;2.98e-23;7!UBERON:0000200;5.64e-20;6!UBERON:0002420;4.75e-18;9!UBERON:0007245;4.75e-18;9!UBERON:0010009;4.75e-18;9!UBERON:0010011;4.75e-18;9!UBERON:0000454;4.75e-18;9!UBERON:0009663;1.62e-17;7!UBERON:0001872;2.69e-17;5!UBERON:0007023;3.51e-15;114!UBERON:0002784;1.14e-14;4!UBERON:0002298;1.07e-13;6!UBERON:0003296;1.49e-13;4!UBERON:0010133;1.49e-13;4!UBERON:0011216;1.78e-11;132!UBERON:0000349;3.69e-11;5!UBERON:0001870;5.97e-11;3!UBERON:0000988;7.69e-11;3!UBERON:0002240;2.46e-10;3!UBERON:0005174;2.46e-10;3!UBERON:0001137;2.46e-10;3!UBERON:0004732;7.95e-09;13!UBERON:0005162;1.34e-08;2!UBERON:0000122;1.34e-08;2!UBERON:0001875;1.52e-08;2!UBERON:0006514;1.52e-08;2!UBERON:0001897;1.75e-08;2!UBERON:0010225;1.75e-08;2!UBERON:0000369;6.39e-08;4!UBERON:0002435;6.39e-08;4!UBERON:0000204;6.39e-08;4!UBERON:0001905;6.98e-08;2!UBERON:0002757;6.98e-08;2!UBERON:0010134;6.98e-08;2!UBERON:0005408;6.98e-08;2!UBERON:0001899;6.98e-08;2!UBERON:0001871;8.93e-08;6!UBERON:0002771;1.26e-07;2!UBERON:0001954;1.26e-07;2!UBERON:0003022;1.26e-07;2!UBERON:0002421;1.26e-07;2!UBERON:0002600;1.26e-07;2!UBERON:0010314;1.31e-07;132!UBERON:0002148;1.33e-07;2!UBERON:0002702;1.33e-07;2!UBERON:0006331;1.33e-07;2!UBERON:0009662;1.33e-07;2!UBERON:0000007;2.37e-07;2!UBERON:0002021;9.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.67e-91,56;UBERON:0005068,1.67e-91,56;UBERON:0006241,1.67e-91,56;UBERON:0007135,1.67e-91,56;UBERON:0000073,8.24e-83,53;UBERON:0002616,8.24e-83,53;UBERON:0002780,2.75e-81,41;UBERON:0001890,2.75e-81,41;UBERON:0003080,2.75e-81,41;UBERON:0006240,2.75e-81,41;UBERON:0001016,2.27e-71,89;UBERON:0001017,2.50e-69,81;UBERON:0000955,3.40e-65,68;UBERON:0006238,3.40e-65,68;UBERON:0003075,4.31e-63,82;UBERON:0007284,4.31e-63,82;UBERON:0001893,5.13e-60,34;UBERON:0002346,1.04e-59,86;UBERON:0003528,1.58e-59,34;UBERON:0002020,1.58e-59,34;UBERON:0003056,5.90e-56,61;UBERON:0002791,9.11e-54,32;UBERON:0001869,1.11e-53,32;UBERON:0010371,9.78e-53,104;UBERON:0007023,2.71e-45,114;UBERON:0002619,1.47e-43,22;UBERON:0000956,5.53e-38,25;UBERON:0000203,5.53e-38,25;UBERON:0001950,9.10e-38,20;UBERON:0004121,1.44e-37,171;UBERON:0000924,1.44e-37,171;UBERON:0006601,1.44e-37,171;UBERON:0010314,1.83e-37,132;UBERON:0011216,1.77e-30,223;UBERON:0000125,1.55e-23,9;UBERON:0002308,1.55e-23,9;UBERON:0001894,2.33e-23,7;UBERON:0006222,2.33e-23,7;UBERON:0000025,4.39e-21,192;UBERON:0000200,4.88e-20,6;UBERON:0002420,4.20e-18,9;UBERON:0007245,4.20e-18,9;UBERON:0010009,4.20e-18,9;UBERON:0010011,4.20e-18,9;UBERON:0000454,4.20e-18,9;UBERON:0009663,1.29e-17,7;UBERON:0001872,2.94e-17,5;UBERON:0004111,7.86e-16,240;UBERON:0002784,1.25e-14,4;UBERON:0002298,6.24e-14,6;UBERON:0003296,9.25e-14,4;UBERON:0010133,9.25e-14,4;UBERON:0003076,5.28e-13,15;UBERON:0003057,5.28e-13,15;UBERON:0000483,7.16e-12,306;UBERON:0000119,1.18e-11,309;UBERON:0000349,3.33e-11,5;UBERON:0001870,4.80e-11,3;UBERON:0000988,5.89e-11,3;UBERON:0002240,1.55e-10,3;UBERON:0005174,1.55e-10,3;UBERON:0001137,1.55e-10,3;UBERON:0004732,5.96e-09,13;UBERON:0005162,1.32e-08,2;UBERON:0000122,1.32e-08,2;UBERON:0001875,1.52e-08,2;UBERON:0006514,1.52e-08,2;UBERON:0001897,1.75e-08,2;UBERON:0010225,1.75e-08,2;UBERON:0000369,5.40e-08,4;UBERON:0002435,5.40e-08,4;UBERON:0000204,5.40e-08,4;UBERON:0010082,5.40e-08,4;UBERON:0001905,7.61e-08,2;UBERON:0002757,7.61e-08,2;UBERON:0010134,7.61e-08,2;UBERON:0005408,7.61e-08,2;UBERON:0001899,7.61e-08,2;UBERON:0001871,9.44e-08,6;UBERON:0001954,9.99e-08,2;UBERON:0003022,9.99e-08,2;UBERON:0002421,9.99e-08,2;UBERON:0002600,9.99e-08,2;UBERON:0002702,1.03e-07,2;UBERON:0002148,1.07e-07,2;UBERON:0006331,1.07e-07,2;UBERON:0009662,1.07e-07,2;UBERON:0000007,1.35e-07,2;UBERON:0002771,1.65e-07,2;UBERON:0000923,2.25e-07,560;UBERON:0010316,2.25e-07,560;UBERON:0005291,2.25e-07,560;UBERON:0006598,2.25e-07,560;UBERON:0010317,2.25e-07,560;UBERON:0002532,2.25e-07,560;UBERON:0002050,3.10e-07,564;UBERON:0000922,7.27e-07,592;UBERON:0004733,8.51e-07,12;UBERON:0002028,8.51e-07,12;UBERON:0007277,8.51e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.39138007897872,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,2.41197055220813,0,0,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.844175070377856,0,0.663475559587348,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,9.50355975027546,0,2.34264445725339,0,0,0,0.394584402849391,0,0.91821828489147,0,0,0,0,0,0.627865836814451,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,4.11520173713212,0,0,0.640358984218058,0,2.88180834308212,0,0.343189995723929,0,0,0,0,0,0,0,9.00630433064684,6.84526894459965,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,2.38568906942791,2.99647493445466,0.321506296930038,0.825236619583403,2.07720169014593,0,0,3.52347428616543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51286554000375,3.54427271986794,2.3184990331373,1.752673029891,0,1.77486482458964,2.85643453530364,0.276697269872462,0,0.303298235083296,1.14186133417987,0,0,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,3.23474434190045,0,1.31051565830417,0,0,0,0,0,0,0,0,0,4.36758730655925,0,5.26791734888599,1.02558182120378,0.504143392443436,3.04291910842559,2.58361033010962,12.8492478233239,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,3.37687923091973,2.34323429584154,2.68692835451539,3.17079050969534,3.28184885410932,0,0,0,0,2.67850917939143,3.02655349996942,1.82089681270989,2.95960848756687,0,0,0,3.39848664884159,3.55172977239385,0,0,0.235479278551542,1.72827148907602,0,0.913158720509496,0,0,0.78624198594322,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0.098150233615243,3.29178397452127,0,0,0,0.971421986118279,13.8024283442642,0.994753875806841,0,2.37186772281816,0,0.754814217833368,0.308696632431779,0,0.470317296361523,0,0.235676547101626,2.74831853960923,1.48523200163543,2.9585900930838,0,0,0,0,0,0,0,2.19100916473955,0,4.73020624399789,0,2.92363407820933,1.74540276136151,0.5290268405154,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0.275684698604535,0,0.682008283964155,2.41167717140561,5.80418607621146,6.20597975171371,0.213233981900981,0.714193294391221,0,0,0,0,0.808468755832877,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p2@KCNH8 | |||
}} |
Revision as of 17:48, 21 January 2014
Short description: | p2@KCNH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNH8_5end |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | -152bp_to_ENST00000328405_5end |
EntrezGene: | KCNH8 |
HGNC: | 18864 |
UniProt: | Q96L42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data