FFCP PHASE1:Hg19::chr11:2193037..2193053,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2193037..2193053,-
|short_description=p1@TH
|description=CAGE_peak_1_at_TH_5end
|association_with_transcript=-2bp_to_ENST00000324155,ENST00000381168,ENST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7054 | |EntrezGene=7054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11782 | |HGNC=11782 | ||
|UniProt=F8W8M5, | |TSSclassifier=strong | ||
|UniProt=F8W8M5,E7EQI0,P07101,P78428 | |||
|association_with_transcript=-2bp_to_ENST00000324155,ENST00000381168,ENST00000381175,ENST00000381178,NM_000360,NM_199292,NM_199293,uc001lvp.2,uc001lvq.2,uc001lvr.2,uc001lvs.2,uc001lvt.2,uc010qxj.1_5end | |||
|cluster_id=chr11:2193037..2193053,- | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_1_at_TH_5end | |||
|id=chr11:2193037..2193053,- | |||
|ontology_enrichment_celltype=CL:0000349!2.33e-07!3;CL:0002577!2.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.55e-14;3!CL:0000349;2.32e-10;19!CL:0002536;3.83e-10;2!CL:0000047;1.34e-09;2!CL:0000333;2.55e-08;5!CL:0002321;7.87e-07;15!CL:0000346;8.24e-07;3!CL:1000428;8.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.55e-14,3;CL:0000349,2.39e-10,19;CL:0002536,3.83e-10,2;CL:0000133,2.26e-07,59;CL:0000346,8.36e-07,3;CL:1000428,8.36e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.05e-09;2!UBERON:0006601;4.99e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.39e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.73e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.12e-32!94;UBERON:0001016!8.12e-32!94;UBERON:0001049!2.37e-30!57;UBERON:0005068!2.37e-30!57;UBERON:0006241!2.37e-30!57;UBERON:0007135!2.37e-30!57;UBERON:0001017!1.74e-29!82;UBERON:0005743!4.43e-29!86;UBERON:0002616!1.74e-25!59;UBERON:0000955!2.16e-24!69;UBERON:0006238!2.16e-24!69;UBERON:0002780!1.54e-23!41;UBERON:0001890!1.54e-23!41;UBERON:0006240!1.54e-23!41;UBERON:0004121!4.69e-23!169;UBERON:0003080!8.43e-23!42;UBERON:0000924!3.89e-22!173;UBERON:0006601!3.89e-22!173;UBERON:0003075!9.04e-22!86;UBERON:0007284!9.04e-22!86;UBERON:0007023!1.73e-20!115;UBERON:0002346!2.70e-20!90;UBERON:0003056!2.49e-17!61;UBERON:0002020!7.12e-17!34;UBERON:0003528!7.12e-17!34;UBERON:0001893!1.03e-16!34;UBERON:0002308!2.58e-16!9;UBERON:0000125!2.58e-16!9;UBERON:0002791!1.33e-15!33;UBERON:0000153!1.09e-14!129;UBERON:0007811!1.09e-14!129;UBERON:0000033!3.10e-14!123;UBERON:0001869!4.25e-14!32;UBERON:0009663!7.22e-13!7;UBERON:0002420!1.32e-12!9;UBERON:0007245!1.32e-12!9;UBERON:0010009!1.32e-12!9;UBERON:0010011!1.32e-12!9;UBERON:0000454!1.32e-12!9;UBERON:0000064!1.69e-12!219;UBERON:0002298!5.26e-12!8;UBERON:0005631!1.83e-10!14;UBERON:0000158!1.83e-10!14;UBERON:0001894!4.39e-09!7;UBERON:0006222!4.39e-09!7;UBERON:0001987!7.47e-09!4;UBERON:0004340!7.47e-09!4;UBERON:0000369!1.12e-08!4;UBERON:0002435!1.12e-08!4;UBERON:0000204!1.12e-08!4;UBERON:0010082!1.12e-08!4;UBERON:0003076!1.20e-08!15;UBERON:0003057!1.20e-08!15;UBERON:0004732!1.21e-08!13;UBERON:0000922!1.53e-07!612;UBERON:0003124!2.84e-07!7;UBERON:0004733!3.57e-07!12;UBERON:0002028!3.57e-07!12;UBERON:0007277!3.57e-07!12;UBERON:0001896!4.95e-07!3;UBERON:0005290!4.95e-07!3;UBERON:0010096!4.95e-07!3;UBERON:0005383!6.12e-07!3;UBERON:0005382!6.12e-07!3;UBERON:0000988!7.57e-07!3;UBERON:0006331!8.17e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;6.85e-25;6!UBERON:0000125;7.76e-22;9!UBERON:0002308;7.76e-22;9!UBERON:0000369;6.00e-17;4!UBERON:0002435;6.00e-17;4!UBERON:0000204;6.00e-17;4!UBERON:0004732;3.49e-15;13!UBERON:0009663;1.01e-14;7!UBERON:0001896;1.69e-13;3!UBERON:0005290;1.69e-13;3!UBERON:0005383;3.45e-13;3!UBERON:0005382;3.45e-13;3!UBERON:0000988;3.75e-13;3!UBERON:0004733;3.91e-12;12!UBERON:0002028;3.91e-12;12!UBERON:0000073;1.28e-11;53!UBERON:0002616;1.28e-11;53!UBERON:0002420;2.17e-11;9!UBERON:0007245;2.17e-11;9!UBERON:0010009;2.17e-11;9!UBERON:0010011;2.17e-11;9!UBERON:0000454;2.17e-11;9!UBERON:0001987;9.71e-11;4!UBERON:0005162;8.20e-10;2!UBERON:0000122;8.20e-10;2!UBERON:0001873;2.05e-09;2!UBERON:0002148;2.23e-09;2!UBERON:0006331;2.23e-09;2!UBERON:0009662;2.23e-09;2!UBERON:0001017;1.05e-08;75!UBERON:0000013;2.55e-08;5!UBERON:0002410;2.55e-08;5!UBERON:0000478;5.47e-08;24!UBERON:0000010;6.62e-08;8!UBERON:0001016;1.75e-07;83!UBERON:0000955;2.96e-07;68!UBERON:0005631;5.12e-07;10!UBERON:0000158;5.12e-07;10!UBERON:0000412;8.24e-07;3!UBERON:0001992;8.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,8.81e-25,6;UBERON:0001016,4.57e-22,89;UBERON:0000125,8.68e-22,9;UBERON:0002308,8.68e-22,9;UBERON:0004121,4.74e-17,171;UBERON:0000924,4.74e-17,171;UBERON:0006601,4.74e-17,171;UBERON:0000369,4.88e-17,4;UBERON:0002435,4.88e-17,4;UBERON:0000204,4.88e-17,4;UBERON:0010082,4.88e-17,4;UBERON:0001017,9.86e-17,81;UBERON:0000073,7.81e-16,53;UBERON:0002616,7.81e-16,53;UBERON:0004732,3.97e-15,13;UBERON:0001049,8.32e-15,56;UBERON:0005068,8.32e-15,56;UBERON:0006241,8.32e-15,56;UBERON:0007135,8.32e-15,56;UBERON:0009663,9.42e-15,7;UBERON:0005631,2.05e-14,14;UBERON:0000158,2.05e-14,14;UBERON:0001896,1.80e-13,3;UBERON:0005290,1.80e-13,3;UBERON:0010096,1.80e-13,3;UBERON:0005383,2.86e-13,3;UBERON:0005382,2.86e-13,3;UBERON:0000988,4.52e-13,3;UBERON:0000955,5.41e-13,68;UBERON:0006238,5.41e-13,68;UBERON:0004733,4.41e-12,12;UBERON:0002028,4.41e-12,12;UBERON:0007277,4.41e-12,12;UBERON:0003075,6.90e-12,82;UBERON:0007284,6.90e-12,82;UBERON:0002420,2.06e-11,9;UBERON:0007245,2.06e-11,9;UBERON:0010009,2.06e-11,9;UBERON:0010011,2.06e-11,9;UBERON:0000454,2.06e-11,9;UBERON:0002346,3.75e-11,86;UBERON:0010371,4.63e-11,104;UBERON:0001987,9.71e-11,4;UBERON:0004340,9.71e-11,4;UBERON:0003124,4.24e-10,7;UBERON:0005162,7.69e-10,2;UBERON:0000122,7.69e-10,2;UBERON:0007023,9.97e-10,114;UBERON:0003076,1.55e-09,15;UBERON:0003057,1.55e-09,15;UBERON:0001873,1.97e-09,2;UBERON:0010122,1.97e-09,2;UBERON:0002148,2.87e-09,2;UBERON:0006331,2.87e-09,2;UBERON:0009662,2.87e-09,2;UBERON:0000013,2.75e-08,5;UBERON:0002410,2.75e-08,5;UBERON:0000478,5.59e-08,24;UBERON:0000010,6.99e-08,8;UBERON:0002780,7.11e-08,41;UBERON:0001890,7.11e-08,41;UBERON:0003080,7.11e-08,41;UBERON:0006240,7.11e-08,41;UBERON:0010314,8.62e-08,132;UBERON:0003056,4.44e-07,61;UBERON:0011216,6.44e-07,223;UBERON:0000412,8.36e-07,3;UBERON:0001992,8.36e-07,3 | |||
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| ||
|short_description=p1@TH | |||
}} | }} |
Latest revision as of 09:06, 17 September 2015
Short description: | p1@TH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TH_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | -2bp_to_ENST00000324155, ENST00000381168, ENST00000381175, ENST00000381178, NM_000360, NM_199292, NM_199293, uc001lvp.2, uc001lvq.2, uc001lvr.2, uc001lvs.2, uc001lvt.2, uc010qxj.1_5end |
EntrezGene: | TH |
HGNC: | 11782 |
UniProt: | F8W8M5E7EQI0P07101P78428 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.55e-14 | 3 |
extraembryonic cell | 2.39e-10 | 19 |
amniotic epithelial cell | 3.83e-10 | 2 |
neurectodermal cell | 2.26e-07 | 59 |
hair follicle dermal papilla cell | 8.36e-07 | 3 |
stem cell of epidermis | 8.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.73e-07 | 6 |