FFCP PHASE1:Hg19::chr12:120780450..120780454,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3245 | |||
|description=CAGE_peak_at_chr12:120780450..120780454,- | |||
|id=chr12:120780450..120780454,- | |||
|ontology_enrichment_celltype=CL:0002319!1.51e-11!25;CL:0000047!2.38e-09!8;CL:0000133!9.60e-09!59;CL:0000540!2.27e-07!6;CL:0000031!2.27e-07!6;CL:0000404!2.27e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.13e-15;25!CL:0000540;2.81e-11;6!CL:0000404;2.81e-11;6!CL:0002321;4.02e-09;15!CL:0002322;9.41e-09;5!CL:0000333;8.72e-08;5!CL:0002605;4.94e-07;3!CL:0000128;9.46e-07;7!CL:0000126;9.46e-07;7!CL:0000127;9.46e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.32e-15,25;CL:0000133,4.82e-15,59;CL:0000047,9.58e-15,8;CL:0000540,2.11e-11,6;CL:0000031,2.11e-11,6;CL:0000404,2.11e-11,6;CL:0000221,5.88e-11,72;CL:0002322,6.73e-09,5;CL:0000333,2.85e-07,41;CL:0002605,5.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;2.81e-11;6!CL:0000133;1.64e-08;59!UBERON:0006601;2.95e-07;82 | |||
|ontology_enrichment_disease=DOID:3095!9.32e-13!22;DOID:2994!9.32e-13!22;DOID:0050687!5.27e-10!143;DOID:171!9.82e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.39e-13;22!DOID:2994;5.39e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.43e-13,22;DOID:2994,5.43e-13,22;DOID:171,9.48e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.88e-40!94;UBERON:0001016!3.88e-40!94;UBERON:0005743!8.38e-38!86;UBERON:0001017!1.99e-34!82;UBERON:0002346!2.69e-30!90;UBERON:0003075!4.81e-28!86;UBERON:0007284!4.81e-28!86;UBERON:0001049!1.16e-25!57;UBERON:0005068!1.16e-25!57;UBERON:0006241!1.16e-25!57;UBERON:0007135!1.16e-25!57;UBERON:0000924!4.65e-25!173;UBERON:0006601!4.65e-25!173;UBERON:0000955!7.74e-25!69;UBERON:0006238!7.74e-25!69;UBERON:0004121!3.67e-23!169;UBERON:0003056!1.13e-22!61;UBERON:0002616!1.66e-21!59;UBERON:0002780!1.34e-20!41;UBERON:0001890!1.34e-20!41;UBERON:0006240!1.34e-20!41;UBERON:0003080!8.51e-20!42;UBERON:0000033!2.17e-19!123;UBERON:0000153!3.54e-18!129;UBERON:0007811!3.54e-18!129;UBERON:0002020!1.24e-17!34;UBERON:0003528!1.24e-17!34;UBERON:0001893!1.46e-17!34;UBERON:0002791!3.91e-17!33;UBERON:0001869!3.09e-16!32;UBERON:0000956!8.87e-14!25;UBERON:0000203!8.87e-14!25;UBERON:0007023!7.58e-13!115;UBERON:0002619!5.58e-11!22;UBERON:0001950!5.96e-11!20;UBERON:0000922!7.29e-10!612;UBERON:0000481!2.36e-08!347;UBERON:0000064!2.99e-08!219;UBERON:0000483!5.76e-08!309;UBERON:0000119!6.94e-08!312;UBERON:0000468!1.08e-07!659;UBERON:0000025!1.17e-07!194;UBERON:0000923!1.94e-07!604;UBERON:0005291!1.94e-07!604;UBERON:0006598!1.94e-07!604;UBERON:0002532!1.94e-07!604;UBERON:0002050!2.39e-07!605;UBERON:0005423!2.39e-07!605;UBERON:0000475!4.45e-07!365;UBERON:0003076!4.57e-07!15;UBERON:0003057!4.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.80e-15;41!UBERON:0001890;5.80e-15;41!UBERON:0002791;3.12e-14;32!UBERON:0000922;3.49e-14;49!UBERON:0001893;2.24e-13;34!UBERON:0000956;4.17e-13;25!UBERON:0000203;4.17e-13;25!UBERON:0001869;5.80e-13;32!UBERON:0000073;1.11e-12;53!UBERON:0002616;1.11e-12;53!UBERON:0003528;1.25e-12;34!UBERON:0002020;1.25e-12;34!UBERON:0001016;4.24e-11;83!UBERON:0001017;3.36e-10;75!UBERON:0002104;1.58e-09;21!UBERON:0001032;1.66e-09;24!UBERON:0004456;1.66e-09;24!UBERON:0002619;3.19e-09;22!UBERON:0007625;6.16e-09;11!UBERON:0000966;9.18e-09;5!UBERON:0005388;9.18e-09;5!UBERON:0001802;9.18e-09;5!UBERON:0001950;1.13e-08;20!UBERON:0000020;1.27e-08;23!UBERON:0000955;1.30e-08;68!UBERON:0000970;1.31e-08;20!UBERON:0000013;8.72e-08;5!UBERON:0002410;8.72e-08;5!UBERON:0000019;2.14e-07;19!UBERON:0000047;2.14e-07;19!UBERON:0004088;2.14e-07;19!UBERON:0010230;2.14e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.79e-36,89;UBERON:0001017,3.97e-31,81;UBERON:0002346,4.29e-27,86;UBERON:0003056,1.41e-26,61;UBERON:0003075,3.25e-26,82;UBERON:0007284,3.25e-26,82;UBERON:0004121,1.93e-25,171;UBERON:0000924,1.93e-25,171;UBERON:0006601,1.93e-25,171;UBERON:0000955,4.56e-21,68;UBERON:0006238,4.56e-21,68;UBERON:0001049,2.83e-20,56;UBERON:0005068,2.83e-20,56;UBERON:0006241,2.83e-20,56;UBERON:0007135,2.83e-20,56;UBERON:0000073,3.78e-20,53;UBERON:0002616,3.78e-20,53;UBERON:0002780,3.82e-19,41;UBERON:0001890,3.82e-19,41;UBERON:0003080,3.82e-19,41;UBERON:0006240,3.82e-19,41;UBERON:0010371,4.99e-19,104;UBERON:0003528,1.89e-15,34;UBERON:0002020,1.89e-15,34;UBERON:0001893,2.24e-15,34;UBERON:0002791,4.32e-15,32;UBERON:0011216,6.06e-15,223;UBERON:0001869,1.75e-13,32;UBERON:0010314,2.73e-13,132;UBERON:0000956,4.49e-13,25;UBERON:0000203,4.49e-13,25;UBERON:0000966,2.98e-10,6;UBERON:0005388,2.98e-10,6;UBERON:0001802,2.98e-10,6;UBERON:0000970,8.64e-10,21;UBERON:0002104,8.64e-10,21;UBERON:0000020,9.31e-10,24;UBERON:0001032,9.31e-10,24;UBERON:0004456,9.31e-10,24;UBERON:0007625,2.80e-09,11;UBERON:0002619,3.38e-09,22;UBERON:0001950,1.24e-08,20;UBERON:0000019,1.58e-08,20;UBERON:0000047,1.58e-08,20;UBERON:0010312,1.58e-08,20;UBERON:0004088,1.58e-08,20;UBERON:0010230,1.58e-08,20;UBERON:0003072,1.58e-08,20;UBERON:0004128,1.58e-08,20;UBERON:0003071,1.58e-08,20;UBERON:0000922,3.07e-08,592;UBERON:0000013,6.48e-08,5;UBERON:0002410,6.48e-08,5;UBERON:0001456,1.66e-07,22;UBERON:0001781,6.99e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0.61560529038394,0,5.95563970808367,13.4530913951597,13.6874425072884,11.0477522843426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,5.0103453096956,2.88248216701333,2.63504357079378,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82960559194393,2.38553582978673,3.36962434321603,3.52447587052259,5.55105871926382,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,1.35287282397425,0.514703430895577,0,0,0,0.0925884451585296,0,0,2.88662684050547,12.9842053572086,0,0,0,0,0,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36874410245144,5.20559415430487,6.95959931499926,6.03058555203656,12.7587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29632954224082,0,0,0,0,0,0.451199612907412,1.77135275340154,1.56869953835371,1.46139224653261,0.633309773357254,0,0,0,0,0,1.00337954770971,0.764628819135115,0.831076008928724,1.11937377361089,0,0,4.35965212697862,1.96808787419823,1.95227036798582,0,0.54941678891006,0.82509499920588,0,0,0,0.96670718292122,0.154048617114644,0,0.137836572484531,0.214840489736547,0.145016693914229,0.426133137080504,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,2.02965735142199,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,2.11004124615769,0,0,5.27813520319984,0,0.276283915531148,5.03865495708552,1.22722419002586,0,0,0,0,0,0,0,0,0,1.11321717794222,3.99227596002388,1.82299432759663,0,0,0,0,0.709163045303809,6.89486746482929,3.2076507472158,2.77799991893268,0,1.68835014075571,0,0.552896299656123,0.591095237907095,1.09692698576986,0,0.278847488557207,0.769502585037971,0,0.23056390438806,2.15418346583453,2.7161842980502,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,1.69623685720729,4.32777279484182,0,0.265372693510018,1.22206028986725,3.85477467284809,6.54888876416465,5.11667552576731,1.28062152663286,0,1.1713222286267,0,1.17398771359254,0.485560759068186,0.789168805698781,2.41981432097328,4.89716418608784,0.189559738885464,1.35291077473043,3.00695755052017,0,0,0,0,1.42304773014896,0.138674673013139,0.520679215005393,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0.264768380074501,11.2990370390266,0,0,0.886351143382302,0.782205530939212,0,0.213452994739353,0.599428828746391,0.144090417154106,4.35239065430479,3.26030495937733,0,0.869767748958028,0.471388069233591,0.815425236441684,1.04602846312333,0,0.866851769704557,0.600420288709789,1.50595916781192,0,0,0,1.11712960508902,0.687481272035051,0,0.599037001496973,0.858452096273142,0.669514372325618,0.739018197353989,0,3.49487848582361,0.472699093843342,0.0824158583811665,0.13480708770837,0.295282444544246,0,0,3.81369537112412,7.71615112632092,5.91419577368105,1.66176135211674,0,0,0.607495566580247,0,0.0788057072991982,1.41627387964495,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,1.32506888912221,0.646414781807753,1.58679122091228,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,2.19875734750328,0.886068179966986,1.22026264901963,1.3771002377715,1.72022758707021,1.88579387612649,0.683060432355218,3.32036723846954,0,0,0.570930667089935,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0.782982875895635,0,0,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0.967809053062115,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,10.998915932114,1.61737217095023,1.88719130227076,1.52893493468819,1.18812770967818,0.850299680406731,0.495743057036009,1.11728983594649,0,0,0,0,0,0.706521476061055,0,2.39450788585727,2.2562800066483,4.28521883576921,0.96820153449905,0.807378228159255,1.42769420259154,0,2.47736419030255,0,3.58129565066048,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0.607838261565552,0,1.44680757550829,0.887821342714695,6.01672289920042,0,0,1.75871244359621,0.255524855279191,0.535701835878287,3.69912094440706,1.21393120847326,1.59363533945908,0,0,0,1.01954599465248,1.38122824481983,0.590969204419841,0,0.549451649953598,1.41404030924402,0,2.73947616152849,0,0,5.28926426907257,9.95485753916178,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.67113259078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| |||
|short_description=p@chr12:120780450..120780454,- | |||
}} |
Revision as of 16:16, 11 January 2014
Short description: | p@chr12:120780450..120780454, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:120780450..120780454, - |
Coexpression cluster: | C3245_Astrocyte_Lens_Neural_eye_medulloblastoma_neuroblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.32e-15 | 25 |
neurectodermal cell | 4.82e-15 | 59 |
neuronal stem cell | 9.58e-15 | 8 |
neuron | 2.11e-11 | 6 |
neuroblast | 2.11e-11 | 6 |
electrically signaling cell | 2.11e-11 | 6 |
ectodermal cell | 5.88e-11 | 72 |
embryonic stem cell | 6.73e-09 | 5 |
migratory neural crest cell | 2.85e-07 | 41 |
astrocyte of the cerebral cortex | 5.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.43e-13 | 22 |
germ cell cancer | 5.43e-13 | 22 |
neuroectodermal tumor | 9.48e-07 | 10 |