FFCP PHASE1:Hg19::chr8:9953136..9953190,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4482|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7377|TSSclassifier=S|UniProt=Q9UJ68|association_with_transcript=-46bp_to_ENST00000382490,ENST00000523637_5end|coexpression_cluster_id=C335|description=CAGE_peak_3_at_MSRA_5end|id=chr8:9953136..9953190,+|ontology_enrichment_celltype=CL:0000128!1.56e-09!7;CL:0000126!1.56e-09!7;CL:0000127!1.56e-09!7;CL:0002453!1.56e-09!7;CL:0002319!9.12e-09!25;CL:0000047!1.90e-07!8|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,1.82e-09,8|ontology_enrichment_development_v019=UBERON:0006601;1.06e-22;82!UBERON:0006215;1.09e-10;3!UBERON:0006241;3.46e-09;3!UBERON:0003057;3.46e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.81e-106!82;UBERON:0001049!3.25e-105!57;UBERON:0005068!3.25e-105!57;UBERON:0006241!3.25e-105!57;UBERON:0007135!3.25e-105!57;UBERON:0005743!2.64e-100!86;UBERON:0000073!1.46e-98!94;UBERON:0001016!1.46e-98!94;UBERON:0002616!8.16e-93!59;UBERON:0000955!1.85e-89!69;UBERON:0006238!1.85e-89!69;UBERON:0002780!2.23e-76!41;UBERON:0001890!2.23e-76!41;UBERON:0006240!2.23e-76!41;UBERON:0002346!9.53e-75!90;UBERON:0003080!2.61e-74!42;UBERON:0003075!5.15e-70!86;UBERON:0007284!5.15e-70!86;UBERON:0001893!2.04e-67!34;UBERON:0002020!3.43e-67!34;UBERON:0003528!3.43e-67!34;UBERON:0002791!2.93e-65!33;UBERON:0001869!1.35e-63!32;UBERON:0000924!1.87e-56!173;UBERON:0006601!1.87e-56!173;UBERON:0004121!1.93e-52!169;UBERON:0000956!3.16e-50!25;UBERON:0000203!3.16e-50!25;UBERON:0003056!9.88e-48!61;UBERON:0000033!9.79e-46!123;UBERON:0002619!1.73e-45!22;UBERON:0000153!6.91e-43!129;UBERON:0007811!6.91e-43!129;UBERON:0001950!3.50e-41!20;UBERON:0007023!2.39e-39!115;UBERON:0003076!2.30e-30!15;UBERON:0003057!2.30e-30!15;UBERON:0004732!2.52e-26!13;UBERON:0004733!1.46e-24!12;UBERON:0002028!1.46e-24!12;UBERON:0007277!1.46e-24!12;UBERON:0000025!3.00e-21!194;UBERON:0002680!8.90e-19!9;UBERON:0001895!8.90e-19!9;UBERON:0010092!8.90e-19!9;UBERON:0002420!2.15e-18!9;UBERON:0007245!2.15e-18!9;UBERON:0010009!2.15e-18!9;UBERON:0010011!2.15e-18!9;UBERON:0000454!2.15e-18!9;UBERON:0002308!5.70e-18!9;UBERON:0000125!5.70e-18!9;UBERON:0009663!2.05e-14!7;UBERON:0000200!2.24e-14!6;UBERON:0004111!3.00e-14!241;UBERON:0001871!3.71e-14!7;UBERON:0000064!1.54e-13!219;UBERON:0000483!1.59e-13!309;UBERON:0002037!1.93e-13!6;UBERON:0006215!1.93e-13!6;UBERON:0000119!3.06e-13!312;UBERON:0002298!9.68e-13!8;UBERON:0001872!2.21e-12!5;UBERON:0000477!2.48e-12!286;UBERON:0000475!5.00e-12!365;UBERON:0000349!7.05e-12!5;UBERON:0002021!1.29e-11!5;UBERON:0001894!2.44e-10!7;UBERON:0006222!2.44e-10!7;UBERON:0000369!8.35e-09!4;UBERON:0002435!8.35e-09!4;UBERON:0000204!8.35e-09!4;UBERON:0010082!8.35e-09!4;UBERON:0000922!2.24e-08!612;UBERON:0000923!3.10e-08!604;UBERON:0005291!3.10e-08!604;UBERON:0006598!3.10e-08!604;UBERON:0002532!3.10e-08!604;UBERON:0002050!3.46e-08!605;UBERON:0005423!3.46e-08!605;UBERON:0002771!4.13e-08!3;UBERON:0001896!1.89e-07!3;UBERON:0005290!1.89e-07!3;UBERON:0010096!1.89e-07!3;UBERON:0002240!1.93e-07!3;UBERON:0000062!2.65e-07!511;UBERON:0006331!3.79e-07!3;UBERON:0000988!5.12e-07!3;UBERON:0005383!7.99e-07!3;UBERON:0005382!7.99e-07!3;UBERON:0000468!9.13e-07!659|ontology_enrichment_uberon_v019=UBERON:0001893;6.84e-62;34!UBERON:0003528;2.40e-61;34!UBERON:0002020;2.40e-61;34!UBERON:0001869;7.47e-61;32!UBERON:0002791;1.35e-60;32!UBERON:0002619;9.33e-59;22!UBERON:0000073;8.57e-58;53!UBERON:0002616;8.57e-58;53!UBERON:0002780;3.04e-57;41!UBERON:0001890;3.04e-57;41!UBERON:0001950;3.50e-53;20!UBERON:0000956;3.08e-51;25!UBERON:0000203;3.08e-51;25!UBERON:0001017;2.56e-41;75!UBERON:0000955;2.26e-40;68!UBERON:0001016;3.97e-36;83!UBERON:0004732;1.42e-24;13!UBERON:0002420;2.27e-23;9!UBERON:0007245;2.27e-23;9!UBERON:0010009;2.27e-23;9!UBERON:0010011;2.27e-23;9!UBERON:0000454;2.27e-23;9!UBERON:0000125;9.65e-23;9!UBERON:0002308;9.65e-23;9!UBERON:0004733;2.41e-22;12!UBERON:0002028;2.41e-22;12!UBERON:0009663;3.25e-18;7!UBERON:0000200;4.06e-18;6!UBERON:0002298;4.26e-16;6!UBERON:0001872;1.53e-15;5!UBERON:0001871;2.84e-15;6!UBERON:0002680;4.17e-15;9!UBERON:0001895;4.17e-15;9!UBERON:0000349;6.98e-15;5!UBERON:0002021;1.03e-14;5!UBERON:0007023;2.31e-14;114!UBERON:0011216;8.81e-13;132!UBERON:0000369;6.25e-11;4!UBERON:0002435;6.25e-11;4!UBERON:0000204;6.25e-11;4!UBERON:0002784;7.07e-11;4!UBERON:0001870;5.65e-10;3!UBERON:0001894;1.88e-09;7!UBERON:0001896;3.22e-09;3!UBERON:0005290;3.22e-09;3!UBERON:0002240;3.46e-09;3!UBERON:0005174;3.46e-09;3!UBERON:0001137;3.46e-09;3!UBERON:0010314;4.99e-09;132!UBERON:0002037;1.38e-08;6!UBERON:0000988;1.40e-08;3!UBERON:0005383;2.23e-08;3!UBERON:0005382;2.23e-08;3!UBERON:0004121;2.24e-07;165!UBERON:0002702;2.50e-07;2!UBERON:0002346;3.18e-07;4!UBERON:0000923;3.18e-07;4!UBERON:0010316;3.18e-07;4!UBERON:0005291;3.18e-07;4!UBERON:0002771;3.19e-07;2!UBERON:0001954;3.77e-07;2!UBERON:0003022;3.77e-07;2!UBERON:0002421;3.77e-07;2!UBERO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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7377 | |||
|TSSclassifier=S | |||
|UniProt=Q9UJ68 | |||
|association_with_transcript=-46bp_to_ENST00000382490,ENST00000523637_5end | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_3_at_MSRA_5end | |||
|id=chr8:9953136..9953190,+ | |||
|ontology_enrichment_celltype=CL:0000128!1.56e-09!7;CL:0000126!1.56e-09!7;CL:0000127!1.56e-09!7;CL:0002453!1.56e-09!7;CL:0002319!9.12e-09!25;CL:0000047!1.90e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.82e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-22;82!UBERON:0006215;1.09e-10;3!UBERON:0006241;3.46e-09;3!UBERON:0003057;3.46e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@MSRA | |||
}} |
Revision as of 06:33, 14 September 2013
Short description: | p3@MSRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MSRA_5end |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | -46bp_to_ENST00000382490, ENST00000523637_5end |
EntrezGene: | MSRA |
HGNC: | 7377 |
UniProt: | Q9UJ68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.82e-09 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.