FFCP PHASE1:Hg19::chr1:205198803..205198808,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24239 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_ENST00000495538_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_TMCC2_5end | |||
|id=chr1:205198803..205198808,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.84e-14;82!UBERON:0006241;1.81e-12;3!UBERON:0003057;1.81e-12;3!UBERON:0005425;5.54e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-74!57;UBERON:0005068!1.71e-74!57;UBERON:0006241!1.71e-74!57;UBERON:0007135!1.71e-74!57;UBERON:0007023!4.54e-64!115;UBERON:0002616!5.92e-64!59;UBERON:0002780!9.10e-63!41;UBERON:0001890!9.10e-63!41;UBERON:0006240!9.10e-63!41;UBERON:0000955!1.32e-61!69;UBERON:0006238!1.32e-61!69;UBERON:0003080!4.43e-61!42;UBERON:0001017!5.81e-56!82;UBERON:0005743!2.77e-55!86;UBERON:0002020!1.21e-54!34;UBERON:0003528!1.21e-54!34;UBERON:0001893!1.67e-54!34;UBERON:0000073!5.96e-54!94;UBERON:0001016!5.96e-54!94;UBERON:0002791!2.98e-52!33;UBERON:0001869!3.33e-49!32;UBERON:0003075!6.36e-48!86;UBERON:0007284!6.36e-48!86;UBERON:0002346!2.78e-45!90;UBERON:0003056!7.39e-42!61;UBERON:0002619!3.35e-38!22;UBERON:0000153!2.88e-34!129;UBERON:0007811!2.88e-34!129;UBERON:0001950!1.71e-33!20;UBERON:0000956!3.65e-33!25;UBERON:0000203!3.65e-33!25;UBERON:0000033!5.95e-33!123;UBERON:0004121!9.92e-25!169;UBERON:0002308!4.26e-24!9;UBERON:0000125!4.26e-24!9;UBERON:0000924!7.07e-24!173;UBERON:0006601!7.07e-24!173;UBERON:0002420!1.18e-23!9;UBERON:0007245!1.18e-23!9;UBERON:0010009!1.18e-23!9;UBERON:0010011!1.18e-23!9;UBERON:0000454!1.18e-23!9;UBERON:0009663!6.42e-19!7;UBERON:0000025!7.55e-18!194;UBERON:0002298!1.92e-17!8;UBERON:0001871!3.65e-16!7;UBERON:0003076!2.31e-14!15;UBERON:0003057!2.31e-14!15;UBERON:0000349!1.54e-13!5;UBERON:0004732!2.67e-13!13;UBERON:0004111!4.22e-12!241;UBERON:0004733!4.37e-11!12;UBERON:0002028!4.37e-11!12;UBERON:0007277!4.37e-11!12;UBERON:0000477!4.75e-11!286;UBERON:0000200!4.87e-11!6;UBERON:0000369!5.94e-11!4;UBERON:0002435!5.94e-11!4;UBERON:0000204!5.94e-11!4;UBERON:0010082!5.94e-11!4;UBERON:0000064!7.79e-11!219;UBERON:0000483!1.32e-10!309;UBERON:0000119!2.20e-10!312;UBERON:0000178!1.10e-09!15;UBERON:0000179!1.10e-09!15;UBERON:0000463!1.10e-09!15;UBERON:0006331!1.19e-09!3;UBERON:0001894!1.53e-09!7;UBERON:0006222!1.53e-09!7;UBERON:0001896!1.54e-09!3;UBERON:0005290!1.54e-09!3;UBERON:0010096!1.54e-09!3;UBERON:0000988!1.58e-09!3;UBERON:0001872!2.86e-09!5;UBERON:0002021!8.70e-09!5;UBERON:0002771!8.81e-09!3;UBERON:0005383!1.15e-08!3;UBERON:0005382!1.15e-08!3;UBERON:0000475!1.06e-07!365;UBERON:0005162!3.26e-07!2;UBERON:0000122!3.26e-07!2;UBERON:0001897!5.32e-07!2;UBERON:0001875!6.49e-07!2;UBERON:0006514!6.49e-07!2;UBERON:0002148!7.27e-07!2;UBERON:0009662!7.27e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;6.28e-49;6!UBERON:0004732;1.18e-39;13!UBERON:0004733;7.38e-33;12!UBERON:0002028;7.38e-33;12!UBERON:0000073;1.80e-28;53!UBERON:0002616;1.80e-28;53!UBERON:0000988;1.39e-25;3!UBERON:0001896;3.64e-25;3!UBERON:0005290;3.64e-25;3!UBERON:0000125;2.53e-23;9!UBERON:0002308;2.53e-23;9!UBERON:0003528;3.12e-22;34!UBERON:0002020;3.12e-22;34!UBERON:0002780;2.98e-21;41!UBERON:0001890;2.98e-21;41!UBERON:0001893;2.58e-19;34!UBERON:0001017;3.73e-19;75!UBERON:0005162;2.14e-18;2!UBERON:0000122;2.14e-18;2!UBERON:0001016;3.35e-18;83!UBERON:0001897;8.41e-18;2!UBERON:0002148;8.41e-18;2!UBERON:0001875;8.41e-18;2!UBERON:0006331;8.41e-18;2!UBERON:0009662;8.41e-18;2!UBERON:0006514;8.41e-18;2!UBERON:0010225;8.41e-18;2!UBERON:0000955;9.03e-18;68!UBERON:0002791;1.66e-16;32!UBERON:0002680;5.43e-15;9!UBERON:0001895;5.43e-15;9!UBERON:0001869;5.82e-14;32!UBERON:0001950;9.96e-14;20!UBERON:0002619;1.70e-12;22!UBERON:0002240;1.81e-12;3!UBERON:0005174;1.81e-12;3!UBERON:0001137;1.81e-12;3!UBERON:0009663;1.74e-11;7!UBERON:0001871;3.93e-11;6!UBERON:0000956;5.29e-11;25!UBERON:0000203;5.29e-11;25!UBERON:0002336;3.74e-10;1!UBERON:0011215;3.74e-10;1!UBERON:0001018;3.74e-10;1!UBERON:0002473;3.74e-10;1!UBERON:0005340;3.74e-10;1!UBERON:0003544;3.74e-10;1!UBERON:0005970;3.74e-10;1!UBERON:0002316;3.74e-10;1!UBERON:0001020;3.74e-10;1!UBERON:0002437;3.74e-10;1!UBERON:0002038;5.54e-10;1!UBERON:0000941;5.54e-10;1!UBERON:0001785;5.54e-10;1!UBERON:0002464;5.54e-10;1!UBERON:0004904;5.54e-10;1!UBERON:0001021;5.54e-10;1!UBERON:0009661;5.54e-10;1!UBERON:0002950;5.54e-10;1!UBERON:0001891;5.54e-10;1!UBERON:0002784;2.31e-09;4!UBERON:0002420;4.81e-09;9!UBERON:0007245;4.81e-09;9!UBERON:0010009;4.81e-09;9!UBERON:0010011;4.81e-09;9!UBERON:0000454;4.81e-09;9!UBERON:0007023;1.52e-08;114!UBERON:0001872;1.71e-07;5!UBERON:0011216;8.31e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.11e-61,56;UBERON:0005068,8.11e-61,56;UBERON:0006241,8.11e-61,56;UBERON:0007135,8.11e-61,56;UBERON:0000073,3.99e-52,53;UBERON:0002616,3.99e-52,53;UBERON:0002298,4.72e-49,6;UBERON:0003075,4.21e-45,82;UBERON:0007284,4.21e-45,82;UBERON:0001017,4.93e-45,81;UBERON:0001016,2.03e-44,89;UBERON:0000955,4.61e-44,68;UBERON:0006238,4.61e-44,68;UBERON:0003076,1.99e-43,15;UBERON:0003057,1.99e-43,15;UBERON:0002346,7.06e-43,86;UBERON:0004732,1.02e-39,13;UBERON:0010371,5.84e-35,104;UBERON:0004733,7.24e-33,12;UBERON:0002028,7.24e-33,12;UBERON:0007277,7.24e-33,12;UBERON:0007023,5.59e-32,114;UBERON:0010314,6.84e-27,132;UBERON:0003528,1.03e-26,34;UBERON:0002020,1.03e-26,34;UBERON:0002780,1.69e-26,41;UBERON:0001890,1.69e-26,41;UBERON:0003080,1.69e-26,41;UBERON:0006240,1.69e-26,41;UBERON:0001896,1.87e-25,3;UBERON:0005290,1.87e-25,3;UBERON:0010096,1.87e-25,3;UBERON:0000988,2.04e-25,3;UBERON:0000125,4.31e-23,9;UBERON:0002308,4.31e-23,9;UBERON:0001893,3.43e-22,34;UBERON:0004121,7.02e-22,171;UBERON:0000924,7.02e-22,171;UBERON:0006601,7.02e-22,171;UBERON:0003056,1.63e-20,61;UBERON:0002791,5.32e-19,32;UBERON:0005162,1.73e-18,2;UBERON:0000122,1.73e-18,2;UBERON:0001897,7.43e-18,2;UBERON:0010225,7.43e-18,2;UBERON:0001875,1.34e-17,2;UBERON:0006514,1.34e-17,2;UBERON:0002148,1.88e-17,2;UBERON:0006331,1.88e-17,2;UBERON:0009662,1.88e-17,2;UBERON:0011216,6.05e-16,223;UBERON:0000025,1.30e-15,192;UBERON:0001869,6.37e-15,32;UBERON:0002680,7.15e-15,9;UBERON:0001895,7.15e-15,9;UBERON:0010092,7.15e-15,9;UBERON:0001950,1.21e-13,20;UBERON:0002619,2.03e-12,22;UBERON:0002240,2.15e-12,3;UBERON:0005174,2.15e-12,3;UBERON:0001137,2.15e-12,3;UBERON:0004111,8.36e-12,240;UBERON:0009663,1.87e-11,7;UBERON:0001871,5.38e-11,6;UBERON:0000956,6.19e-11,25;UBERON:0000203,6.19e-11,25;UBERON:0002336,3.74e-10,1;UBERON:0011215,3.74e-10,1;UBERON:0001018,3.74e-10,1;UBERON:0002473,3.74e-10,1;UBERON:0005340,3.74e-10,1;UBERON:0003544,3.74e-10,1;UBERON:0005970,3.74e-10,1;UBERON:0002316,3.74e-10,1;UBERON:0001020,3.74e-10,1;UBERON:0002437,3.74e-10,1;UBERON:0002038,4.09e-10,1;UBERON:0009661,4.09e-10,1;UBERON:0002950,4.09e-10,1;UBERON:0001891,4.09e-10,1;UBERON:0009616,4.09e-10,1;UBERON:0010286,4.09e-10,1;UBERON:0000941,4.46e-10,1;UBERON:0001785,4.46e-10,1;UBERON:0002464,4.46e-10,1;UBERON:0004904,4.46e-10,1;UBERON:0001021,4.46e-10,1;UBERON:0003902,4.46e-10,1;UBERON:0005425,4.46e-10,1;UBERON:0000483,1.24e-09,306;UBERON:0000119,1.67e-09,309;UBERON:0002784,2.17e-09,4;UBERON:0002420,5.09e-09,9;UBERON:0007245,5.09e-09,9;UBERON:0010009,5.09e-09,9;UBERON:0010011,5.09e-09,9;UBERON:0000454,5.09e-09,9;UBERON:0001872,1.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0.74214478529481,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.361789315876224,0,1.3269511191747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,3.77446344691791,0,0.702793337176017,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,2.60120219894787,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,2.38018683136842,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.876336514945499,1.72022758707021,1.44207766997908,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.389720617678777,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,2.8339315265117,0.478901577171454,0.41023272848151,0,0.414943514785307,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,1.56215619722769,1.44680757550829,0.951237152908602,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,1.69924332442079,0.591954962065642,0,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1593931382644,2.67341760294377,0,0,0,0,0,0,0,0,0,0,2.86679166302903,0,1.56380427439104,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,2.58582489654738,0,0,0,0.248298857183432,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TMCC2 | |||
}} |
Revision as of 23:42, 10 January 2014
Short description: | p6@TMCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMCC2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -51bp_to_ENST00000495538_5end |
EntrezGene: | TMCC2 |
HGNC: | 24239 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data