FFCP PHASE1:Hg19::chr5:36608318..36608354,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:36608318..36608354,+ to FFCP PHASE1:Hg19::chr5:36608318..36608354,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUV6 | |UniProt=E7EUV6 | ||
|association_with_transcript=38bp_to_ENST00000513646_5end | |||
|cluster_id=chr5:36608318..36608354,+ | |||
|coexpression_cluster_id=C1961 | |||
|description=CAGE_peak_2_at_SLC1A3_5end | |||
|id=chr5:36608318..36608354,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.92e-10;3!CL:0002619;2.05e-10;3!CL:0000047;1.24e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.16e-10,3;CL:0002619,2.63e-10,3;CL:0000047,4.21e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.28e-20;82!UBERON:0006215;5.43e-12;3!UBERON:0006241;1.92e-10;3!UBERON:0003057;1.92e-10;3!UBERON:0010122;5.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.56e-71!86;UBERON:0001017!2.88e-70!82;UBERON:0001049!5.58e-68!57;UBERON:0005068!5.58e-68!57;UBERON:0006241!5.58e-68!57;UBERON:0007135!5.58e-68!57;UBERON:0003075!6.04e-63!86;UBERON:0007284!6.04e-63!86;UBERON:0000073!1.22e-62!94;UBERON:0001016!1.22e-62!94;UBERON:0000955!1.34e-59!69;UBERON:0006238!1.34e-59!69;UBERON:0002346!2.38e-59!90;UBERON:0002616!5.40e-59!59;UBERON:0002020!4.90e-51!34;UBERON:0003528!4.90e-51!34;UBERON:0001893!1.50e-50!34;UBERON:0002780!2.86e-49!41;UBERON:0001890!2.86e-49!41;UBERON:0006240!2.86e-49!41;UBERON:0002791!6.89e-49!33;UBERON:0003080!7.62e-48!42;UBERON:0001869!2.15e-47!32;UBERON:0003056!9.99e-44!61;UBERON:0000033!1.38e-39!123;UBERON:0000153!2.55e-38!129;UBERON:0007811!2.55e-38!129;UBERON:0004121!2.21e-35!169;UBERON:0000956!2.30e-35!25;UBERON:0000203!2.30e-35!25;UBERON:0000924!4.10e-34!173;UBERON:0006601!4.10e-34!173;UBERON:0007023!1.07e-30!115;UBERON:0002619!1.98e-30!22;UBERON:0001950!7.26e-27!20;UBERON:0003076!1.77e-20!15;UBERON:0003057!1.77e-20!15;UBERON:0002308!4.91e-17!9;UBERON:0000125!4.91e-17!9;UBERON:0002420!7.01e-17!9;UBERON:0007245!7.01e-17!9;UBERON:0010009!7.01e-17!9;UBERON:0010011!7.01e-17!9;UBERON:0000454!7.01e-17!9;UBERON:0004733!1.50e-15!12;UBERON:0002028!1.50e-15!12;UBERON:0007277!1.50e-15!12;UBERON:0004732!3.78e-14!13;UBERON:0000025!5.37e-14!194;UBERON:0009663!2.38e-13!7;UBERON:0000064!3.44e-12!219;UBERON:0002298!7.15e-12!8;UBERON:0000200!1.02e-11!6;UBERON:0000119!2.72e-11!312;UBERON:0000483!4.81e-11!309;UBERON:0000349!1.09e-10!5;UBERON:0002680!2.09e-10!9;UBERON:0001895!2.09e-10!9;UBERON:0010092!2.09e-10!9;UBERON:0002021!9.73e-10!5;UBERON:0000062!4.10e-09!511;UBERON:0004111!4.26e-09!241;UBERON:0000475!4.46e-09!365;UBERON:0000369!7.14e-09!4;UBERON:0002435!7.14e-09!4;UBERON:0000204!7.14e-09!4;UBERON:0010082!7.14e-09!4;UBERON:0001871!1.11e-08!7;UBERON:0000477!2.48e-08!286;UBERON:0000467!4.84e-08!625;UBERON:0000480!5.47e-08!626;UBERON:0000922!2.24e-07!612;UBERON:0000923!2.65e-07!604;UBERON:0005291!2.65e-07!604;UBERON:0006598!2.65e-07!604;UBERON:0002532!2.65e-07!604;UBERON:0000468!2.96e-07!659;UBERON:0002050!2.98e-07!605;UBERON:0005423!2.98e-07!605;UBERON:0001896!4.42e-07!3;UBERON:0005290!4.42e-07!3;UBERON:0010096!4.42e-07!3;UBERON:0005383!5.17e-07!3;UBERON:0005382!5.17e-07!3;UBERON:0000988!6.92e-07!3;UBERON:0006331!8.23e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.01e-74;34!UBERON:0003528;1.20e-72;34!UBERON:0002020;1.20e-72;34!UBERON:0001869;3.14e-71;32!UBERON:0002791;4.36e-71;32!UBERON:0000073;2.51e-59;53!UBERON:0002616;2.51e-59;53!UBERON:0002780;6.34e-59;41!UBERON:0001890;6.34e-59;41!UBERON:0000956;1.39e-57;25!UBERON:0000203;1.39e-57;25!UBERON:0002619;7.47e-49;22!UBERON:0001950;1.65e-42;20!UBERON:0001017;5.96e-40;75!UBERON:0000955;3.89e-39;68!UBERON:0001016;8.41e-35;83!UBERON:0000125;8.18e-29;9!UBERON:0002308;8.18e-29;9!UBERON:0002420;1.28e-28;9!UBERON:0007245;1.28e-28;9!UBERON:0010009;1.28e-28;9!UBERON:0010011;1.28e-28;9!UBERON:0000454;1.28e-28;9!UBERON:0004733;1.62e-22;12!UBERON:0002028;1.62e-22;12!UBERON:0009663;2.42e-22;7!UBERON:0004732;1.21e-20;13!UBERON:0002298;2.17e-20;6!UBERON:0000200;1.28e-19;6!UBERON:0000349;1.04e-17;5!UBERON:0007023;7.05e-15;114!UBERON:0000369;2.31e-14;4!UBERON:0002435;2.31e-14;4!UBERON:0000204;2.31e-14;4!UBERON:0002680;8.02e-14;9!UBERON:0001895;8.02e-14;9!UBERON:0011216;5.46e-13;132!UBERON:0001871;3.34e-12;6!UBERON:0001896;2.92e-11;3!UBERON:0005290;2.92e-11;3!UBERON:0005383;3.35e-11;3!UBERON:0005382;3.35e-11;3!UBERON:0001870;4.25e-11;3!UBERON:0002021;7.14e-11;5!UBERON:0000988;7.32e-11;3!UBERON:0001872;1.08e-10;5!UBERON:0002240;1.92e-10;3!UBERON:0005174;1.92e-10;3!UBERON:0001137;1.92e-10;3!UBERON:0001954;2.93e-08;2!UBERON:0003022;2.93e-08;2!UBERON:0002421;2.93e-08;2!UBERON:0002600;2.93e-08;2!UBERON:0002148;3.43e-08;2!UBERON:0006331;3.43e-08;2!UBERON:0009662;3.43e-08;2!UBERON:0001873;5.03e-08;2!UBERON:0001876;5.49e-08;2!UBERON:0002771;9.33e-08;2!UBERON:0001897;9.33e-08;2!UBERON:0002702;9.33e-08;2!UBERON:0010225;9.33e-08;2!UBERON:0010314;1.62e-07;132!UBERON:0001875;4.85e-07;2!UBERON:0006514;4.85e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.39e-116,56;UBERON:0005068,8.39e-116,56;UBERON:0006241,8.39e-116,56;UBERON:0007135,8.39e-116,56;UBERON:0001017,4.27e-108,81;UBERON:0000073,1.52e-106,53;UBERON:0002616,1.52e-106,53;UBERON:0001016,2.26e-96,89;UBERON:0000955,6.81e-92,68;UBERON:0006238,6.81e-92,68;UBERON:0003528,3.11e-85,34;UBERON:0002020,3.11e-85,34;UBERON:0001893,2.17e-84,34;UBERON:0002780,8.51e-84,41;UBERON:0001890,8.51e-84,41;UBERON:0003080,8.51e-84,41;UBERON:0006240,8.51e-84,41;UBERON:0001869,8.56e-79,32;UBERON:0002791,1.42e-78,32;UBERON:0003075,4.43e-76,82;UBERON:0007284,4.43e-76,82;UBERON:0002346,4.47e-72,86;UBERON:0010371,7.90e-58,104;UBERON:0000956,1.49e-57,25;UBERON:0000203,1.49e-57,25;UBERON:0003056,6.85e-54,61;UBERON:0002619,7.25e-49,22;UBERON:0007023,9.48e-48,114;UBERON:0010314,1.26e-45,132;UBERON:0004121,2.25e-45,171;UBERON:0000924,2.25e-45,171;UBERON:0006601,2.25e-45,171;UBERON:0001950,1.28e-42,20;UBERON:0011216,4.13e-35,223;UBERON:0003076,3.41e-31,15;UBERON:0003057,3.41e-31,15;UBERON:0000125,6.63e-29,9;UBERON:0002308,6.63e-29,9;UBERON:0002420,1.25e-28,9;UBERON:0007245,1.25e-28,9;UBERON:0010009,1.25e-28,9;UBERON:0010011,1.25e-28,9;UBERON:0000454,1.25e-28,9;UBERON:0000025,7.47e-28,192;UBERON:0004733,1.22e-22,12;UBERON:0002028,1.22e-22,12;UBERON:0007277,1.22e-22,12;UBERON:0009663,2.24e-22,7;UBERON:0004732,9.30e-21,13;UBERON:0002298,1.50e-20,6;UBERON:0004111,4.29e-20,240;UBERON:0000200,1.73e-19,6;UBERON:0000349,1.13e-17,5;UBERON:0000369,1.82e-14,4;UBERON:0002435,1.82e-14,4;UBERON:0000204,1.82e-14,4;UBERON:0010082,1.82e-14,4;UBERON:0000483,2.92e-14,306;UBERON:0000119,5.14e-14,309;UBERON:0002680,6.72e-14,9;UBERON:0001895,6.72e-14,9;UBERON:0010092,6.72e-14,9;UBERON:0001871,4.76e-12,6;UBERON:0001896,2.59e-11,3;UBERON:0005290,2.59e-11,3;UBERON:0010096,2.59e-11,3;UBERON:0005383,3.41e-11,3;UBERON:0005382,3.41e-11,3;UBERON:0001870,4.80e-11,3;UBERON:0000988,5.69e-11,3;UBERON:0002021,5.95e-11,5;UBERON:0001872,6.27e-11,5;UBERON:0002240,1.32e-10,3;UBERON:0005174,1.32e-10,3;UBERON:0001137,1.32e-10,3;UBERON:0000923,1.26e-08,560;UBERON:0010316,1.26e-08,560;UBERON:0005291,1.26e-08,560;UBERON:0006598,1.26e-08,560;UBERON:0010317,1.26e-08,560;UBERON:0002532,1.26e-08,560;UBERON:0002050,1.78e-08,564;UBERON:0002148,2.99e-08,2;UBERON:0006331,2.99e-08,2;UBERON:0009662,2.99e-08,2;UBERON:0001954,3.95e-08,2;UBERON:0003022,3.95e-08,2;UBERON:0002421,3.95e-08,2;UBERON:0002600,3.95e-08,2;UBERON:0000922,4.22e-08,592;UBERON:0001876,5.79e-08,2;UBERON:0001873,6.20e-08,2;UBERON:0010122,6.20e-08,2;UBERON:0005423,7.40e-08,581;UBERON:0002702,1.03e-07,2;UBERON:0002771,1.18e-07,2;UBERON:0001897,1.31e-07,2;UBERON:0010225,1.31e-07,2;UBERON:0001875,4.70e-07,2;UBERON:0006514,4.70e-07,2 | |||
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| ||
|short_description=p2@SLC1A3 | |||
}} | }} |
Latest revision as of 19:21, 17 September 2015
Short description: | p2@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC1A3_5end |
Coexpression cluster: | C1961_Neural_cerebellum_medulla_mesothelioma_hippocampus_spinal_Astrocyte |
Association with transcript: | 38bp_to_ENST00000513646_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | E7EUV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.16e-10 | 3 |
adult endothelial progenitor cell | 2.63e-10 | 3 |
neuronal stem cell | 4.21e-07 | 8 |