FFCP PHASE1:Hg19::chr5:87980761..87980821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |HGNC=42810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000511014_5end | |association_with_transcript=-8bp_to_ENST00000511014_5end | ||
|cluster_id=chr5:87980761..87980821,- | |||
|coexpression_cluster_id=C755 | |coexpression_cluster_id=C755 | ||
|description=CAGE_peak_4_at_LINC00461_5end | |description=CAGE_peak_4_at_LINC00461_5end | ||
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|ontology_enrichment_celltype=CL:0002319!2.62e-15!25;CL:0000128!3.81e-12!7;CL:0000126!3.81e-12!7;CL:0000127!3.81e-12!7;CL:0002453!3.81e-12!7;CL:0000047!5.50e-10!8;CL:0002605!4.39e-08!3;CL:0000095!5.79e-08!17;CL:0000123!5.79e-08!17;CL:0002603!6.32e-08!3;CL:0000243!3.43e-07!15;CL:0000125!3.43e-07!15;CL:0000030!3.43e-07!15;CL:0000339!3.43e-07!15 | |ontology_enrichment_celltype=CL:0002319!2.62e-15!25;CL:0000128!3.81e-12!7;CL:0000126!3.81e-12!7;CL:0000127!3.81e-12!7;CL:0002453!3.81e-12!7;CL:0000047!5.50e-10!8;CL:0002605!4.39e-08!3;CL:0000095!5.79e-08!17;CL:0000123!5.79e-08!17;CL:0002603!6.32e-08!3;CL:0000243!3.43e-07!15;CL:0000125!3.43e-07!15;CL:0000030!3.43e-07!15;CL:0000339!3.43e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.38e-15;7!CL:0000126;1.38e-15;7!CL:0000127;1.38e-15;7!CL:0002319;8.89e-14;25!CL:0002605;3.74e-10;3!CL:0002603;7.00e-10;3!CL:0000047;3.60e-07;2!CL:0000095;6.18e-07;17 | |ontology_enrichment_celltype_v019=CL:0000128;1.38e-15;7!CL:0000126;1.38e-15;7!CL:0000127;1.38e-15;7!CL:0002319;8.89e-14;25!CL:0002605;3.74e-10;3!CL:0002603;7.00e-10;3!CL:0000047;3.60e-07;2!CL:0000095;6.18e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.31e-15,7;CL:0000126,1.31e-15,7;CL:0000127,1.31e-15,7;CL:0002453,1.31e-15,7;CL:0002319,8.79e-14,25;CL:0002605,3.91e-10,3;CL:0002603,6.31e-10,3;CL:0000047,1.38e-09,8;CL:0000095,5.95e-07,17;CL:0000123,5.95e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.70e-19;82!UBERON:0006215;1.31e-10;3!UBERON:0006241;5.18e-09;3!UBERON:0003057;5.18e-09;3 | |ontology_enrichment_development_v019=UBERON:0006601;1.70e-19;82!UBERON:0006215;1.31e-10;3!UBERON:0006241;5.18e-09;3!UBERON:0003057;5.18e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-104!82;UBERON:0005743!3.02e-102!86;UBERON:0001049!6.09e-97!57;UBERON:0005068!6.09e-97!57;UBERON:0006241!6.09e-97!57;UBERON:0007135!6.09e-97!57;UBERON:0000073!1.16e-96!94;UBERON:0001016!1.16e-96!94;UBERON:0002616!7.83e-89!59;UBERON:0000955!1.57e-85!69;UBERON:0006238!1.57e-85!69;UBERON:0002346!8.44e-71!90;UBERON:0003075!2.55e-69!86;UBERON:0007284!2.55e-69!86;UBERON:0002780!4.80e-68!41;UBERON:0001890!4.80e-68!41;UBERON:0006240!4.80e-68!41;UBERON:0001893!7.92e-67!34;UBERON:0002020!1.57e-66!34;UBERON:0003528!1.57e-66!34;UBERON:0003080!3.54e-66!42;UBERON:0002791!8.10e-65!33;UBERON:0001869!3.21e-63!32;UBERON:0000924!4.91e-58!173;UBERON:0006601!4.91e-58!173;UBERON:0004121!3.89e-56!169;UBERON:0000033!1.63e-50!123;UBERON:0000956!5.52e-50!25;UBERON:0000203!5.52e-50!25;UBERON:0000153!2.12e-47!129;UBERON:0007811!2.12e-47!129;UBERON:0003056!4.21e-47!61;UBERON:0002619!1.84e-43!22;UBERON:0001950!1.17e-39!20;UBERON:0007023!6.14e-39!115;UBERON:0003076!1.31e-30!15;UBERON:0003057!1.31e-30!15;UBERON:0004732!1.15e-26!13;UBERON:0004733!5.30e-25!12;UBERON:0002028!5.30e-25!12;UBERON:0007277!5.30e-25!12;UBERON:0000025!9.86e-21!194;UBERON:0002680!1.01e-19!9;UBERON:0001895!1.01e-19!9;UBERON:0010092!1.01e-19!9;UBERON:0002420!5.81e-18!9;UBERON:0007245!5.81e-18!9;UBERON:0010009!5.81e-18!9;UBERON:0010011!5.81e-18!9;UBERON:0000454!5.81e-18!9;UBERON:0002308!1.44e-17!9;UBERON:0000125!1.44e-17!9;UBERON:0002037!1.09e-14!6;UBERON:0006215!1.09e-14!6;UBERON:0004111!1.54e-14!241;UBERON:0009663!3.52e-14!7;UBERON:0001871!1.58e-13!7;UBERON:0000200!1.58e-13!6;UBERON:0000064!3.87e-13!219;UBERON:0000477!1.55e-12!286;UBERON:0000475!4.51e-12!365;UBERON:0002021!4.60e-12!5;UBERON:0002298!6.99e-12!8;UBERON:0000483!1.02e-11!309;UBERON:0001872!1.33e-11!5;UBERON:0000119!1.87e-11!312;UBERON:0000349!4.55e-11!5;UBERON:0000922!5.63e-10!612;UBERON:0000369!4.40e-09!4;UBERON:0002435!4.40e-09!4;UBERON:0000204!4.40e-09!4;UBERON:0010082!4.40e-09!4;UBERON:0000923!1.02e-08!604;UBERON:0005291!1.02e-08!604;UBERON:0006598!1.02e-08!604;UBERON:0002532!1.02e-08!604;UBERON:0002050!1.15e-08!605;UBERON:0005423!1.15e-08!605;UBERON:0000468!3.24e-08!659;UBERON:0002771!7.57e-08!3;UBERON:0000467!1.21e-07!625;UBERON:0000062!1.26e-07!511;UBERON:0000480!1.35e-07!626;UBERON:0002240!3.02e-07!3;UBERON:0005383!3.36e-07!3;UBERON:0005382!3.36e-07!3;UBERON:0001896!5.95e-07!3;UBERON:0005290!5.95e-07!3;UBERON:0010096!5.95e-07!3;UBERON:0000988!9.20e-07!3;UBERON:0006331!9.99e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!1.05e-104!82;UBERON:0005743!3.02e-102!86;UBERON:0001049!6.09e-97!57;UBERON:0005068!6.09e-97!57;UBERON:0006241!6.09e-97!57;UBERON:0007135!6.09e-97!57;UBERON:0000073!1.16e-96!94;UBERON:0001016!1.16e-96!94;UBERON:0002616!7.83e-89!59;UBERON:0000955!1.57e-85!69;UBERON:0006238!1.57e-85!69;UBERON:0002346!8.44e-71!90;UBERON:0003075!2.55e-69!86;UBERON:0007284!2.55e-69!86;UBERON:0002780!4.80e-68!41;UBERON:0001890!4.80e-68!41;UBERON:0006240!4.80e-68!41;UBERON:0001893!7.92e-67!34;UBERON:0002020!1.57e-66!34;UBERON:0003528!1.57e-66!34;UBERON:0003080!3.54e-66!42;UBERON:0002791!8.10e-65!33;UBERON:0001869!3.21e-63!32;UBERON:0000924!4.91e-58!173;UBERON:0006601!4.91e-58!173;UBERON:0004121!3.89e-56!169;UBERON:0000033!1.63e-50!123;UBERON:0000956!5.52e-50!25;UBERON:0000203!5.52e-50!25;UBERON:0000153!2.12e-47!129;UBERON:0007811!2.12e-47!129;UBERON:0003056!4.21e-47!61;UBERON:0002619!1.84e-43!22;UBERON:0001950!1.17e-39!20;UBERON:0007023!6.14e-39!115;UBERON:0003076!1.31e-30!15;UBERON:0003057!1.31e-30!15;UBERON:0004732!1.15e-26!13;UBERON:0004733!5.30e-25!12;UBERON:0002028!5.30e-25!12;UBERON:0007277!5.30e-25!12;UBERON:0000025!9.86e-21!194;UBERON:0002680!1.01e-19!9;UBERON:0001895!1.01e-19!9;UBERON:0010092!1.01e-19!9;UBERON:0002420!5.81e-18!9;UBERON:0007245!5.81e-18!9;UBERON:0010009!5.81e-18!9;UBERON:0010011!5.81e-18!9;UBERON:0000454!5.81e-18!9;UBERON:0002308!1.44e-17!9;UBERON:0000125!1.44e-17!9;UBERON:0002037!1.09e-14!6;UBERON:0006215!1.09e-14!6;UBERON:0004111!1.54e-14!241;UBERON:0009663!3.52e-14!7;UBERON:0001871!1.58e-13!7;UBERON:0000200!1.58e-13!6;UBERON:0000064!3.87e-13!219;UBERON:0000477!1.55e-12!286;UBERON:0000475!4.51e-12!365;UBERON:0002021!4.60e-12!5;UBERON:0002298!6.99e-12!8;UBERON:0000483!1.02e-11!309;UBERON:0001872!1.33e-11!5;UBERON:0000119!1.87e-11!312;UBERON:0000349!4.55e-11!5;UBERON:0000922!5.63e-10!612;UBERON:0000369!4.40e-09!4;UBERON:0002435!4.40e-09!4;UBERON:0000204!4.40e-09!4;UBERON:0010082!4.40e-09!4;UBERON:0000923!1.02e-08!604;UBERON:0005291!1.02e-08!604;UBERON:0006598!1.02e-08!604;UBERON:0002532!1.02e-08!604;UBERON:0002050!1.15e-08!605;UBERON:0005423!1.15e-08!605;UBERON:0000468!3.24e-08!659;UBERON:0002771!7.57e-08!3;UBERON:0000467!1.21e-07!625;UBERON:0000062!1.26e-07!511;UBERON:0000480!1.35e-07!626;UBERON:0002240!3.02e-07!3;UBERON:0005383!3.36e-07!3;UBERON:0005382!3.36e-07!3;UBERON:0001896!5.95e-07!3;UBERON:0005290!5.95e-07!3;UBERON:0010096!5.95e-07!3;UBERON:0000988!9.20e-07!3;UBERON:0006331!9.99e-07!3 | ||
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| ||
|short_description=p4@LINC00461 | |short_description=p4@LINC00461 | ||
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Latest revision as of 03:20, 19 September 2015
Short description: | p4@LINC00461 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LINC00461_5end |
Coexpression cluster: | C755_cerebellum_parietal_temporal_occipital_duodenum_brain_hippocampus |
Association with transcript: | -8bp_to_ENST00000511014_5end |
EntrezGene: | NA |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.31e-15 | 7 |
macroglial cell | 1.31e-15 | 7 |
astrocyte | 1.31e-15 | 7 |
oligodendrocyte precursor cell | 1.31e-15 | 7 |
neural cell | 8.79e-14 | 25 |
astrocyte of the cerebral cortex | 3.91e-10 | 3 |
astrocyte of the cerebellum | 6.31e-10 | 3 |
neuronal stem cell | 1.38e-09 | 8 |
neuron associated cell | 5.95e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.95e-07 | 17 |