FFCP PHASE1:Hg19::chr17:42984061..42984071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-190bp_to_U92979_5end | |association_with_transcript=-190bp_to_U92979_5end | ||
|cluster_id=chr17:42984061..42984071,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_29_at_GFAP_5end | |description=CAGE_peak_29_at_GFAP_5end | ||
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|ontology_enrichment_celltype=CL:0000128!3.01e-12!7;CL:0000126!3.01e-12!7;CL:0000127!3.01e-12!7;CL:0002453!3.01e-12!7;CL:0002605!1.90e-11!3 | |ontology_enrichment_celltype=CL:0000128!3.01e-12!7;CL:0000126!3.01e-12!7;CL:0000127!3.01e-12!7;CL:0002453!3.01e-12!7;CL:0002605!1.90e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;5.94e-10;3 | |ontology_enrichment_celltype_v019=CL:0002605;5.94e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.94e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.85e-22;3!UBERON:0003057;1.85e-22;3!UBERON:0006601;3.28e-11;82!UBERON:0006222;1.51e-08;1!UBERON:0005425;2.25e-08;1 | |ontology_enrichment_development_v019=UBERON:0006241;1.85e-22;3!UBERON:0003057;1.85e-22;3!UBERON:0006601;3.28e-11;82!UBERON:0006222;1.51e-08;1!UBERON:0005425;2.25e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.69e-112!57;UBERON:0005068!5.69e-112!57;UBERON:0006241!5.69e-112!57;UBERON:0007135!5.69e-112!57;UBERON:0001017!1.58e-93!82;UBERON:0002616!5.40e-92!59;UBERON:0005743!8.62e-89!86;UBERON:0000955!1.15e-84!69;UBERON:0006238!1.15e-84!69;UBERON:0000073!2.43e-83!94;UBERON:0001016!2.43e-83!94;UBERON:0002780!9.46e-75!41;UBERON:0001890!9.46e-75!41;UBERON:0006240!9.46e-75!41;UBERON:0003075!1.16e-74!86;UBERON:0007284!1.16e-74!86;UBERON:0003080!7.96e-73!42;UBERON:0002346!6.33e-71!90;UBERON:0002020!1.59e-68!34;UBERON:0003528!1.59e-68!34;UBERON:0001893!5.82e-68!34;UBERON:0002791!4.86e-65!33;UBERON:0001869!2.75e-61!32;UBERON:0007023!1.38e-51!115;UBERON:0003056!4.73e-48!61;UBERON:0000033!3.22e-46!123;UBERON:0000956!7.86e-45!25;UBERON:0000203!7.86e-45!25;UBERON:0004121!3.28e-44!169;UBERON:0000153!1.25e-43!129;UBERON:0007811!1.25e-43!129;UBERON:0000924!5.89e-43!173;UBERON:0006601!5.89e-43!173;UBERON:0003076!3.11e-39!15;UBERON:0003057!3.11e-39!15;UBERON:0002619!7.70e-36!22;UBERON:0004732!4.71e-32!13;UBERON:0001950!8.19e-30!20;UBERON:0004733!1.18e-28!12;UBERON:0002028!1.18e-28!12;UBERON:0007277!1.18e-28!12;UBERON:0000025!4.40e-26!194;UBERON:0002308!2.24e-25!9;UBERON:0000125!2.24e-25!9;UBERON:0002420!3.73e-25!9;UBERON:0007245!3.73e-25!9;UBERON:0010009!3.73e-25!9;UBERON:0010011!3.73e-25!9;UBERON:0000454!3.73e-25!9;UBERON:0002298!1.23e-22!8;UBERON:0004111!3.32e-20!241;UBERON:0002680!1.56e-18!9;UBERON:0001895!1.56e-18!9;UBERON:0010092!1.56e-18!9;UBERON:0009663!1.64e-18!7;UBERON:0000349!2.18e-18!5;UBERON:0000477!1.75e-16!286;UBERON:0001871!5.36e-16!7;UBERON:0000200!9.23e-15!6;UBERON:0000483!2.32e-14!309;UBERON:0000119!4.01e-14!312;UBERON:0000064!1.70e-13!219;UBERON:0000475!4.52e-13!365;UBERON:0002240!1.19e-12!3;UBERON:0001896!1.95e-12!3;UBERON:0005290!1.95e-12!3;UBERON:0010096!1.95e-12!3;UBERON:0006331!2.35e-12!3;UBERON:0000988!9.55e-12!3;UBERON:0002771!1.14e-11!3;UBERON:0002037!1.94e-09!6;UBERON:0006215!1.94e-09!6;UBERON:0002148!9.57e-09!2;UBERON:0009662!9.57e-09!2;UBERON:0001894!1.23e-08!7;UBERON:0006222!1.23e-08!7;UBERON:0005162!1.34e-08!2;UBERON:0000122!1.34e-08!2;UBERON:0001875!1.34e-08!2;UBERON:0006514!1.34e-08!2;UBERON:0000369!1.52e-08!4;UBERON:0002435!1.52e-08!4;UBERON:0000204!1.52e-08!4;UBERON:0010082!1.52e-08!4;UBERON:0001954!1.61e-08!2;UBERON:0003022!1.61e-08!2;UBERON:0002421!1.61e-08!2;UBERON:0002600!1.61e-08!2;UBERON:0001876!1.74e-08!2;UBERON:0001897!1.80e-08!2;UBERON:0000062!5.23e-08!511;UBERON:0005174!9.89e-08!5;UBERON:0001137!9.89e-08!5;UBERON:0001872!7.52e-07!5;UBERON:0002021!7.68e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!5.69e-112!57;UBERON:0005068!5.69e-112!57;UBERON:0006241!5.69e-112!57;UBERON:0007135!5.69e-112!57;UBERON:0001017!1.58e-93!82;UBERON:0002616!5.40e-92!59;UBERON:0005743!8.62e-89!86;UBERON:0000955!1.15e-84!69;UBERON:0006238!1.15e-84!69;UBERON:0000073!2.43e-83!94;UBERON:0001016!2.43e-83!94;UBERON:0002780!9.46e-75!41;UBERON:0001890!9.46e-75!41;UBERON:0006240!9.46e-75!41;UBERON:0003075!1.16e-74!86;UBERON:0007284!1.16e-74!86;UBERON:0003080!7.96e-73!42;UBERON:0002346!6.33e-71!90;UBERON:0002020!1.59e-68!34;UBERON:0003528!1.59e-68!34;UBERON:0001893!5.82e-68!34;UBERON:0002791!4.86e-65!33;UBERON:0001869!2.75e-61!32;UBERON:0007023!1.38e-51!115;UBERON:0003056!4.73e-48!61;UBERON:0000033!3.22e-46!123;UBERON:0000956!7.86e-45!25;UBERON:0000203!7.86e-45!25;UBERON:0004121!3.28e-44!169;UBERON:0000153!1.25e-43!129;UBERON:0007811!1.25e-43!129;UBERON:0000924!5.89e-43!173;UBERON:0006601!5.89e-43!173;UBERON:0003076!3.11e-39!15;UBERON:0003057!3.11e-39!15;UBERON:0002619!7.70e-36!22;UBERON:0004732!4.71e-32!13;UBERON:0001950!8.19e-30!20;UBERON:0004733!1.18e-28!12;UBERON:0002028!1.18e-28!12;UBERON:0007277!1.18e-28!12;UBERON:0000025!4.40e-26!194;UBERON:0002308!2.24e-25!9;UBERON:0000125!2.24e-25!9;UBERON:0002420!3.73e-25!9;UBERON:0007245!3.73e-25!9;UBERON:0010009!3.73e-25!9;UBERON:0010011!3.73e-25!9;UBERON:0000454!3.73e-25!9;UBERON:0002298!1.23e-22!8;UBERON:0004111!3.32e-20!241;UBERON:0002680!1.56e-18!9;UBERON:0001895!1.56e-18!9;UBERON:0010092!1.56e-18!9;UBERON:0009663!1.64e-18!7;UBERON:0000349!2.18e-18!5;UBERON:0000477!1.75e-16!286;UBERON:0001871!5.36e-16!7;UBERON:0000200!9.23e-15!6;UBERON:0000483!2.32e-14!309;UBERON:0000119!4.01e-14!312;UBERON:0000064!1.70e-13!219;UBERON:0000475!4.52e-13!365;UBERON:0002240!1.19e-12!3;UBERON:0001896!1.95e-12!3;UBERON:0005290!1.95e-12!3;UBERON:0010096!1.95e-12!3;UBERON:0006331!2.35e-12!3;UBERON:0000988!9.55e-12!3;UBERON:0002771!1.14e-11!3;UBERON:0002037!1.94e-09!6;UBERON:0006215!1.94e-09!6;UBERON:0002148!9.57e-09!2;UBERON:0009662!9.57e-09!2;UBERON:0001894!1.23e-08!7;UBERON:0006222!1.23e-08!7;UBERON:0005162!1.34e-08!2;UBERON:0000122!1.34e-08!2;UBERON:0001875!1.34e-08!2;UBERON:0006514!1.34e-08!2;UBERON:0000369!1.52e-08!4;UBERON:0002435!1.52e-08!4;UBERON:0000204!1.52e-08!4;UBERON:0010082!1.52e-08!4;UBERON:0001954!1.61e-08!2;UBERON:0003022!1.61e-08!2;UBERON:0002421!1.61e-08!2;UBERON:0002600!1.61e-08!2;UBERON:0001876!1.74e-08!2;UBERON:0001897!1.80e-08!2;UBERON:0000062!5.23e-08!511;UBERON:0005174!9.89e-08!5;UBERON:0001137!9.89e-08!5;UBERON:0001872!7.52e-07!5;UBERON:0002021!7.68e-07!5 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|short_description=p29@GFAP | |short_description=p29@GFAP | ||
}} | }} |
Latest revision as of 23:16, 24 September 2015
Short description: | p29@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -190bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.94e-10 | 3 |