FFCP PHASE1:Hg19::chr6:30848771..30848818,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:30848771..30848818,+
|short_description=p7@DDR1
|description=CAGE_peak_7_at_DDR1_5end
|association_with_transcript=0bp_to_ENST00000503180_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=780 | |EntrezGene=780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2730 | |HGNC=2730 | ||
|TSSclassifier=strong | |||
|UniProt=D6RB35 | |UniProt=D6RB35 | ||
|association_with_transcript=0bp_to_ENST00000503180_5end | |||
|cluster_id=chr6:30848771..30848818,+ | |||
|coexpression_cluster_id=C808 | |||
|description=CAGE_peak_7_at_DDR1_5end | |||
|id=chr6:30848771..30848818,+ | |||
|ontology_enrichment_celltype=CL:0000047!5.64e-12!8;CL:0002319!5.16e-09!25;CL:0000540!5.90e-09!6;CL:0000031!5.90e-09!6;CL:0000404!5.90e-09!6;CL:0000133!8.10e-08!59;CL:0002322!2.65e-07!5;CL:0000128!3.11e-07!7;CL:0000126!3.11e-07!7;CL:0000127!3.11e-07!7;CL:0002453!3.11e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.89e-12;25!CL:0000540;4.04e-12;6!CL:0000404;4.04e-12;6!CL:0000128;1.69e-07;7!CL:0000126;1.69e-07;7!CL:0000127;1.69e-07;7!CL:0002605;2.14e-07;3!CL:0002322;8.66e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.38e-16,8;CL:0000540,3.14e-12,6;CL:0000031,3.14e-12,6;CL:0000404,3.14e-12,6;CL:0002319,4.01e-12,25;CL:0000133,2.69e-10,59;CL:0000221,1.53e-07,72;CL:0000128,1.98e-07,7;CL:0000126,1.98e-07,7;CL:0000127,1.98e-07,7;CL:0002453,1.98e-07,7;CL:0002605,2.09e-07,3;CL:0002322,8.33e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.33e-15;82!CL:0000031;4.04e-12;6!UBERON:0006241;4.50e-08;3!UBERON:0003057;4.50e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.17e-56;34!UBERON:0003528;1.49e-56;34!UBERON:0002020;1.49e-56;34!UBERON:0002791;1.49e-56;32!UBERON:0001869;3.05e-56;32!UBERON:0002780;1.62e-54;41!UBERON:0001890;1.62e-54;41!UBERON:0000073;3.98e-53;53!UBERON:0002616;3.98e-53;53!UBERON:0000956;1.37e-48;25!UBERON:0000203;1.37e-48;25!UBERON:0002619;1.01e-42;22!UBERON:0001950;5.80e-39;20!UBERON:0001017;1.06e-38;75!UBERON:0000955;8.75e-38;68!UBERON:0001016;4.25e-34;83!UBERON:0004732;1.36e-20;13!UBERON:0004733;7.32e-19;12!UBERON:0002028;7.32e-19;12!UBERON:0000125;1.23e-18;9!UBERON:0002308;1.23e-18;9!UBERON:0002420;2.28e-18;9!UBERON:0007245;2.28e-18;9!UBERON:0010009;2.28e-18;9!UBERON:0010011;2.28e-18;9!UBERON:0000454;2.28e-18;9!UBERON:0009663;7.28e-15;7!UBERON:0001871;4.52e-14;6!UBERON:0002298;3.33e-13;6!UBERON:0002680;6.02e-13;9!UBERON:0001895;6.02e-13;9!UBERON:0000200;7.62e-12;6!UBERON:0011216;8.49e-12;132!UBERON:0007023;1.15e-11;114!UBERON:0002021;5.01e-11;5!UBERON:0001894;9.62e-11;7!UBERON:0000349;1.29e-10;5!UBERON:0001872;2.75e-10;5!UBERON:0000369;6.80e-09;4!UBERON:0002435;6.80e-09;4!UBERON:0000204;6.80e-09;4!UBERON:0010314;3.47e-08;132!UBERON:0002240;4.50e-08;3!UBERON:0005174;4.50e-08;3!UBERON:0001137;4.50e-08;3!UBERON:0001896;8.53e-08;3!UBERON:0005290;8.53e-08;3!UBERON:0002037;9.74e-08;6!UBERON:0005383;3.84e-07;3!UBERON:0005382;3.84e-07;3!UBERON:0000988;4.45e-07;3!UBERON:0001870;8.53e-07;3 | |||
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| ||
|short_description=p7@DDR1 | |||
}} | }} |
Latest revision as of 19:05, 17 September 2015
Short description: | p7@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DDR1_5end |
Coexpression cluster: | C808_Neural_spinal_cerebral_hippocampus_cerebellum_duodenum_corpus |
Association with transcript: | 0bp_to_ENST00000503180_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | D6RB35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.38e-16 | 8 |
neuron | 3.14e-12 | 6 |
neuroblast | 3.14e-12 | 6 |
electrically signaling cell | 3.14e-12 | 6 |
neural cell | 4.01e-12 | 25 |
neurectodermal cell | 2.69e-10 | 59 |
ectodermal cell | 1.53e-07 | 72 |
oligodendrocyte | 1.98e-07 | 7 |
macroglial cell | 1.98e-07 | 7 |
astrocyte | 1.98e-07 | 7 |
oligodendrocyte precursor cell | 1.98e-07 | 7 |
astrocyte of the cerebral cortex | 2.09e-07 | 3 |
embryonic stem cell | 8.33e-07 | 5 |