FFCP PHASE1:Hg19::chr5:139175380..139175431,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:139175380..139175431,+ to FFCP PHASE1:Hg19::chr5:139175380..139175431,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84249 | |EntrezGene=84249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19092 | |HGNC=19092 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQI7 | |UniProt=Q9BQI7 | ||
|association_with_transcript=0bp_to_ENST00000274710,NM_032289,uc003leu.1_5end | |||
|cluster_id=chr5:139175380..139175431,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_PSD2_5end | |||
|id=chr5:139175380..139175431,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.14e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-22;82!UBERON:0006241;6.09e-10;3!UBERON:0003057;6.09e-10;3!UBERON:0006215;1.14e-09;3!UBERON:0010122;7.80e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-66!57;UBERON:0005068!1.13e-66!57;UBERON:0006241!1.13e-66!57;UBERON:0007135!1.13e-66!57;UBERON:0001017!3.35e-64!82;UBERON:0000073!9.05e-63!94;UBERON:0001016!9.05e-63!94;UBERON:0005743!1.77e-62!86;UBERON:0002616!3.65e-55!59;UBERON:0000955!5.04e-53!69;UBERON:0006238!5.04e-53!69;UBERON:0007023!1.68e-51!115;UBERON:0003080!3.08e-51!42;UBERON:0002780!5.74e-50!41;UBERON:0001890!5.74e-50!41;UBERON:0006240!5.74e-50!41;UBERON:0002020!2.12e-45!34;UBERON:0003528!2.12e-45!34;UBERON:0001893!3.56e-45!34;UBERON:0003075!4.05e-44!86;UBERON:0007284!4.05e-44!86;UBERON:0002791!1.28e-43!33;UBERON:0001869!5.02e-42!32;UBERON:0002346!2.24e-41!90;UBERON:0004121!1.82e-37!169;UBERON:0000924!4.42e-36!173;UBERON:0006601!4.42e-36!173;UBERON:0002619!3.06e-33!22;UBERON:0003056!3.38e-33!61;UBERON:0000956!3.29e-31!25;UBERON:0000203!3.29e-31!25;UBERON:0000033!4.26e-30!123;UBERON:0001950!4.85e-30!20;UBERON:0000153!3.99e-29!129;UBERON:0007811!3.99e-29!129;UBERON:0003076!6.72e-16!15;UBERON:0003057!6.72e-16!15;UBERON:0002308!1.21e-15!9;UBERON:0000125!1.21e-15!9;UBERON:0002420!2.74e-15!9;UBERON:0007245!2.74e-15!9;UBERON:0010009!2.74e-15!9;UBERON:0010011!2.74e-15!9;UBERON:0000454!2.74e-15!9;UBERON:0000025!2.50e-14!194;UBERON:0002298!3.77e-14!8;UBERON:0004732!8.56e-13!13;UBERON:0009663!2.87e-12!7;UBERON:0000064!8.15e-12!219;UBERON:0004733!1.89e-11!12;UBERON:0002028!1.89e-11!12;UBERON:0007277!1.89e-11!12;UBERON:0004111!3.16e-11!241;UBERON:0000200!1.10e-10!6;UBERON:0001871!1.64e-10!7;UBERON:0000475!1.67e-10!365;UBERON:0002021!1.89e-09!5;UBERON:0000349!2.52e-09!5;UBERON:0001872!3.83e-09!5;UBERON:0000477!6.94e-08!286;UBERON:0000369!1.35e-07!4;UBERON:0002435!1.35e-07!4;UBERON:0000204!1.35e-07!4;UBERON:0010082!1.35e-07!4;UBERON:0000062!3.58e-07!511;UBERON:0002680!4.50e-07!9;UBERON:0001895!4.50e-07!9;UBERON:0010092!4.50e-07!9;UBERON:0000483!7.77e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.72e-62;34!UBERON:0003528;3.11e-62;34!UBERON:0002020;3.11e-62;34!UBERON:0001869;6.71e-61;32!UBERON:0002791;7.49e-61;32!UBERON:0002780;6.40e-59;41!UBERON:0001890;6.40e-59;41!UBERON:0002619;4.22e-57;22!UBERON:0000073;5.98e-57;53!UBERON:0002616;5.98e-57;53!UBERON:0001950;1.62e-51;20!UBERON:0000956;8.75e-50;25!UBERON:0000203;8.75e-50;25!UBERON:0001017;2.04e-40;75!UBERON:0000955;1.73e-39;68!UBERON:0001016;1.46e-34;83!UBERON:0000125;5.13e-26;9!UBERON:0002308;5.13e-26;9!UBERON:0002420;2.17e-25;9!UBERON:0007245;2.17e-25;9!UBERON:0010009;2.17e-25;9!UBERON:0010011;2.17e-25;9!UBERON:0000454;2.17e-25;9!UBERON:0004732;5.38e-22;13!UBERON:0009663;3.87e-20;7!UBERON:0004733;1.21e-19;12!UBERON:0002028;1.21e-19;12!UBERON:0002298;6.85e-19;6!UBERON:0000200;2.21e-17;6!UBERON:0007023;1.03e-16;114!UBERON:0002021;2.99e-15;5!UBERON:0000349;5.37e-15;5!UBERON:0001871;8.14e-15;6!UBERON:0001872;9.89e-15;5!UBERON:0011216;1.55e-14;132!UBERON:0002784;4.14e-12;4!UBERON:0000369;4.92e-12;4!UBERON:0002435;4.92e-12;4!UBERON:0000204;4.92e-12;4!UBERON:0002680;6.14e-12;9!UBERON:0001895;6.14e-12;9!UBERON:0001894;1.17e-10;7!UBERON:0000988;2.35e-10;3!UBERON:0001896;2.96e-10;3!UBERON:0005290;2.96e-10;3!UBERON:0002240;6.09e-10;3!UBERON:0005174;6.09e-10;3!UBERON:0001137;6.09e-10;3!UBERON:0005383;1.76e-09;3!UBERON:0005382;1.76e-09;3!UBERON:0001870;3.00e-09;3!UBERON:0010314;7.06e-09;132!UBERON:0002148;1.37e-07;2!UBERON:0006331;1.37e-07;2!UBERON:0009662;1.37e-07;2!UBERON:0001897;1.41e-07;2!UBERON:0010225;1.41e-07;2!UBERON:0001875;2.66e-07;2!UBERON:0006514;2.66e-07;2!UBERON:0001954;3.55e-07;2!UBERON:0003022;3.55e-07;2!UBERON:0002421;3.55e-07;2!UBERON:0002600;3.55e-07;2!UBERON:0005162;6.08e-07;2!UBERON:0000122;6.08e-07;2!UBERON:0001876;6.17e-07;2!UBERON:0002771;6.45e-07;2!UBERON:0001873;7.80e-07;2!UBERON:0002702;8.90e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.09e-111,56;UBERON:0005068,3.09e-111,56;UBERON:0006241,3.09e-111,56;UBERON:0007135,3.09e-111,56;UBERON:0001017,1.19e-104,81;UBERON:0000073,1.28e-102,53;UBERON:0002616,1.28e-102,53;UBERON:0001016,3.83e-100,89;UBERON:0000955,5.43e-88,68;UBERON:0006238,5.43e-88,68;UBERON:0002780,3.13e-83,41;UBERON:0001890,3.13e-83,41;UBERON:0003080,3.13e-83,41;UBERON:0006240,3.13e-83,41;UBERON:0003075,9.96e-76,82;UBERON:0007284,9.96e-76,82;UBERON:0003528,2.02e-74,34;UBERON:0002020,2.02e-74,34;UBERON:0001893,4.90e-74,34;UBERON:0002346,1.17e-71,86;UBERON:0001869,1.46e-68,32;UBERON:0002791,1.83e-68,32;UBERON:0010371,3.46e-57,104;UBERON:0002619,3.99e-57,22;UBERON:0007023,1.69e-56,114;UBERON:0003056,2.51e-56,61;UBERON:0001950,1.58e-51,20;UBERON:0004121,4.82e-50,171;UBERON:0000924,4.82e-50,171;UBERON:0006601,4.82e-50,171;UBERON:0000956,8.34e-50,25;UBERON:0000203,8.34e-50,25;UBERON:0010314,1.25e-46,132;UBERON:0011216,1.22e-39,223;UBERON:0003076,2.03e-27,15;UBERON:0003057,2.03e-27,15;UBERON:0000025,1.45e-26,192;UBERON:0000125,5.06e-26,9;UBERON:0002308,5.06e-26,9;UBERON:0002420,2.11e-25,9;UBERON:0007245,2.11e-25,9;UBERON:0010009,2.11e-25,9;UBERON:0010011,2.11e-25,9;UBERON:0000454,2.11e-25,9;UBERON:0004732,5.76e-22,13;UBERON:0004111,7.81e-21,240;UBERON:0009663,3.81e-20,7;UBERON:0004733,1.31e-19,12;UBERON:0002028,1.31e-19,12;UBERON:0007277,1.31e-19,12;UBERON:0002298,6.95e-19,6;UBERON:0000200,2.15e-17,6;UBERON:0002021,2.99e-15,5;UBERON:0000349,4.92e-15,5;UBERON:0001871,8.34e-15,6;UBERON:0001872,1.02e-14,5;UBERON:0000483,7.08e-13,306;UBERON:0000119,1.24e-12,309;UBERON:0002784,4.08e-12,4;UBERON:0000369,4.85e-12,4;UBERON:0002435,4.85e-12,4;UBERON:0000204,4.85e-12,4;UBERON:0010082,4.85e-12,4;UBERON:0002680,6.57e-12,9;UBERON:0001895,6.57e-12,9;UBERON:0010092,6.57e-12,9;UBERON:0001894,1.15e-10,7;UBERON:0006222,1.15e-10,7;UBERON:0000988,2.39e-10,3;UBERON:0001896,2.96e-10,3;UBERON:0005290,2.96e-10,3;UBERON:0010096,2.96e-10,3;UBERON:0002240,6.28e-10,3;UBERON:0005174,6.28e-10,3;UBERON:0001137,6.28e-10,3;UBERON:0005383,1.81e-09,3;UBERON:0005382,1.81e-09,3;UBERON:0001870,2.79e-09,3;UBERON:0000923,6.68e-09,560;UBERON:0010316,6.68e-09,560;UBERON:0005291,6.68e-09,560;UBERON:0006598,6.68e-09,560;UBERON:0010317,6.68e-09,560;UBERON:0002532,6.68e-09,560;UBERON:0002050,9.86e-09,564;UBERON:0000922,3.47e-08,592;UBERON:0005423,4.87e-08,581;UBERON:0002148,1.37e-07,2;UBERON:0006331,1.37e-07,2;UBERON:0009662,1.37e-07,2;UBERON:0001897,1.41e-07,2;UBERON:0010225,1.41e-07,2;UBERON:0001875,2.70e-07,2;UBERON:0006514,2.70e-07,2;UBERON:0001954,3.44e-07,2;UBERON:0003022,3.44e-07,2;UBERON:0002421,3.44e-07,2;UBERON:0002600,3.44e-07,2;UBERON:0005162,5.90e-07,2;UBERON:0000122,5.90e-07,2;UBERON:0001876,6.08e-07,2;UBERON:0002771,6.64e-07,2;UBERON:0001873,7.92e-07,2;UBERON:0010122,7.92e-07,2;UBERON:0002702,8.65e-07,2 | |||
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| ||
|short_description=p1@PSD2 | |||
}} | }} |
Latest revision as of 01:06, 25 September 2015
Short description: | p1@PSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSD2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000274710, NM_032289, uc003leu.1_5end |
EntrezGene: | PSD2 |
HGNC: | 19092 |
UniProt: | Q9BQI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.14e-08 | 8 |