FFCP PHASE1:Hg19::chr17:42983579..42983617,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4|description=CAGE_peak_at_chr17:42983579..42983617,+|id=chr17:42983579..42983617,+|ontology_enrichment_celltype=CL:0000128!8.51e-13!7;CL:0000126!8.51e-13!7;CL:0000127!8.51e-13!7;CL:0002453!8.51e-13!7;CL:0002605!4.09e-12!3;CL:0002319!3.74e-09!25;CL:0000047!2.44e-07!8|ontology_enrichment_celltype_v019=CL:0002605;4.13e-17;3!CL:0000128;1.48e-12;7!CL:0000126;1.48e-12;7!CL:0000127;1.48e-12;7!CL:0002319;7.50e-09;25!CL:0000540;1.37e-08;6!CL:0000404;1.37e-08;6|ontology_enrichment_celltype_v019_2=CL:0002605,4.73e-17,3;CL:0000128,1.66e-12,7;CL:0000126,1.66e-12,7;CL:0000127,1.66e-12,7;CL:0002453,1.66e-12,7;CL:0002319,7.88e-09,25;CL:0000540,1.38e-08,6;CL:0000031,1.38e-08,6;CL:0000404,1.38e-08,6|ontology_enrichment_development_v019=UBERON:0006601;1.21e-14;82!CL:0000031;1.37e-08;6!UBERON:0006241;4.31e-08;3!UBERON:0003057;4.31e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.98e-113!57;UBERON:0005068!9.98e-113!57;UBERON:0006241!9.98e-113!57;UBERON:0007135!9.98e-113!57;UBERON:0001017!5.57e-107!82;UBERON:0005743!1.44e-105!86;UBERON:0000073!1.02e-94!94;UBERON:0001016!1.02e-94!94;UBERON:0002616!1.55e-93!59;UBERON:0000955!3.04e-90!69;UBERON:0006238!3.04e-90!69;UBERON:0003075!6.35e-82!86;UBERON:0007284!6.35e-82!86;UBERON:0002346!7.67e-78!90;UBERON:0002780!6.17e-77!41;UBERON:0001890!6.17e-77!41;UBERON:0006240!6.17e-77!41;UBERON:0002020!3.15e-76!34;UBERON:0003528!3.15e-76!34;UBERON:0001893!5.59e-76!34;UBERON:0003080!5.95e-75!42;UBERON:0002791!6.67e-73!33;UBERON:0001869!3.35e-69!32;UBERON:0003056!1.18e-52!61;UBERON:0000033!1.60e-51!123;UBERON:0007023!3.48e-51!115;UBERON:0004121!1.72e-50!169;UBERON:0000924!4.43e-49!173;UBERON:0006601!4.43e-49!173;UBERON:0000153!1.16e-48!129;UBERON:0007811!1.16e-48!129;UBERON:0000956!4.85e-48!25;UBERON:0000203!4.85e-48!25;UBERON:0002619!2.02e-38!22;UBERON:0003076!1.52e-37!15;UBERON:0003057!1.52e-37!15;UBERON:0001950!2.44e-32!20;UBERON:0002308!2.36e-30!9;UBERON:0000125!2.36e-30!9;UBERON:0002420!8.46e-30!9;UBERON:0007245!8.46e-30!9;UBERON:0010009!8.46e-30!9;UBERON:0010011!8.46e-30!9;UBERON:0000454!8.46e-30!9;UBERON:0004733!4.27e-28!12;UBERON:0002028!4.27e-28!12;UBERON:0007277!4.27e-28!12;UBERON:0000025!1.76e-27!194;UBERON:0004732!9.04e-26!13;UBERON:0009663!1.34e-23!7;UBERON:0002298!4.79e-22!8;UBERON:0004111!4.69e-20!241;UBERON:0002680!3.10e-18!9;UBERON:0001895!3.10e-18!9;UBERON:0010092!3.10e-18!9;UBERON:0000349!1.46e-17!5;UBERON:0000477!2.86e-16!286;UBERON:0000064!1.39e-15!219;UBERON:0000483!4.51e-15!309;UBERON:0000119!8.02e-15!312;UBERON:0001871!9.56e-15!7;UBERON:0000200!7.30e-14!6;UBERON:0000369!1.41e-13!4;UBERON:0002435!1.41e-13!4;UBERON:0000204!1.41e-13!4;UBERON:0010082!1.41e-13!4;UBERON:0000475!7.78e-13!365;UBERON:0001896!3.80e-12!3;UBERON:0005290!3.80e-12!3;UBERON:0010096!3.80e-12!3;UBERON:0006331!6.10e-12!3;UBERON:0000988!1.66e-11!3;UBERON:0002240!2.44e-11!3;UBERON:0001872!4.82e-11!5;UBERON:0005383!1.28e-10!3;UBERON:0005382!1.28e-10!3;UBERON:0002771!1.51e-10!3;UBERON:0002037!2.45e-09!6;UBERON:0006215!2.45e-09!6;UBERON:0002148!1.79e-08!2;UBERON:0009662!1.79e-08!2;UBERON:0001954!2.06e-08!2;UBERON:0003022!2.06e-08!2;UBERON:0002421!2.06e-08!2;UBERON:0002600!2.06e-08!2;UBERON:0001875!2.56e-08!2;UBERON:0006514!2.56e-08!2;UBERON:0001897!2.66e-08!2;UBERON:0001876!6.66e-08!2;UBERON:0001873!1.12e-07!2;UBERON:0010122!1.12e-07!2;UBERON:0000062!5.09e-07!511;UBERON:0005174!5.89e-07!5;UBERON:0001137!5.89e-07!5|ontology_enrichment_uberon_v019=UBERON:0000073;1.33e-45;53!UBERON:0002616;1.33e-45;53!UBERON:0002780;3.95e-43;41!UBERON:0001890;3.95e-43;41!UBERON:0001893;8.30e-43;34!UBERON:0003528;5.73e-41;34!UBERON:0002020;5.73e-41;34!UBERON:0001869;2.43e-39;32!UBERON:0002791;1.32e-37;32!UBERON:0000955;2.17e-33;68!UBERON:0002298;1.78e-31;6!UBERON:0000956;2.40e-30;25!UBERON:0000203;2.40e-30;25!UBERON:0004733;4.50e-27;12!UBERON:0002028;4.50e-27;12!UBERON:0001017;5.86e-26;75!UBERON:0004732;6.75e-25;13!UBERON:0001016;3.59e-22;83!UBERON:0000125;1.85e-20;9!UBERON:0002308;1.85e-20;9!UBERON:0002420;6.63e-20;9!UBERON:0007245;6.63e-20;9!UBERON:0010009;6.63e-20;9!UBERON:0010011;6.63e-20;9!UBERON:0000454;6.63e-20;9!UBERON:0002619;7.56e-20;22!UBERON:0001896;4.36e-17;3!UBERON:0005290;4.36e-17;3!UBERON:0000349;1.23e-16;5!UBERON:0000988;3.50e-16;3!UBERON:0002680;2.64e-14;9!UBERON:0001895;2.64e-14;9!UBERON:0001950;8.97e-14;20!UBERON:0009663;4.19e-12;7!UBERON:0001954;1.06e-11;2!UBERON:0003022;1.06e-11;2!UBERON:0002421;1.06e-11;2!UBERON:0002600;1.06e-11;2!UBERON:0002148;1.18e-11;2!UBERON:0006331;1.18e-11;2!UBERON:0009662;1.18e-11;2!UBERON:0001897;1.76e-11;2!UBERON:0001875;1.76e-11;2!UBERON:0006514;1.76e-11;2!UBERON:0010225;1.76e-11;2!UBERON:0001876;8.28e-11;2!UBERON:0001872;2.03e-09;5!UBERON:0007023;3.19e-09;114!UBERON:0011216;3.81e-09;132!UBERON: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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_at_chr17:42983579..42983617,+ | |||
|id=chr17:42983579..42983617,+ | |||
|ontology_enrichment_celltype=CL:0000128!8.51e-13!7;CL:0000126!8.51e-13!7;CL:0000127!8.51e-13!7;CL:0002453!8.51e-13!7;CL:0002605!4.09e-12!3;CL:0002319!3.74e-09!25;CL:0000047!2.44e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.13e-17;3!CL:0000128;1.48e-12;7!CL:0000126;1.48e-12;7!CL:0000127;1.48e-12;7!CL:0002319;7.50e-09;25!CL:0000540;1.37e-08;6!CL:0000404;1.37e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.73e-17,3;CL:0000128,1.66e-12,7;CL:0000126,1.66e-12,7;CL:0000127,1.66e-12,7;CL:0002453,1.66e-12,7;CL:0002319,7.88e-09,25;CL:0000540,1.38e-08,6;CL:0000031,1.38e-08,6;CL:0000404,1.38e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.21e-14;82!CL:0000031;1.37e-08;6!UBERON:0006241;4.31e-08;3!UBERON:0003057;4.31e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr17:42983579..42983617,+ | |||
}} |
Revision as of 13:57, 11 September 2013
Short description: | p@chr17:42983579..42983617, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:42983579..42983617, + |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.73e-17 | 3 |
oligodendrocyte | 1.66e-12 | 7 |
macroglial cell | 1.66e-12 | 7 |
astrocyte | 1.66e-12 | 7 |
oligodendrocyte precursor cell | 1.66e-12 | 7 |
neural cell | 7.88e-09 | 25 |
neuron | 1.38e-08 | 6 |
neuroblast | 1.38e-08 | 6 |
electrically signaling cell | 1.38e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.