FFCP PHASE1:Hg19::chr4:176733558..176733609,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2823|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4460|TSSclassifier=N|UniProt=D6RBH3|association_with_transcript=-143bp_to_ENST00000505375_5end|coexpression_cluster_id=C3066|description=CAGE_peak_7_at_GPM6A_5end|id=chr4:176733558..176733609,-|ontology_enrichment_celltype=CL:0002319!1.65e-09!25;CL:0000133!7.32e-09!59;CL:0000047!5.52e-08!8;CL:0002605!6.28e-07!3|ontology_enrichment_celltype_v019=CL:0000047;1.93e-07;2!CL:0002319;2.95e-07;25|ontology_enrichment_celltype_v019_2=CL:0000047,5.81e-10,8;CL:0002319,2.83e-07,25|ontology_enrichment_development_v019=UBERON:0006601;5.85e-23;82!UBERON:0006215;3.86e-10;3!UBERON:0006241;7.45e-09;3!UBERON:0003057;7.45e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.18e-102!82;UBERON:0005743!2.56e-100!86;UBERON:0001049!5.89e-96!57;UBERON:0005068!5.89e-96!57;UBERON:0006241!5.89e-96!57;UBERON:0007135!5.89e-96!57;UBERON:0000073!3.01e-95!94;UBERON:0001016!3.01e-95!94;UBERON:0000955!1.47e-85!69;UBERON:0006238!1.47e-85!69;UBERON:0002616!4.08e-81!59;UBERON:0003075!1.09e-79!86;UBERON:0007284!1.09e-79!86;UBERON:0002346!1.95e-75!90;UBERON:0002780!2.96e-75!41;UBERON:0001890!2.96e-75!41;UBERON:0006240!2.96e-75!41;UBERON:0003080!3.23e-73!42;UBERON:0002020!4.56e-70!34;UBERON:0003528!4.56e-70!34;UBERON:0001893!6.37e-70!34;UBERON:0002791!8.31e-68!33;UBERON:0001869!2.52e-66!32;UBERON:0003056!3.96e-63!61;UBERON:0004121!7.09e-54!169;UBERON:0000033!6.99e-53!123;UBERON:0000924!3.24e-52!173;UBERON:0006601!3.24e-52!173;UBERON:0000956!5.31e-52!25;UBERON:0000203!5.31e-52!25;UBERON:0000153!1.12e-49!129;UBERON:0007811!1.12e-49!129;UBERON:0002619!1.36e-46!22;UBERON:0007023!4.03e-42!115;UBERON:0001950!5.40e-42!20;UBERON:0003076!1.46e-22!15;UBERON:0003057!1.46e-22!15;UBERON:0002420!1.21e-19!9;UBERON:0007245!1.21e-19!9;UBERON:0010009!1.21e-19!9;UBERON:0010011!1.21e-19!9;UBERON:0000454!1.21e-19!9;UBERON:0002308!4.95e-19!9;UBERON:0000125!4.95e-19!9;UBERON:0000025!5.81e-19!194;UBERON:0004732!1.07e-18!13;UBERON:0004733!4.86e-17!12;UBERON:0002028!4.86e-17!12;UBERON:0007277!4.86e-17!12;UBERON:0000064!1.42e-15!219;UBERON:0009663!3.65e-15!7;UBERON:0001871!9.94e-15!7;UBERON:0000200!1.35e-14!6;UBERON:0000349!9.12e-13!5;UBERON:0000483!1.08e-12!309;UBERON:0004111!1.44e-12!241;UBERON:0002298!1.71e-12!8;UBERON:0000119!2.01e-12!312;UBERON:0001872!3.05e-12!5;UBERON:0002021!4.21e-12!5;UBERON:0002680!8.26e-12!9;UBERON:0001895!8.26e-12!9;UBERON:0010092!8.26e-12!9;UBERON:0000477!1.62e-11!286;UBERON:0000475!8.21e-11!365;UBERON:0000369!7.93e-10!4;UBERON:0002435!7.93e-10!4;UBERON:0000204!7.93e-10!4;UBERON:0010082!7.93e-10!4;UBERON:0002771!2.18e-08!3;UBERON:0005383!8.84e-08!3;UBERON:0005382!8.84e-08!3;UBERON:0001894!1.22e-07!7;UBERON:0006222!1.22e-07!7;UBERON:0000062!2.30e-07!511;UBERON:0000988!2.48e-07!3;UBERON:0000922!2.62e-07!612;UBERON:0002240!2.65e-07!3;UBERON:0006331!3.02e-07!3;UBERON:0001896!4.65e-07!3;UBERON:0005290!4.65e-07!3;UBERON:0010096!4.65e-07!3|ontology_enrichment_uberon_v019=UBERON:0001893;5.68e-71;34!UBERON:0003528;8.97e-71;34!UBERON:0002020;8.97e-71;34!UBERON:0001869;1.01e-70;32!UBERON:0002791;2.11e-70;32!UBERON:0002780;5.18e-63;41!UBERON:0001890;5.18e-63;41!UBERON:0000956;8.70e-61;25!UBERON:0000203;8.70e-61;25!UBERON:0000073;1.29e-60;53!UBERON:0002616;1.29e-60;53!UBERON:0002619;7.52e-59;22!UBERON:0001950;5.37e-53;20!UBERON:0001017;1.75e-44;75!UBERON:0000955;2.57e-43;68!UBERON:0001016;5.32e-38;83!UBERON:0002420;1.77e-24;9!UBERON:0007245;1.77e-24;9!UBERON:0010009;1.77e-24;9!UBERON:0010011;1.77e-24;9!UBERON:0000454;1.77e-24;9!UBERON:0000125;1.06e-23;9!UBERON:0002308;1.06e-23;9!UBERON:0004732;9.77e-20;13!UBERON:0009663;8.60e-19;7!UBERON:0000200;4.60e-18;6!UBERON:0004733;1.16e-17;12!UBERON:0002028;1.16e-17;12!UBERON:0000349;9.04e-16;5!UBERON:0002298;9.11e-16;6!UBERON:0001871;1.16e-15;6!UBERON:0001872;4.18e-15;5!UBERON:0002021;6.75e-15;5!UBERON:0007023;8.72e-15;114!UBERON:0011216;2.73e-13;132!UBERON:0000369;4.86e-12;4!UBERON:0002435;4.86e-12;4!UBERON:0000204;4.86e-12;4!UBERON:0002680;2.88e-11;9!UBERON:0001895;2.88e-11;9!UBERON:0002784;7.35e-11;4!UBERON:0001870;1.01e-09;3!UBERON:0005383;1.92e-09;3!UBERON:0005382;1.92e-09;3!UBERON:0001894;1.94e-09;7!UBERON:0010314;3.58e-09;132!UBERON:0000988;7.24e-09;3!UBERON:0002240;7.45e-09;3!UBERON:0005174;7.45e-09;3!UBERON:0001137;7.45e-09;3!UBERON:0001896;1.36e-08;3!UBERON:0005290;1.36e-08;3!UBERON:0004121;1.03e-07;165!UBERON:0001954;1.87e-07;2!UBERON:0003022;1.87e-07;2!UBERON:0002421;1.87e-07;2!UBERON:0002600;1.87e-07;2!UBERON:0002771;2.02e-07;2!UBERON:0001876;2.09e-07;2!UBERON:0002702;3.76e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.97e-118,81;UBERON:0001049,2.08e-115,56;UBERON:0005068,2.08e-115,56;UBERON:0006241,2.08e-115,56;UBERON:0007135,2.08e-115,56;UBERON:0001016,1.95e-112,89;UBERON:0000073,1.09e-107,53;UBERON:0002616,1.09e-107,53;UBERON:0000955,4.68e-100,68;UBERON:0006238,4.68e-100,68;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |||
|TSSclassifier=N | |||
|UniProt=D6RBH3 | |||
|association_with_transcript=-143bp_to_ENST00000505375_5end | |||
|coexpression_cluster_id=C3066 | |||
|description=CAGE_peak_7_at_GPM6A_5end | |||
|id=chr4:176733558..176733609,- | |||
|ontology_enrichment_celltype=CL:0002319!1.65e-09!25;CL:0000133!7.32e-09!59;CL:0000047!5.52e-08!8;CL:0002605!6.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.93e-07;2!CL:0002319;2.95e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.81e-10,8;CL:0002319,2.83e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.85e-23;82!UBERON:0006215;3.86e-10;3!UBERON:0006241;7.45e-09;3!UBERON:0003057;7.45e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@GPM6A | |||
}} |
Revision as of 03:28, 13 September 2013
Short description: | p7@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GPM6A_5end |
Coexpression cluster: | C3066_Neurons_occipital_amygdala_medial_hippocampus_cerebellum_Neural |
Association with transcript: | -143bp_to_ENST00000505375_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | D6RBH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.81e-10 | 8 |
neural cell | 2.83e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.