FFCP PHASE1:Hg19::chr17:42988004..42988033,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2670|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4235|TSSclassifier=S|UniProt=A7REI1|association_with_transcript=0bp_to_DQ979832_5end|coexpression_cluster_id=C4|description=CAGE_peak_21_at_GFAP_5end|id=chr17:42988004..42988033,-|ontology_enrichment_celltype=CL:0002605!2.97e-12!3;CL:0000128!7.62e-09!7;CL:0000126!7.62e-09!7;CL:0000127!7.62e-09!7;CL:0002453!7.62e-09!7|ontology_enrichment_celltype_v019=CL:0002605;4.75e-16;3!CL:0000128;9.53e-12;7!CL:0000126;9.53e-12;7!CL:0000127;9.53e-12;7|ontology_enrichment_celltype_v019_2=CL:0002605,3.59e-16,3;CL:0000128,8.29e-12,7;CL:0000126,8.29e-12,7;CL:0000127,8.29e-12,7;CL:0002453,8.29e-12,7|ontology_enrichment_development_v019=UBERON:0006241;4.58e-17;3!UBERON:0003057;4.58e-17;3!UBERON:0006601;6.96e-15;82!UBERON:0006215;1.69e-07;3!UBERON:0005425;8.57e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.00e-129!57;UBERON:0005068!3.00e-129!57;UBERON:0006241!3.00e-129!57;UBERON:0007135!3.00e-129!57;UBERON:0001017!2.87e-112!82;UBERON:0002616!2.92e-107!59;UBERON:0005743!1.11e-106!86;UBERON:0000073!4.76e-100!94;UBERON:0001016!4.76e-100!94;UBERON:0000955!1.66e-98!69;UBERON:0006238!1.66e-98!69;UBERON:0002020!4.95e-91!34;UBERON:0003528!4.95e-91!34;UBERON:0001893!9.44e-91!34;UBERON:0002780!1.23e-90!41;UBERON:0001890!1.23e-90!41;UBERON:0006240!1.23e-90!41;UBERON:0003080!2.49e-88!42;UBERON:0002791!1.31e-87!33;UBERON:0003075!9.47e-87!86;UBERON:0007284!9.47e-87!86;UBERON:0001869!1.72e-83!32;UBERON:0002346!1.77e-82!90;UBERON:0000956!6.52e-61!25;UBERON:0000203!6.52e-61!25;UBERON:0003056!1.16e-58!61;UBERON:0007023!2.02e-57!115;UBERON:0000033!3.58e-54!123;UBERON:0004121!1.04e-51!169;UBERON:0000153!3.26e-51!129;UBERON:0007811!3.26e-51!129;UBERON:0002619!1.28e-50!22;UBERON:0000924!2.75e-50!173;UBERON:0006601!2.75e-50!173;UBERON:0001950!6.13e-44!20;UBERON:0003076!5.07e-40!15;UBERON:0003057!5.07e-40!15;UBERON:0004732!9.35e-33!13;UBERON:0002308!2.16e-31!9;UBERON:0000125!2.16e-31!9;UBERON:0000025!4.03e-31!194;UBERON:0002420!4.94e-31!9;UBERON:0007245!4.94e-31!9;UBERON:0010009!4.94e-31!9;UBERON:0010011!4.94e-31!9;UBERON:0000454!4.94e-31!9;UBERON:0004733!3.43e-29!12;UBERON:0002028!3.43e-29!12;UBERON:0007277!3.43e-29!12;UBERON:0009663!1.64e-24!7;UBERON:0004111!4.91e-23!241;UBERON:0002298!9.81e-23!8;UBERON:0001871!2.32e-20!7;UBERON:0002680!6.06e-19!9;UBERON:0001895!6.06e-19!9;UBERON:0010092!6.06e-19!9;UBERON:0000477!6.58e-19!286;UBERON:0000349!3.70e-18!5;UBERON:0000064!4.12e-18!219;UBERON:0000483!9.94e-17!309;UBERON:0000119!1.82e-16!312;UBERON:0000475!2.52e-14!365;UBERON:0000200!2.70e-14!6;UBERON:0000369!4.35e-14!4;UBERON:0002435!4.35e-14!4;UBERON:0000204!4.35e-14!4;UBERON:0010082!4.35e-14!4;UBERON:0002240!6.47e-13!3;UBERON:0001896!1.51e-12!3;UBERON:0005290!1.51e-12!3;UBERON:0010096!1.51e-12!3;UBERON:0006331!3.21e-12!3;UBERON:0002021!4.40e-12!5;UBERON:0000988!9.75e-12!3;UBERON:0001872!2.85e-11!5;UBERON:0005383!4.43e-11!3;UBERON:0005382!4.43e-11!3;UBERON:0002771!5.29e-11!3;UBERON:0002037!8.63e-10!6;UBERON:0006215!8.63e-10!6;UBERON:0005162!5.58e-09!2;UBERON:0000122!5.58e-09!2;UBERON:0001954!1.24e-08!2;UBERON:0003022!1.24e-08!2;UBERON:0002421!1.24e-08!2;UBERON:0002600!1.24e-08!2;UBERON:0002148!1.34e-08!2;UBERON:0009662!1.34e-08!2;UBERON:0001875!1.44e-08!2;UBERON:0006514!1.44e-08!2;UBERON:0000062!2.04e-08!511;UBERON:0001897!2.17e-08!2;UBERON:0001876!3.13e-08!2;UBERON:0001873!4.51e-08!2;UBERON:0010122!4.51e-08!2;UBERON:0005174!6.84e-08!5;UBERON:0001137!6.84e-08!5;UBERON:0000481!2.87e-07!347;UBERON:0000923!3.59e-07!604;UBERON:0005291!3.59e-07!604;UBERON:0006598!3.59e-07!604;UBERON:0002532!3.59e-07!604;UBERON:0002050!3.85e-07!605;UBERON:0005423!3.85e-07!605;UBERON:0000922!6.32e-07!612|ontology_enrichment_uberon_v019=UBERON:0000073;1.85e-43;53!UBERON:0002616;1.85e-43;53!UBERON:0003528;8.63e-38;34!UBERON:0002020;8.63e-38;34!UBERON:0001893;1.73e-37;34!UBERON:0002791;2.14e-37;32!UBERON:0004732;4.60e-37;13!UBERON:0002780;3.49e-36;41!UBERON:0001890;3.49e-36;41!UBERON:0001869;2.75e-34;32!UBERON:0004733;2.37e-32;12!UBERON:0002028;2.37e-32;12!UBERON:0001017;9.31e-31;75!UBERON:0002298;3.86e-30;6!UBERON:0000956;1.32e-29;25!UBERON:0000203;1.32e-29;25!UBERON:0000955;3.26e-28;68!UBERON:0001016;2.24e-26;83!UBERON:0000125;4.90e-20;9!UBERON:0002308;4.90e-20;9!UBERON:0002619;1.21e-19;22!UBERON:0002680;3.67e-19;9!UBERON:0001895;3.67e-19;9!UBERON:0002240;4.58e-17;3!UBERON:0005174;4.58e-17;3!UBERON:0001137;4.58e-17;3!UBERON:0001896;2.09e-16;3!UBERON:0005290;2.09e-16;3!UBERON:0002021;4.64e-16;5!UBERON:0000988;1.60e-15;3!UBERON:0002420;3.71e-14;9!UBERON:0007245;3.71e-14;9!UBERON:0010009;3.71e-14;9!UBERON:0010011;3.71e-14;9!UBERON:0000454;3.71e-14;9!UBERON:0007023;7.46e-14;114!UBERON:0001950;1.02e-13;20!UBERON:0009663;4.82e-12;7!UBERON:0005162;9.07e-12;2!UBERON:0000122;9.07e-12;2!UBERON:0001954;2.32e-11;2!UBERON:0001875;2.32e-11;2!UBERON:0003022;2.32e-11;2!UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |||
|TSSclassifier=S | |||
|UniProt=A7REI1 | |||
|association_with_transcript=0bp_to_DQ979832_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_21_at_GFAP_5end | |||
|id=chr17:42988004..42988033,- | |||
|ontology_enrichment_celltype=CL:0002605!2.97e-12!3;CL:0000128!7.62e-09!7;CL:0000126!7.62e-09!7;CL:0000127!7.62e-09!7;CL:0002453!7.62e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.75e-16;3!CL:0000128;9.53e-12;7!CL:0000126;9.53e-12;7!CL:0000127;9.53e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.59e-16,3;CL:0000128,8.29e-12,7;CL:0000126,8.29e-12,7;CL:0000127,8.29e-12,7;CL:0002453,8.29e-12,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.58e-17;3!UBERON:0003057;4.58e-17;3!UBERON:0006601;6.96e-15;82!UBERON:0006215;1.69e-07;3!UBERON:0005425;8.57e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p21@GFAP | |||
}} |
Revision as of 13:59, 11 September 2013
Short description: | p21@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_DQ979832_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A7REI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.59e-16 | 3 |
oligodendrocyte | 8.29e-12 | 7 |
macroglial cell | 8.29e-12 | 7 |
astrocyte | 8.29e-12 | 7 |
oligodendrocyte precursor cell | 8.29e-12 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.