FFCP PHASE1:Hg19::chr6:30848771..30848818,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2730 | |||
|TSSclassifier=strong | |||
|UniProt=D6RB35 | |||
|association_with_transcript=0bp_to_ENST00000503180_5end | |||
|coexpression_cluster_id=C808 | |||
|description=CAGE_peak_7_at_DDR1_5end | |||
|id=chr6:30848771..30848818,+ | |||
|ontology_enrichment_celltype=CL:0000047!5.64e-12!8;CL:0002319!5.16e-09!25;CL:0000540!5.90e-09!6;CL:0000031!5.90e-09!6;CL:0000404!5.90e-09!6;CL:0000133!8.10e-08!59;CL:0002322!2.65e-07!5;CL:0000128!3.11e-07!7;CL:0000126!3.11e-07!7;CL:0000127!3.11e-07!7;CL:0002453!3.11e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.89e-12;25!CL:0000540;4.04e-12;6!CL:0000404;4.04e-12;6!CL:0000128;1.69e-07;7!CL:0000126;1.69e-07;7!CL:0000127;1.69e-07;7!CL:0002605;2.14e-07;3!CL:0002322;8.66e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.38e-16,8;CL:0000540,3.14e-12,6;CL:0000031,3.14e-12,6;CL:0000404,3.14e-12,6;CL:0002319,4.01e-12,25;CL:0000133,2.69e-10,59;CL:0000221,1.53e-07,72;CL:0000128,1.98e-07,7;CL:0000126,1.98e-07,7;CL:0000127,1.98e-07,7;CL:0002453,1.98e-07,7;CL:0002605,2.09e-07,3;CL:0002322,8.33e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.33e-15;82!CL:0000031;4.04e-12;6!UBERON:0006241;4.50e-08;3!UBERON:0003057;4.50e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.89e-82!86;UBERON:0000073!1.38e-80!94;UBERON:0001016!1.38e-80!94;UBERON:0001017!2.05e-80!82;UBERON:0001049!1.49e-73!57;UBERON:0005068!1.49e-73!57;UBERON:0006241!1.49e-73!57;UBERON:0007135!1.49e-73!57;UBERON:0002616!1.16e-68!59;UBERON:0003075!1.19e-62!86;UBERON:0007284!1.19e-62!86;UBERON:0000955!2.02e-62!69;UBERON:0006238!2.02e-62!69;UBERON:0002346!7.48e-59!90;UBERON:0002780!2.58e-55!41;UBERON:0001890!2.58e-55!41;UBERON:0006240!2.58e-55!41;UBERON:0003080!1.17e-53!42;UBERON:0003056!9.28e-50!61;UBERON:0001893!2.14e-46!34;UBERON:0002020!2.47e-46!34;UBERON:0003528!2.47e-46!34;UBERON:0002791!3.73e-45!33;UBERON:0004121!6.30e-45!169;UBERON:0001869!2.56e-43!32;UBERON:0000924!2.92e-43!173;UBERON:0006601!2.92e-43!173;UBERON:0000033!1.53e-40!123;UBERON:0000153!4.40e-40!129;UBERON:0007811!4.40e-40!129;UBERON:0007023!3.84e-34!115;UBERON:0000956!4.15e-34!25;UBERON:0000203!4.15e-34!25;UBERON:0002619!4.69e-30!22;UBERON:0001950!1.83e-27!20;UBERON:0003076!4.67e-20!15;UBERON:0003057!4.67e-20!15;UBERON:0004732!7.77e-17!13;UBERON:0004733!1.17e-15!12;UBERON:0002028!1.17e-15!12;UBERON:0007277!1.17e-15!12;UBERON:0000025!1.03e-14!194;UBERON:0000119!2.90e-14!312;UBERON:0000483!4.04e-14!309;UBERON:0000475!6.03e-14!365;UBERON:0002308!1.81e-13!9;UBERON:0000125!1.81e-13!9;UBERON:0002420!2.57e-13!9;UBERON:0007245!2.57e-13!9;UBERON:0010009!2.57e-13!9;UBERON:0010011!2.57e-13!9;UBERON:0000454!2.57e-13!9;UBERON:0000064!2.84e-12!219;UBERON:0000922!1.14e-11!612;UBERON:0001871!1.82e-11!7;UBERON:0002680!1.85e-11!9;UBERON:0001895!1.85e-11!9;UBERON:0010092!1.85e-11!9;UBERON:0000477!3.32e-11!286;UBERON:0000481!5.17e-11!347;UBERON:0009663!7.54e-11!7;UBERON:0001894!4.22e-10!7;UBERON:0006222!4.22e-10!7;UBERON:0002298!1.57e-09!8;UBERON:0004111!2.29e-09!241;UBERON:0000200!1.17e-08!6;UBERON:0000923!1.46e-08!604;UBERON:0005291!1.46e-08!604;UBERON:0006598!1.46e-08!604;UBERON:0002532!1.46e-08!604;UBERON:0002050!1.71e-08!605;UBERON:0005423!1.71e-08!605;UBERON:0000468!2.79e-08!659;UBERON:0002021!4.52e-08!5;UBERON:0000349!6.87e-08!5;UBERON:0002037!1.05e-07!6;UBERON:0006215!1.05e-07!6;UBERON:0001872!1.09e-07!5;UBERON:0000467!3.02e-07!625;UBERON:0000480!3.49e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.17e-56;34!UBERON:0003528;1.49e-56;34!UBERON:0002020;1.49e-56;34!UBERON:0002791;1.49e-56;32!UBERON:0001869;3.05e-56;32!UBERON:0002780;1.62e-54;41!UBERON:0001890;1.62e-54;41!UBERON:0000073;3.98e-53;53!UBERON:0002616;3.98e-53;53!UBERON:0000956;1.37e-48;25!UBERON:0000203;1.37e-48;25!UBERON:0002619;1.01e-42;22!UBERON:0001950;5.80e-39;20!UBERON:0001017;1.06e-38;75!UBERON:0000955;8.75e-38;68!UBERON:0001016;4.25e-34;83!UBERON:0004732;1.36e-20;13!UBERON:0004733;7.32e-19;12!UBERON:0002028;7.32e-19;12!UBERON:0000125;1.23e-18;9!UBERON:0002308;1.23e-18;9!UBERON:0002420;2.28e-18;9!UBERON:0007245;2.28e-18;9!UBERON:0010009;2.28e-18;9!UBERON:0010011;2.28e-18;9!UBERON:0000454;2.28e-18;9!UBERON:0009663;7.28e-15;7!UBERON:0001871;4.52e-14;6!UBERON:0002298;3.33e-13;6!UBERON:0002680;6.02e-13;9!UBERON:0001895;6.02e-13;9!UBERON:0000200;7.62e-12;6!UBERON:0011216;8.49e-12;132!UBERON:0007023;1.15e-11;114!UBERON:0002021;5.01e-11;5!UBERON:0001894;9.62e-11;7!UBERON:0000349;1.29e-10;5!UBERON:0001872;2.75e-10;5!UBERON:0000369;6.80e-09;4!UBERON:0002435;6.80e-09;4!UBERON:0000204;6.80e-09;4!UBERON:0010314;3.47e-08;132!UBERON:0002240;4.50e-08;3!UBERON:0005174;4.50e-08;3!UBERON:0001137;4.50e-08;3!UBERON:0001896;8.53e-08;3!UBERON:0005290;8.53e-08;3!UBERON:0002037;9.74e-08;6!UBERON:0005383;3.84e-07;3!UBERON:0005382;3.84e-07;3!UBERON:0000988;4.45e-07;3!UBERON:0001870;8.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.10e-108,81;UBERON:0001016,1.21e-101,89;UBERON:0001049,2.52e-101,56;UBERON:0005068,2.52e-101,56;UBERON:0006241,2.52e-101,56;UBERON:0007135,2.52e-101,56;UBERON:0000073,1.89e-94,53;UBERON:0002616,1.89e-94,53;UBERON:0000955,6.09e-85,68;UBERON:0006238,6.09e-85,68;UBERON:0003075,4.24e-78,82;UBERON:0007284,4.24e-78,82;UBERON:0002780,6.39e-76,41;UBERON:0001890,6.39e-76,41;UBERON:0003080,6.39e-76,41;UBERON:0006240,6.39e-76,41;UBERON:0002346,1.07e-73,86;UBERON:0001893,1.89e-66,34;UBERON:0003528,2.34e-66,34;UBERON:0002020,2.34e-66,34;UBERON:0002791,2.15e-62,32;UBERON:0010371,2.90e-62,104;UBERON:0001869,5.53e-62,32;UBERON:0003056,7.63e-61,61;UBERON:0004121,3.08e-54,171;UBERON:0000924,3.08e-54,171;UBERON:0006601,3.08e-54,171;UBERON:0000956,1.25e-48,25;UBERON:0000203,1.25e-48,25;UBERON:0010314,1.22e-45,132;UBERON:0002619,9.38e-43,22;UBERON:0001950,5.32e-39,20;UBERON:0011216,1.04e-35,223;UBERON:0007023,1.09e-34,114;UBERON:0003076,4.79e-25,15;UBERON:0003057,4.79e-25,15;UBERON:0004732,1.75e-20,13;UBERON:0000025,1.16e-19,192;UBERON:0004733,8.58e-19,12;UBERON:0002028,8.58e-19,12;UBERON:0007277,8.58e-19,12;UBERON:0000125,9.65e-19,9;UBERON:0002308,9.65e-19,9;UBERON:0002420,1.60e-18,9;UBERON:0007245,1.60e-18,9;UBERON:0010009,1.60e-18,9;UBERON:0010011,1.60e-18,9;UBERON:0000454,1.60e-18,9;UBERON:0009663,5.84e-15,7;UBERON:0001871,4.86e-14,6;UBERON:0002298,3.03e-13,6;UBERON:0000483,5.73e-13,306;UBERON:0002680,7.10e-13,9;UBERON:0001895,7.10e-13,9;UBERON:0010092,7.10e-13,9;UBERON:0004111,8.39e-13,240;UBERON:0000119,1.10e-12,309;UBERON:0000200,8.43e-12,6;UBERON:0002021,5.87e-11,5;UBERON:0001894,9.46e-11,7;UBERON:0006222,9.46e-11,7;UBERON:0000349,1.07e-10,5;UBERON:0001872,2.07e-10,5;UBERON:0000922,1.92e-09,592;UBERON:0000369,5.47e-09,4;UBERON:0002435,5.47e-09,4;UBERON:0000204,5.47e-09,4;UBERON:0010082,5.47e-09,4;UBERON:0002240,4.45e-08,3;UBERON:0005174,4.45e-08,3;UBERON:0001137,4.45e-08,3;UBERON:0001896,8.35e-08,3;UBERON:0005290,8.35e-08,3;UBERON:0010096,8.35e-08,3;UBERON:0002037,1.19e-07,6;UBERON:0006215,1.19e-07,6;UBERON:0000923,2.74e-07,560;UBERON:0010316,2.74e-07,560;UBERON:0005291,2.74e-07,560;UBERON:0006598,2.74e-07,560;UBERON:0010317,2.74e-07,560;UBERON:0002532,2.74e-07,560;UBERON:0005423,2.77e-07,581;UBERON:0005383,3.28e-07,3;UBERON:0005382,3.28e-07,3;UBERON:0000988,4.13e-07,3;UBERON:0002050,4.27e-07,564;UBERON:0001870,8.37e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,2.21617904538218,0.408001382488506,4.07491137921514,15.4567433050771,2.46373965131192,7.53255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49778823507051,1.10864698731282,1.49319135678314,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21085942115945,1.15235184896,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,3.04818467139416,2.78865462886844,7.98190123618352,3.28017106138317,1.09493207722749,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,32.5764437979966,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.671518372484,14.3153839243384,15.4657762555539,9.54842712405788,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51972505240626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.412164046590889,0,0,0,0,0,3.963499449977,0.154048617114644,0.15350367472613,0.827019434907183,0,0.145016693914229,0.681813019328807,5.69805028139119,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,11.1128838964305,0,0,0,0.398495976502139,0,7.306049687774,0,0,0,0,0,0,0,0,0,6.78532922266653,6.86483926397699,7.98455192004777,0,0,0,0,0,0,0.689486746482929,0,0,7.08593108651071,6.99459344027366,1.52581736317083,1.43753037910592,2.36438095162838,5.26524953169534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,14.4912435908456,0.802577647298789,8.19925560038687,0,0,0,0,6.04953580243319,4.59109142445735,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.873633341210151,0,0,0,0,0,0,4.97157629717171,0,0,4.87493128860266,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,5.4037825983881,7.9405119757356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,13.7565440172691,1.44677833618517,1.92555211236127,2.49264202817511,0,0,3.64497339948148,0,2.28536551167675,8.1829157490597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20558190535443,5.81823447667836,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.3184990331373,5.13282815896649,5.73409195690071,11.4256923082958,13.7233050500457,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42426995685538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.107824811396682,1.41539347670307,0,0,0,0,0,0,0,0,0,0,4.88142110733092,4.25089728976755,6.8642559394575,4.71767637753736,7.05800749420811,6.63909623656492,5.49017195148294,4.28308260777463,0,0,0,0,0,0,0,0.451261970095544,0,1.56302802246618,0,0,0,4.38994300019565,1.56215619722769,4.96048311602842,3.7415328014405,10.9394961803644,0,0,0,0,0.535701835878287,3.02655349996942,4.85572483389305,4.32558163567465,0,0,0,3.87427477967941,4.93295801721368,0,0,0,2.82808061848803,0,1.82631744101899,0,0,0.929195074296532,0,0,2.43401581223611,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,1.98950775161368,0,0,0.219881033490858,0,0,0.218559560503957,7.05475944542284,0,0,8.04864715171276,11.8818560130834,25.7819993825874,0,0,0.322289439867886,0,0,0,0,0,0,11.6105062352676,0,6.66316603870964,5.67255897442491,1.5870805215462,0,0,0,1.00933139868063,0.109265571963696,0,0.101988829741982,0,0,0,0.151557396436479,0,4.97501663675268,10.2398665903276,0,0.714193294391221,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0.684466602170562,0,0.502055437748735,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@DDR1 | |||
}} |
Revision as of 10:54, 22 January 2014
Short description: | p7@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DDR1_5end |
Coexpression cluster: | C808_Neural_spinal_cerebral_hippocampus_cerebellum_duodenum_corpus |
Association with transcript: | 0bp_to_ENST00000503180_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | D6RB35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.38e-16 | 8 |
neuron | 3.14e-12 | 6 |
neuroblast | 3.14e-12 | 6 |
electrically signaling cell | 3.14e-12 | 6 |
neural cell | 4.01e-12 | 25 |
neurectodermal cell | 2.69e-10 | 59 |
ectodermal cell | 1.53e-07 | 72 |
oligodendrocyte | 1.98e-07 | 7 |
macroglial cell | 1.98e-07 | 7 |
astrocyte | 1.98e-07 | 7 |
oligodendrocyte precursor cell | 1.98e-07 | 7 |
astrocyte of the cerebral cortex | 2.09e-07 | 3 |
embryonic stem cell | 8.33e-07 | 5 |