FFCP PHASE1:Hg19::chr12:54982420..54982461,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9286 | |||
|TSSclassifier=strong | |||
|UniProt=Q13522,E7ENB4 | |||
|association_with_transcript=0bp_to_ENST00000257905,ENST00000379690,NM_006741,uc001sgg.2_5end | |||
|cluster_id=chr12:54982420..54982461,- | |||
|coexpression_cluster_id=C2217 | |||
|description=CAGE_peak_1_at_PPP1R1A_5end | |||
|id=chr12:54982420..54982461,- | |||
|ontology_enrichment_celltype=CL:0000136!6.40e-08!15;CL:0000325!7.14e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.30e-11;13!CL:1000507;4.43e-07;10!CL:1000494;4.43e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.60e-09,15;CL:1000507,4.98e-07,10;CL:1000494,4.98e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.62e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;7.09e-07;22!DOID:2994;7.09e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.23e-07,22;DOID:2994,7.23e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.89e-48!115;UBERON:0001049!1.35e-29!57;UBERON:0005068!1.35e-29!57;UBERON:0006241!1.35e-29!57;UBERON:0007135!1.35e-29!57;UBERON:0001017!3.89e-29!82;UBERON:0005743!4.54e-29!86;UBERON:0000073!4.58e-27!94;UBERON:0001016!4.58e-27!94;UBERON:0002346!1.44e-26!90;UBERON:0002616!1.59e-25!59;UBERON:0003075!3.75e-24!86;UBERON:0007284!3.75e-24!86;UBERON:0003080!2.56e-23!42;UBERON:0000955!5.25e-23!69;UBERON:0006238!5.25e-23!69;UBERON:0002780!1.74e-22!41;UBERON:0001890!1.74e-22!41;UBERON:0006240!1.74e-22!41;UBERON:0001893!2.83e-22!34;UBERON:0002020!4.04e-22!34;UBERON:0003528!4.04e-22!34;UBERON:0002791!1.23e-21!33;UBERON:0001869!3.07e-21!32;UBERON:0003056!1.24e-16!61;UBERON:0000924!2.39e-16!173;UBERON:0006601!2.39e-16!173;UBERON:0000956!6.61e-16!25;UBERON:0000203!6.61e-16!25;UBERON:0002619!1.08e-15!22;UBERON:0004121!1.21e-14!169;UBERON:0001950!2.23e-14!20;UBERON:0000153!1.90e-12!129;UBERON:0007811!1.90e-12!129;UBERON:0000033!4.78e-12!123;UBERON:0000062!1.11e-09!511;UBERON:0000468!2.42e-09!659;UBERON:0000025!2.66e-09!194;UBERON:0000475!8.70e-09!365;UBERON:0000922!1.11e-08!612;UBERON:0004111!1.88e-08!241;UBERON:0002420!3.54e-08!9;UBERON:0007245!3.54e-08!9;UBERON:0010009!3.54e-08!9;UBERON:0010011!3.54e-08!9;UBERON:0000454!3.54e-08!9;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0000481!1.17e-07!347;UBERON:0003076!1.81e-07!15;UBERON:0003057!1.81e-07!15;UBERON:0000064!3.09e-07!219;UBERON:0002050!8.21e-07!605;UBERON:0005423!8.21e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.93e-22;34!UBERON:0001869;4.33e-22;32!UBERON:0002791;5.76e-22;32!UBERON:0003528;5.84e-22;34!UBERON:0002020;5.84e-22;34!UBERON:0002619;6.84e-21;22!UBERON:0002780;3.81e-19;41!UBERON:0001890;3.81e-19;41!UBERON:0001950;4.31e-19;20!UBERON:0000073;1.35e-18;53!UBERON:0002616;1.35e-18;53!UBERON:0000956;1.64e-17;25!UBERON:0000203;1.64e-17;25!UBERON:0007023;6.54e-16;114!UBERON:0000922;2.18e-14;49!UBERON:0001017;1.44e-12;75!UBERON:0000955;3.12e-12;68!UBERON:0001016;8.24e-12;83!UBERON:0002420;1.29e-10;9!UBERON:0007245;1.29e-10;9!UBERON:0010009;1.29e-10;9!UBERON:0010011;1.29e-10;9!UBERON:0000454;1.29e-10;9!UBERON:0000125;5.68e-10;9!UBERON:0002308;5.68e-10;9!UBERON:0009663;1.25e-08;7!UBERON:0004732;3.55e-08;13!UBERON:0004733;1.12e-07;12!UBERON:0002028;1.12e-07;12!UBERON:0001871;1.56e-07;6!UBERON:0004211;4.43e-07;10!UBERON:0009773;4.43e-07;10!UBERON:0001231;4.43e-07;10!UBERON:0004810;4.43e-07;10!UBERON:0000489;4.85e-07;29!UBERON:0003135;8.24e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.66e-61,114;UBERON:0001049,5.17e-35,56;UBERON:0005068,5.17e-35,56;UBERON:0006241,5.17e-35,56;UBERON:0007135,5.17e-35,56;UBERON:0001017,1.70e-33,81;UBERON:0000073,1.39e-32,53;UBERON:0002616,1.39e-32,53;UBERON:0001016,3.55e-32,89;UBERON:0002346,3.67e-30,86;UBERON:0003075,5.23e-27,82;UBERON:0007284,5.23e-27,82;UBERON:0002780,3.81e-26,41;UBERON:0001890,3.81e-26,41;UBERON:0003080,3.81e-26,41;UBERON:0006240,3.81e-26,41;UBERON:0001893,4.73e-26,34;UBERON:0003528,7.46e-26,34;UBERON:0002020,7.46e-26,34;UBERON:0000955,2.09e-25,68;UBERON:0006238,2.09e-25,68;UBERON:0001869,1.25e-24,32;UBERON:0002791,2.09e-24,32;UBERON:0002619,6.67e-21,22;UBERON:0004121,5.16e-20,171;UBERON:0000924,5.16e-20,171;UBERON:0006601,5.16e-20,171;UBERON:0010371,6.34e-20,104;UBERON:0001950,4.25e-19,20;UBERON:0010314,4.66e-18,132;UBERON:0003056,6.57e-18,61;UBERON:0000956,1.61e-17,25;UBERON:0000203,1.61e-17,25;UBERON:0011216,4.39e-17,223;UBERON:0000025,1.98e-12,192;UBERON:0002420,1.29e-10,9;UBERON:0007245,1.29e-10,9;UBERON:0010009,1.29e-10,9;UBERON:0010011,1.29e-10,9;UBERON:0000454,1.29e-10,9;UBERON:0004111,1.35e-10,240;UBERON:0000125,5.53e-10,9;UBERON:0002308,5.53e-10,9;UBERON:0003076,6.94e-10,15;UBERON:0003057,6.94e-10,15;UBERON:0000922,6.61e-09,592;UBERON:0003103,8.27e-09,68;UBERON:0009663,1.25e-08,7;UBERON:0004732,3.91e-08,13;UBERON:0000489,5.50e-08,31;UBERON:0004733,1.26e-07,12;UBERON:0002028,1.26e-07,12;UBERON:0007277,1.26e-07,12;UBERON:0001871,1.59e-07,6;UBERON:0004810,4.98e-07,10;UBERON:0003135,7.89e-07,11;UBERON:0005423,8.89e-07,581 | |||
|phase1_expression=3.08853244759946,43.6765068737606,11.8401699440616,14.0102617694383,35.3099264597557,0.872338524100369,75.9899634504932,27.1639545573537,178.12859843229,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,4.03395087871065,0,0.730310090387373,0,2.09305798730539,0,4.07491137921514,0.85870796139317,0.273748850145768,0.502170558379211,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0,39.8831284890535,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0,0,0,0,0,0,0,0,19.3938192746057,15.9035721985782,19.055806630601,16.6894298574746,15.3915719034133,21.533664185474,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,237.031915116824,151.355391368354,166.011963777475,0,0.860919069801795,0.514703430895577,0,0,0,0,0,0,1.44331342025273,1.85488647960123,0,0,0,0.190254152234598,0,0,0,0.702012795417713,0.743155811443641,0,0,0.141775097242386,0,0,0.766765358330422,0,0.088048434013226,0.414656231081544,0.288239906833923,0.37872730027914,0.190493682876507,0,0,18.8179690624976,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8277978602268,7.8083912314573,7.73288812777695,4.02039036802437,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,2.0694614258501,0,0,0,0.195801157462741,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,2.96836132889982,0,0,0.0821271560138091,0,0,0.604297247958111,0,0,0,0,0.262248829918848,8.57279264524082,4.08181286653398,13.3339460760065,10.2297457257282,3.58875538235777,0,0,0,0,2.16757150035082,9.03041592938736,8.15604073744123,14.1282921517883,5.37299411333228,0.219259876645935,0,0.256450125116389,0.328014645699706,0,130.862084792607,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.290033387828457,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,125.211255033116,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0.894704431569664,0,0,0,0,0,0,0,0,159.693915406364,0.36408156524854,0,0,0,0.296964680832639,0,50.7015300360812,51.7663452390687,0,0,0,16.3383350365877,8.28851746593443,275.866358900432,0,0,0,0,0,0,8.87790650732403,0,0,39.742642589904,30.9845447860583,35.930483640215,0,0,197.924884093699,0,0,0,22.4083192606952,107.018893111654,0.520874984799877,141.718621730214,101.662797761219,6.10326945268333,6.08185929621735,18.0284047561664,34.0047365588657,0,0,4.54006525172403,0,1.38338342632836,0,8.47449500991663,0.31900115973192,0.274792780205587,0,0,2.98262487150547,0,0,0,0,0,0.158936578980379,3.16497096792041,0,0,0,6.96683351754953,20.610612529278,7.33236173920351,0,0,0,18.3331081707442,65.0087894312019,136.810436303598,0,0.19566461893209,0.971121518136371,4.73501283419269,6.04953580243319,21.1190205525038,3.91756793696625,0.300646838828985,1.24425829676697,0,0.330991955875499,0.941798755221676,3.58417289318877,0.569219092059585,0,0.347119476670262,0,0,11.881413440458,0,0,0,0,7.08019820365462,0.0882561266915003,13.7848251876125,0,0,26.5272235055132,0.782205530939212,0.0801588202515337,12.5937266896218,0.19980960958213,8.35724419493815,0.687219576995494,0,0,0,0,0,0.104602846312333,0,0,87.0609418629195,42.4406674565178,0,0.429765441419957,0,97.4695580440167,75.3937794998439,31.5864130813798,46.3255281157659,109.452642274826,121.851615763262,66.5788212343457,0,10.4846354574708,0,0.164831716762333,0.13480708770837,0,0,31.8091875923721,28.6027152834309,12.2172392833415,5.36403802729212,7.47792608452533,0,0,48.7211444397358,0,158.557083085987,37.3476667521186,0,0,0,92.9103924285377,131.094210132355,0,0,0,0,1.19730191562487,0,0,0,93.5003250866166,42.4022044519108,19.6510093669557,10.8430733429006,0,0,0.427149650270779,1.25763444079733,0.414239055347196,4.96166021811951,0,0,0,728.439838711726,555.779495048326,539.780906257219,485.57936608122,0,23.9238408591086,27.3338833380397,24.1618496263545,16.055457479322,12.4240537721275,22.2305122530153,0,0.124980407962107,0.303298235083296,0,0,8.43002830452387,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0.15929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| |||
|short_description=p1@PPP1R1A | |||
}} |
Latest revision as of 06:48, 19 September 2015
Short description: | p1@PPP1R1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP1R1A_5end |
Coexpression cluster: | C2217_mature_skeletal_neuroepithelioma_neuroectodermal_argyrophil_breast_left |
Association with transcript: | 0bp_to_ENST00000257905, ENST00000379690, NM_006741, uc001sgg.2_5end |
EntrezGene: | PPP1R1A |
HGNC: | 9286 |
UniProt: | Q13522E7ENB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.60e-09 | 15 |
kidney tubule cell | 4.98e-07 | 10 |
nephron tubule epithelial cell | 4.98e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.23e-07 | 22 |
germ cell cancer | 7.23e-07 | 22 |