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{{Coexpression_clusters
{{Coexpression_clusters
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0316768320920175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92708491902032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|full_id=C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon
|full_id=C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon
|gostat_on_coexpression_clusters=GO:0004033!aldo-keto reductase activity!0.0130238168629013!218;8644
|gostat_on_coexpression_clusters=GO:0004033!aldo-keto reductase activity!0.0130238168629013!218;8644

Revision as of 17:21, 12 September 2012


Full id: C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon



Phase1 CAGE Peaks

Hg19::chr10:115999004..115999019,+p1@VWA2
Hg19::chr10:115999110..115999141,+p4@VWA2
Hg19::chr10:115999180..115999190,+p7@VWA2
Hg19::chr10:129703363..129703373,+p@chr10:129703363..129703373
+
Hg19::chr10:129703377..129703388,+p@chr10:129703377..129703388
+
Hg19::chr10:129703392..129703416,+p@chr10:129703392..129703416
+
Hg19::chr10:129703430..129703445,+p@chr10:129703430..129703445
+
Hg19::chr10:129704201..129704232,-p@chr10:129704201..129704232
-
Hg19::chr10:129704382..129704389,+p@chr10:129704382..129704389
+
Hg19::chr10:129704395..129704457,+p@chr10:129704395..129704457
+
Hg19::chr10:129704473..129704478,+p@chr10:129704473..129704478
+
Hg19::chr10:129704512..129704515,+p@chr10:129704512..129704515
+
Hg19::chr10:129704562..129704569,+p@chr10:129704562..129704569
+
Hg19::chr10:129704613..129704655,+p@chr10:129704613..129704655
+
Hg19::chr10:129710296..129710320,-p@chr10:129710296..129710320
-
Hg19::chr10:29212181..29212188,+p@chr10:29212181..29212188
+
Hg19::chr10:29213480..29213487,-p@chr10:29213480..29213487
-
Hg19::chr10:29213612..29213644,+p@chr10:29213612..29213644
+
Hg19::chr10:5077525..5077540,+p3@AKR1C3
Hg19::chr10:5530789..5530809,-p@chr10:5530789..5530809
-
Hg19::chr10:65730100..65730104,-p@chr10:65730100..65730104
-
Hg19::chr10:65821760..65821780,+p@chr10:65821760..65821780
+
Hg19::chr10:82723188..82723191,-p@chr10:82723188..82723191
-
Hg19::chr11:20362300..20362305,+p@chr11:20362300..20362305
+
Hg19::chr11:33890031..33890035,+p@chr11:33890031..33890035
+
Hg19::chr11:41519057..41519065,-p@chr11:41519057..41519065
-
Hg19::chr11:42142040..42142055,+p@chr11:42142040..42142055
+
Hg19::chr11:55029628..55029641,+p1@TRIM48
Hg19::chr11:61355815..61355827,-p@chr11:61355815..61355827
-
Hg19::chr11:69634097..69634102,-p7@FGF3
Hg19::chr11:69634129..69634145,-p3@FGF3
Hg19::chr11:69634149..69634169,-p2@FGF3
Hg19::chr11:69634178..69634189,-p4@FGF3
Hg19::chr11:69640098..69640109,+p@chr11:69640098..69640109
+
Hg19::chr11:69640117..69640124,+p@chr11:69640117..69640124
+
Hg19::chr11:69640133..69640140,+p@chr11:69640133..69640140
+
Hg19::chr11:69655881..69655893,+p@chr11:69655881..69655893
+
Hg19::chr11:69655969..69655978,+p@chr11:69655969..69655978
+
Hg19::chr11:7597752..7597757,+p38@PPFIBP2
Hg19::chr11:86502231..86502240,-p@chr11:86502231..86502240
-
Hg19::chr12:116156829..116156831,-p@chr12:116156829..116156831
-
Hg19::chr12:116200801..116200808,-p@chr12:116200801..116200808
-
Hg19::chr12:116200864..116200875,-p@chr12:116200864..116200875
-
Hg19::chr12:116200913..116200922,-p@chr12:116200913..116200922
-
Hg19::chr12:121131976..121131987,+p@chr12:121131976..121131987
+
Hg19::chr12:130617969..130617976,+p@chr12:130617969..130617976
+
Hg19::chr12:130618024..130618032,+p@chr12:130618024..130618032
+
Hg19::chr12:15722105..15722121,+p@chr12:15722105..15722121
+
Hg19::chr12:22688226..22688249,-p9@KIAA0528
Hg19::chr12:27398584..27398595,+p8@STK38L
Hg19::chr12:27925654..27925663,-p@chr12:27925654..27925663
-
Hg19::chr12:27932375..27932389,+p15@KLHDC5
Hg19::chr12:28126518..28126555,-p@chr12:28126518..28126555
-
Hg19::chr12:28182901..28182931,+p@chr12:28182901..28182931
+
Hg19::chr12:41186960..41186982,-p@chr12:41186960..41186982
-
Hg19::chr12:41194014..41194019,+p@chr12:41194014..41194019
+
Hg19::chr12:41194024..41194052,+p@chr12:41194024..41194052
+
Hg19::chr12:46057488..46057497,-p@chr12:46057488..46057497
-
Hg19::chr12:46121294..46121301,-p12@LOC400027
Hg19::chr12:46124826..46124840,+p@chr12:46124826..46124840
+
Hg19::chr12:46124855..46124858,+p@chr12:46124855..46124858
+
Hg19::chr12:54535470..54535475,+p@chr12:54535470..54535475
+
Hg19::chr12:55223769..55223774,+p@chr12:55223769..55223774
+
Hg19::chr12:55224450..55224471,+p2@MUCL1
Hg19::chr12:55224476..55224495,+p3@MUCL1
Hg19::chr12:55224505..55224522,+p5@MUCL1
Hg19::chr12:55224582..55224591,+p10@MUCL1
Hg19::chr12:65516484..65516493,-p@chr12:65516484..65516493
-
Hg19::chr12:79406792..79406813,+p@chr12:79406792..79406813
+
Hg19::chr12:79406817..79406825,+p@chr12:79406817..79406825
+
Hg19::chr12:79756320..79756329,-p@chr12:79756320..79756329
-
Hg19::chr12:79756349..79756364,-p@chr12:79756349..79756364
-
Hg19::chr12:79756373..79756391,-p@chr12:79756373..79756391
-
Hg19::chr12:79756403..79756414,-p@chr12:79756403..79756414
-
Hg19::chr12:84126726..84126727,-p@chr12:84126726..84126727
-
Hg19::chr12:84178253..84178258,-p@chr12:84178253..84178258
-
Hg19::chr12:84178276..84178289,-p@chr12:84178276..84178289
-
Hg19::chr12:84664596..84664600,+p@chr12:84664596..84664600
+
Hg19::chr12:84664662..84664670,+p3@ENST00000547882
Hg19::chr12:84664687..84664694,+p4@ENST00000547882
Hg19::chr12:84664700..84664710,+p1@ENST00000547882
Hg19::chr12:84664736..84664743,+p2@ENST00000547882
Hg19::chr12:89363179..89363191,+p@chr12:89363179..89363191
+
Hg19::chr13:101090885..101090903,+p@chr13:101090885..101090903
+
Hg19::chr13:101090921..101090936,+p@chr13:101090921..101090936
+
Hg19::chr13:31611296..31611303,-p@chr13:31611296..31611303
-
Hg19::chr14:25326297..25326305,-p@chr14:25326297..25326305
-
Hg19::chr14:25326318..25326332,-p@chr14:25326318..25326332
-
Hg19::chr14:56079234..56079242,+p10@AB527439
Hg19::chr14:57021818..57021822,+p@chr14:57021818..57021822
+
Hg19::chr14:59159939..59159979,+p@chr14:59159939..59159979
+
Hg19::chr14:89802911..89802924,-p@chr14:89802911..89802924
-
Hg19::chr14:89802926..89802934,-p@chr14:89802926..89802934
-
Hg19::chr15:101343295..101343307,-p@chr15:101343295..101343307
-
Hg19::chr15:71407352..71407363,+p@chr15:71407352..71407363
+
Hg19::chr15:71407437..71407448,+p@chr15:71407437..71407448
+
Hg19::chr15:71685918..71685922,-p@chr15:71685918..71685922
-
Hg19::chr15:89655898..89655913,+p@chr15:89655898..89655913
+
Hg19::chr15:89655929..89655934,+p@chr15:89655929..89655934
+
Hg19::chr15:89655990..89655997,+p@chr15:89655990..89655997
+
Hg19::chr15:89659336..89659344,+p33@ABHD2
Hg19::chr15:94841060..94841072,+p11@MCTP2
Hg19::chr16:50425471..50425482,+p@chr16:50425471..50425482
+
Hg19::chr16:50426225..50426231,-p@chr16:50426225..50426231
-
Hg19::chr16:50502335..50502357,+p@chr16:50502335..50502357
+
Hg19::chr16:50553120..50553126,-p@chr16:50553120..50553126
-
Hg19::chr16:50581615..50581631,+p@chr16:50581615..50581631
+
Hg19::chr16:50582928..50582933,+p@chr16:50582928..50582933
+
Hg19::chr16:50583018..50583026,+p@chr16:50583018..50583026
+
Hg19::chr16:50583050..50583076,+p@chr16:50583050..50583076
+
Hg19::chr16:66088105..66088108,-p@chr16:66088105..66088108
-
Hg19::chr17:19650264..19650287,-p@chr17:19650264..19650287
-
Hg19::chr17:19651598..19651620,-p1@ALDH3A1
Hg19::chr17:39093486..39093495,-p8@KRT23
Hg19::chr17:39093516..39093527,-p2@KRT23
Hg19::chr17:56494830..56494851,-p4@RNF43
Hg19::chr17:59657604..59657621,-p@chr17:59657604..59657621
-
Hg19::chr17:63528638..63528642,+p@chr17:63528638..63528642
+
Hg19::chr17:79952161..79952162,+p@chr17:79952161..79952162
+
Hg19::chr17:79952258..79952274,+p@chr17:79952258..79952274
+
Hg19::chr17:79952303..79952334,+p@chr17:79952303..79952334
+
Hg19::chr17:79952341..79952352,+p@chr17:79952341..79952352
+
Hg19::chr17:79952353..79952362,+p@chr17:79952353..79952362
+
Hg19::chr17:79970295..79970307,+p@chr17:79970295..79970307
+
Hg19::chr17:79970753..79970763,+p15@ASPSCR1
Hg19::chr17:79970912..79970922,+p12@ASPSCR1
Hg19::chr17:79970924..79970946,+p6@ASPSCR1
Hg19::chr17:79970951..79970966,+p8@ASPSCR1
Hg19::chr17:79973593..79973633,-p@chr17:79973593..79973633
-
Hg19::chr17:79973783..79973793,+p@chr17:79973783..79973793
+
Hg19::chr17:79973884..79973909,+p@chr17:79973884..79973909
+
Hg19::chr17:79973963..79973972,+p@chr17:79973963..79973972
+
Hg19::chr17:79974020..79974025,+p@chr17:79974020..79974025
+
Hg19::chr17:79974036..79974045,+p@chr17:79974036..79974045
+
Hg19::chr17:79974321..79974331,+p@chr17:79974321..79974331
+
Hg19::chr17:79974374..79974382,+p@chr17:79974374..79974382
+
Hg19::chr18:10085304..10085314,+p@chr18:10085304..10085314
+
Hg19::chr18:10085504..10085505,+p@chr18:10085504..10085505
+
Hg19::chr18:10085554..10085562,+p@chr18:10085554..10085562
+
Hg19::chr18:10085799..10085809,+p@chr18:10085799..10085809
+
Hg19::chr18:10085817..10085825,+p@chr18:10085817..10085825
+
Hg19::chr18:10454647..10454682,+p2@APCDD1
Hg19::chr18:10456269..10456275,-p@chr18:10456269..10456275
-
Hg19::chr18:28978481..28978484,-p@chr18:28978481..28978484
-
Hg19::chr18:37331745..37331763,-p@chr18:37331745..37331763
-
Hg19::chr18:37420947..37420953,+p@chr18:37420947..37420953
+
Hg19::chr18:37604001..37604006,+p@chr18:37604001..37604006
+
Hg19::chr18:39258990..39258996,-p@chr18:39258990..39258996
-
Hg19::chr18:39798771..39798780,-p@chr18:39798771..39798780
-
Hg19::chr18:53253112..53253124,-p51@TCF4
Hg19::chr18:53254728..53254740,-p79@TCF4
Hg19::chr18:53254750..53254764,-p58@TCF4
Hg19::chr1:144618112..144618116,+p4@NBPF8
Hg19::chr1:167237970..167237996,+p@chr1:167237970..167237996
+
Hg19::chr1:167238001..167238010,+p@chr1:167238001..167238010
+
Hg19::chr1:168756079..168756087,+p3@ENST00000420691
Hg19::chr1:168756151..168756165,+p2@ENST00000420691
Hg19::chr1:168756303..168756308,+p1@MGC4473
Hg19::chr1:181360121..181360133,+p@chr1:181360121..181360133
+
Hg19::chr1:181360150..181360162,+p@chr1:181360150..181360162
+
Hg19::chr1:181360250..181360259,+p@chr1:181360250..181360259
+
Hg19::chr1:181360920..181360925,+p@chr1:181360920..181360925
+
Hg19::chr1:181361950..181361956,+p@chr1:181361950..181361956
+
Hg19::chr1:199134722..199134729,+p@chr1:199134722..199134729
+
Hg19::chr1:203965897..203965916,+p@chr1:203965897..203965916
+
Hg19::chr1:219599419..219599426,-p@chr1:219599419..219599426
-
Hg19::chr20:56706333..56706346,-p@chr20:56706333..56706346
-
Hg19::chr21:36599466..36599476,-p@chr21:36599466..36599476
-
Hg19::chr21:38295313..38295326,-p@chr21:38295313..38295326
-
Hg19::chr22:29317456..29317489,+p@chr22:29317456..29317489
+
Hg19::chr2:103089678..103089689,+p3@SLC9A4
Hg19::chr2:103089726..103089734,+p5@SLC9A4
Hg19::chr2:103089739..103089749,+p4@SLC9A4
Hg19::chr2:103089756..103089768,+p2@SLC9A4
Hg19::chr2:103089782..103089791,+p1@SLC9A4
Hg19::chr2:103090137..103090178,+p6@SLC9A4
Hg19::chr2:103095396..103095398,+p@chr2:103095396..103095398
+
Hg19::chr2:103235035..103235044,+p@chr2:103235035..103235044
+
Hg19::chr2:103235120..103235130,+p@chr2:103235120..103235130
+
Hg19::chr2:103235132..103235142,+p@chr2:103235132..103235142
+
Hg19::chr2:103235211..103235247,+p@chr2:103235211..103235247
+
Hg19::chr2:103235329..103235342,+p@chr2:103235329..103235342
+
Hg19::chr2:103287330..103287331,+p@chr2:103287330..103287331
+
Hg19::chr2:130564567..130564572,-p2@LOC100131048
Hg19::chr2:130564740..130564772,-p1@LOC100131048
Hg19::chr2:130568628..130568649,+p@chr2:130568628..130568649
+
Hg19::chr2:135119411..135119428,+p@chr2:135119411..135119428
+
Hg19::chr2:135119485..135119494,+p@chr2:135119485..135119494
+
Hg19::chr2:135119504..135119516,+p@chr2:135119504..135119516
+
Hg19::chr2:135119522..135119533,+p@chr2:135119522..135119533
+
Hg19::chr2:135119540..135119551,+p@chr2:135119540..135119551
+
Hg19::chr2:135119636..135119642,+p@chr2:135119636..135119642
+
Hg19::chr2:135119852..135119864,+p@chr2:135119852..135119864
+
Hg19::chr2:135119933..135119940,+p@chr2:135119933..135119940
+
Hg19::chr2:135120480..135120481,+p@chr2:135120480..135120481
+
Hg19::chr2:135169581..135169587,+p@chr2:135169581..135169587
+
Hg19::chr2:135170027..135170035,+p@chr2:135170027..135170035
+
Hg19::chr2:135170047..135170048,+p@chr2:135170047..135170048
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Hg19::chr2:220752016..220752022,+p@chr2:220752016..220752022
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Hg19::chr2:220896144..220896147,+p@chr2:220896144..220896147
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Hg19::chr2:222160774..222160804,+p@chr2:222160774..222160804
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Hg19::chr2:235346955..235346968,+p1@ENST00000418025
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Hg19::chr2:23850233..23850248,+p@chr2:23850233..23850248
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Hg19::chr2:34673099..34673137,+p@chr2:34673099..34673137
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Hg19::chr2:97633674..97633677,+p@chr2:97633674..97633677
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Hg19::chr3:150914094..150914095,+p@chr3:150914094..150914095
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Hg19::chr3:150914192..150914197,+p@chr3:150914192..150914197
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Hg19::chr3:150914241..150914244,+p@chr3:150914241..150914244
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Hg19::chr3:171781796..171781805,+p@chr3:171781796..171781805
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Hg19::chr3:186548894..186548902,+p@chr3:186548894..186548902
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Hg19::chr3:194808375..194808396,+p@chr3:194808375..194808396
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Hg19::chr3:57199333..57199352,-p2@IL17RD
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Hg19::chr3:86929211..86929219,+p@chr3:86929211..86929219
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Hg19::chr3:95401565..95401581,-p2@ENST00000463799
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Hg19::chr3:95401928..95401936,-p3@ENST00000494840
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Hg19::chr4:139012685..139012696,-p1@ENST00000505874
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Hg19::chr4:17372710..17372719,+p@chr4:17372710..17372719
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Hg19::chr4:37653629..37653673,-p@chr4:37653629..37653673
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Hg19::chr4:3838289..3838308,-p@chr4:3838289..3838308
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Hg19::chr4:39301903..39301910,-p@chr4:39301903..39301910
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Hg19::chr4:4204390..4204427,-p@chr4:4204390..4204427
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Hg19::chr4:4763533..4763544,+p1@uc003gie.1
Hg19::chr4:6324309..6324314,-p43@PPP2R2C
Hg19::chr4:6324488..6324500,-p12@PPP2R2C
Hg19::chr4:6324582..6324604,-p21@PPP2R2C
Hg19::chr4:6324609..6324619,-p24@PPP2R2C
Hg19::chr4:6324645..6324657,-p15@PPP2R2C
Hg19::chr4:81460545..81460547,-p@chr4:81460545..81460547
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Hg19::chr5:1004438..1004443,+p3@ENST00000502737
Hg19::chr5:1004822..1004837,+p2@ENST00000502737
Hg19::chr5:1049320..1049333,+p@chr5:1049320..1049333
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Hg19::chr5:134907210..134907215,-p@chr5:134907210..134907215
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Hg19::chr5:134914807..134914816,+p5@ENST00000514446
Hg19::chr5:134914843..134914871,+p1@ENST00000514446
Hg19::chr5:134914883..134914897,+p2@ENST00000514446
Hg19::chr5:134914909..134914920,+p4@ENST00000514446
Hg19::chr5:134914928..134914940,+p3@ENST00000514446
Hg19::chr5:134915254..134915270,-p3@CXCL14
Hg19::chr5:134920622..134920655,+p@chr5:134920622..134920655
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Hg19::chr5:146890082..146890106,-p26@DPYSL3
Hg19::chr5:146890197..146890224,-p@chr5:146890197..146890224
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Hg19::chr5:146890510..146890519,-p@chr5:146890510..146890519
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Hg19::chr5:146890526..146890548,-p@chr5:146890526..146890548
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Hg19::chr5:146890606..146890628,-p@chr5:146890606..146890628
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Hg19::chr5:146890655..146890661,-p@chr5:146890655..146890661
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Hg19::chr5:146890667..146890672,-p@chr5:146890667..146890672
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Hg19::chr5:146890870..146890882,-p@chr5:146890870..146890882
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Hg19::chr5:146890999..146891017,-p@chr5:146890999..146891017
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Hg19::chr5:167247466..167247490,+p@chr5:167247466..167247490
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Hg19::chr5:167247494..167247509,+p@chr5:167247494..167247509
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Hg19::chr5:167247511..167247528,+p@chr5:167247511..167247528
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Hg19::chr5:174148301..174148314,+p@chr5:174148301..174148314
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Hg19::chr5:174148333..174148344,+p@chr5:174148333..174148344
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Hg19::chr5:28571958..28571968,-p@chr5:28571958..28571968
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Hg19::chr5:28571974..28571978,-p@chr5:28571974..28571978
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Hg19::chr5:28572013..28572023,-p@chr5:28572013..28572023
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Hg19::chr5:33619040..33619056,-p@chr5:33619040..33619056
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Hg19::chr5:33619084..33619089,-p@chr5:33619084..33619089
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Hg19::chr5:33650078..33650111,-p@chr5:33650078..33650111
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Hg19::chr5:76673620..76673642,+p@chr5:76673620..76673642
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Hg19::chr6:125378772..125378777,+p@chr6:125378772..125378777
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Hg19::chr6:125379193..125379201,+p@chr6:125379193..125379201
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Hg19::chr6:125379216..125379226,+p@chr6:125379216..125379226
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Hg19::chr6:125379227..125379239,+p@chr6:125379227..125379239
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Hg19::chr6:125524852..125524861,+p7@TPD52L1
Hg19::chr6:125538717..125538734,+p@chr6:125538717..125538734
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Hg19::chr6:125538738..125538766,+p@chr6:125538738..125538766
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Hg19::chr6:125540724..125540736,+p12@TPD52L1
Hg19::chr6:125547084..125547089,+p@chr6:125547084..125547089
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Hg19::chr6:21668692..21668725,+p19@LINC00340
Hg19::chr6:23637626..23637637,-p@chr6:23637626..23637637
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Hg19::chr6:23637684..23637686,-p@chr6:23637684..23637686
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Hg19::chr6:23637697..23637700,-p@chr6:23637697..23637700
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Hg19::chr6:23637711..23637717,-p@chr6:23637711..23637717
-
Hg19::chr6:31680315..31680332,+p@chr6:31680315..31680332
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Hg19::chr6:31681839..31681850,-p11@ABHD16A
p1@LY6G6E
Hg19::chr6:31681859..31681865,-p3@LY6G6E
Hg19::chr6:31681875..31681886,-p2@LY6G6E
Hg19::chr6:45398482..45398492,+p@chr6:45398482..45398492
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Hg19::chr6:45398505..45398508,+p@chr6:45398505..45398508
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Hg19::chr6:45399245..45399258,+p@chr6:45399245..45399258
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Hg19::chr6:45399263..45399274,+p@chr6:45399263..45399274
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Hg19::chr6:45399278..45399287,+p@chr6:45399278..45399287
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Hg19::chr6:45399294..45399301,+p@chr6:45399294..45399301
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Hg19::chr6:45399422..45399430,+p@chr6:45399422..45399430
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Hg19::chr6:45399439..45399491,+p@chr6:45399439..45399491
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Hg19::chr6:45399533..45399540,+p@chr6:45399533..45399540
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Hg19::chr6:45399559..45399571,+p@chr6:45399559..45399571
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Hg19::chr6:45399614..45399642,+p@chr6:45399614..45399642
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Hg19::chr6:45399687..45399695,+p@chr6:45399687..45399695
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Hg19::chr6:45399724..45399733,+p@chr6:45399724..45399733
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Hg19::chr6:45405332..45405343,+p@chr6:45405332..45405343
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Hg19::chr6:45405393..45405412,+p@chr6:45405393..45405412
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Hg19::chr6:45405439..45405467,+p@chr6:45405439..45405467
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Hg19::chr6:998859..998863,-p@chr6:998859..998863
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Hg19::chr6:998877..998891,-p@chr6:998877..998891
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Hg19::chr6:998897..998898,-p@chr6:998897..998898
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Hg19::chr7:120378721..120378730,-p@chr7:120378721..120378730
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Hg19::chr7:120378742..120378768,-p@chr7:120378742..120378768
-
Hg19::chr7:120379758..120379765,+p@chr7:120379758..120379765
+
Hg19::chr7:120381610..120381618,+p@chr7:120381610..120381618
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Hg19::chr7:120381624..120381637,+p@chr7:120381624..120381637
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Hg19::chr7:120381641..120381650,+p@chr7:120381641..120381650
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Hg19::chr7:120383546..120383560,+p@chr7:120383546..120383560
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Hg19::chr7:139960476..139960487,-p@chr7:139960476..139960487
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Hg19::chr7:21209872..21209910,+p@chr7:21209872..21209910
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Hg19::chr7:26482694..26482710,-p@chr7:26482694..26482710
-
Hg19::chr7:26482715..26482738,-p@chr7:26482715..26482738
-
Hg19::chr7:79765099..79765103,+p29@GNAI1
Hg19::chr7:79813406..79813433,+p@chr7:79813406..79813433
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Hg19::chr7:79817699..79817717,+p@chr7:79817699..79817717
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Hg19::chr7:79818490..79818497,+p@chr7:79818490..79818497
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Hg19::chr7:79839919..79839924,+p@chr7:79839919..79839924
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Hg19::chr7:79840117..79840122,+p@chr7:79840117..79840122
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Hg19::chr7:79840127..79840130,+p@chr7:79840127..79840130
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Hg19::chr7:79840276..79840283,+p@chr7:79840276..79840283
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Hg19::chr7:79840296..79840308,+p@chr7:79840296..79840308
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Hg19::chr7:79840323..79840338,+p@chr7:79840323..79840338
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Hg19::chr7:79840341..79840362,+p@chr7:79840341..79840362
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Hg19::chr7:90896795..90896804,+p@chr7:90896795..90896804
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Hg19::chr7:91509972..91509984,-p3@MTERF
Hg19::chr7:95705361..95705372,+p@chr7:95705361..95705372
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Hg19::chr7:95705388..95705453,+p@chr7:95705388..95705453
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Hg19::chr7:95705470..95705480,+p@chr7:95705470..95705480
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Hg19::chr7:95709688..95709699,+p@chr7:95709688..95709699
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Hg19::chr7:95766136..95766143,-p@chr7:95766136..95766143
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Hg19::chr7:95766200..95766209,-p@chr7:95766200..95766209
-
Hg19::chr7:95775942..95775990,-p@chr7:95775942..95775990
-
Hg19::chr7:95776211..95776254,-p@chr7:95776211..95776254
-
Hg19::chr7:95776285..95776292,-p@chr7:95776285..95776292
-
Hg19::chr7:95777624..95777637,+p@chr7:95777624..95777637
+
Hg19::chr7:96656030..96656036,-p@chr7:96656030..96656036
-
Hg19::chr8:100549773..100549807,-p@chr8:100549773..100549807
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Hg19::chr8:100549830..100549854,-p@chr8:100549830..100549854
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Hg19::chr8:121815551..121815563,-p@chr8:121815551..121815563
-
Hg19::chr8:121815648..121815680,-p@chr8:121815648..121815680
-
Hg19::chr8:121815999..121816003,-p@chr8:121815999..121816003
-
Hg19::chr8:121823411..121823471,+p2@AK302130
Hg19::chr8:121825088..121825094,-p18@SNTB1
Hg19::chr8:38441495..38441504,+p@chr8:38441495..38441504
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Hg19::chr8:38441518..38441534,+p@chr8:38441518..38441534
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Hg19::chr8:38441548..38441559,+p@chr8:38441548..38441559
+
Hg19::chr8:38441630..38441635,+p@chr8:38441630..38441635
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Hg19::chr8:38459926..38459928,+p@chr8:38459926..38459928
+
Hg19::chr8:39970826..39970832,+p@chr8:39970826..39970832
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Hg19::chr8:39972301..39972319,+p1@ENST00000521257
Hg19::chr8:54464033..54464036,-p@chr8:54464033..54464036
-
Hg19::chr8:57229005..57229034,-p@chr8:57229005..57229034
-
Hg19::chr8:57229064..57229075,-p@chr8:57229064..57229075
-
Hg19::chr8:57359975..57359992,-p@chr8:57359975..57359992
-
Hg19::chr8:57360021..57360028,-p@chr8:57360021..57360028
-
Hg19::chr8:57360032..57360038,-p@chr8:57360032..57360038
-
Hg19::chr8:57360577..57360585,-p@chr8:57360577..57360585
-
Hg19::chr8:57525544..57525580,+p@chr8:57525544..57525580
+
Hg19::chr8:57525935..57525942,+p@chr8:57525935..57525942
+
Hg19::chr8:57526601..57526612,+p@chr8:57526601..57526612
+
Hg19::chr8:63948915..63948924,-p@chr8:63948915..63948924
-
Hg19::chr8:63951318..63951334,-p2@GGH
Hg19::chr8:72938203..72938230,+p@chr8:72938203..72938230
+
Hg19::chr8:73794113..73794122,+p@chr8:73794113..73794122
+
Hg19::chr8:73794614..73794650,+p@chr8:73794614..73794650
+
Hg19::chr8:85893922..85893940,+p@chr8:85893922..85893940
+
Hg19::chr9:129234745..129234747,-p@chr9:129234745..129234747
-
Hg19::chr9:129283229..129283233,-p@chr9:129283229..129283233
-
Hg19::chr9:129291797..129291800,-p@chr9:129291797..129291800
-
Hg19::chr9:129296315..129296326,-p@chr9:129296315..129296326
-
Hg19::chr9:129296343..129296353,-p@chr9:129296343..129296353
-
Hg19::chr9:129296371..129296385,-p@chr9:129296371..129296385
-
Hg19::chr9:129296392..129296405,-p@chr9:129296392..129296405
-
Hg19::chr9:75509796..75509799,-p@chr9:75509796..75509799
-
Hg19::chr9:9763035..9763040,-p@chr9:9763035..9763040
-
Hg19::chr9:97856010..97856019,+p@chr9:97856010..97856019
+
Hg19::chrX:121759039..121759050,-p@chrX:121759039..121759050
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


GO IDGO nameFDR corrected p-value
GO:0004033aldo-keto reductase activity0.0130238168629013



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>


Cell Type
Ontology termp-valuen
endodermal cell7.84e-0859
Uber Anatomy
Ontology termp-valuen
adult organism4.97e-28115
ectoderm2.46e-26173
presumptive ectoderm2.46e-26173
ectoderm-derived structure2.43e-25169
anterior region of body6.02e-25129
craniocervical region6.02e-25129
head1.55e-23123
neural tube9.55e-2357
neural rod9.55e-2357
future spinal cord9.55e-2357
neural keel9.55e-2357
central nervous system1.75e-2282
regional part of nervous system7.24e-2294
nervous system7.24e-2294
neurectoderm6.06e-2090
neural plate4.81e-1986
presumptive neural plate4.81e-1986
brain7.38e-1869
future brain7.38e-1869
regional part of brain1.89e-1759
anterior neural tube1.98e-1742
regional part of forebrain1.99e-1741
forebrain1.99e-1741
future forebrain1.99e-1741
gray matter1.13e-1534
brain grey matter1.13e-1534
telencephalon1.32e-1534
digestive system1.51e-15155
digestive tract1.51e-15155
primitive gut1.51e-15155
regional part of telencephalon3.69e-1533
pre-chordal neural plate6.59e-1561
cerebral hemisphere1.14e-1432
endoderm-derived structure7.67e-14169
endoderm7.67e-14169
presumptive endoderm7.67e-14169
organ part2.61e-13219
organ5.72e-13511
multi-tissue structure1.81e-12347
organism subdivision2.11e-12365
subdivision of digestive tract2.20e-12129
endodermal part of digestive tract2.20e-12129
cerebral cortex4.87e-1225
pallium4.87e-1225
regional part of cerebral cortex2.47e-1122
mixed endoderm/mesoderm-derived structure9.74e-11130
neocortex2.35e-1020
respiratory system2.01e-0972
foregut1.87e-0898
organ segment8.26e-0797
Disease
Ontology termp-valuen
carcinoma3.37e-09106
cell type cancer3.73e-08143


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data