FFCP PHASE1:Hg19::chr4:46126009..46126045,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2565|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4086|TSSclassifier=S|UniProt=F5H2S0,Q8N1C3|association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_1_at_GABRG1_5end|id=chr4:46126009..46126045,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.53e-26;82!UBERON:0006241;9.66e-11;3!UBERON:0003057;9.66e-11;3!UBERON:0006215;1.05e-10;3!UBERON:0010122;2.60e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.08e-81!57;UBERON:0005068!1.08e-81!57;UBERON:0006241!1.08e-81!57;UBERON:0007135!1.08e-81!57;UBERON:0007023!3.20e-73!115;UBERON:0002616!3.83e-68!59;UBERON:0001017!1.39e-66!82;UBERON:0005743!3.16e-65!86;UBERON:0002780!1.33e-64!41;UBERON:0001890!1.33e-64!41;UBERON:0006240!1.33e-64!41;UBERON:0000955!1.34e-63!69;UBERON:0006238!1.34e-63!69;UBERON:0003080!8.41e-63!42;UBERON:0000073!8.20e-60!94;UBERON:0001016!8.20e-60!94;UBERON:0003075!3.93e-58!86;UBERON:0007284!3.93e-58!86;UBERON:0002346!7.94e-55!90;UBERON:0002020!2.99e-52!34;UBERON:0003528!2.99e-52!34;UBERON:0001893!8.68e-52!34;UBERON:0002791!5.54e-50!33;UBERON:0001869!4.49e-48!32;UBERON:0003056!3.87e-44!61;UBERON:0002619!3.32e-40!22;UBERON:0000153!1.68e-38!129;UBERON:0007811!1.68e-38!129;UBERON:0001950!4.07e-36!20;UBERON:0000033!3.95e-35!123;UBERON:0000956!9.95e-35!25;UBERON:0000203!9.95e-35!25;UBERON:0004121!3.92e-27!169;UBERON:0000924!4.00e-26!173;UBERON:0006601!4.00e-26!173;UBERON:0000025!2.56e-21!194;UBERON:0002308!3.84e-19!9;UBERON:0000125!3.84e-19!9;UBERON:0003076!4.64e-19!15;UBERON:0003057!4.64e-19!15;UBERON:0002420!5.56e-19!9;UBERON:0007245!5.56e-19!9;UBERON:0010009!5.56e-19!9;UBERON:0010011!5.56e-19!9;UBERON:0000454!5.56e-19!9;UBERON:0004111!1.79e-15!241;UBERON:0004732!2.78e-15!13;UBERON:0009663!4.34e-15!7;UBERON:0001894!5.63e-14!7;UBERON:0006222!5.63e-14!7;UBERON:0004733!9.86e-14!12;UBERON:0002028!9.86e-14!12;UBERON:0007277!9.86e-14!12;UBERON:0000477!1.05e-13!286;UBERON:0002298!3.40e-13!8;UBERON:0001871!7.57e-13!7;UBERON:0000200!7.91e-13!6;UBERON:0000483!4.84e-12!309;UBERON:0000119!9.18e-12!312;UBERON:0000349!1.78e-11!5;UBERON:0000475!8.46e-11!365;UBERON:0001872!1.32e-10!5;UBERON:0002021!1.81e-10!5;UBERON:0000064!2.42e-10!219;UBERON:0000062!8.33e-10!511;UBERON:0000369!1.19e-09!4;UBERON:0002435!1.19e-09!4;UBERON:0000204!1.19e-09!4;UBERON:0010082!1.19e-09!4;UBERON:0000481!7.90e-09!347;UBERON:0002680!2.17e-08!9;UBERON:0001895!2.17e-08!9;UBERON:0010092!2.17e-08!9;UBERON:0003296!3.54e-08!4;UBERON:0010133!3.54e-08!4;UBERON:0005383!8.44e-08!3;UBERON:0005382!8.44e-08!3;UBERON:0001896!1.16e-07!3;UBERON:0005290!1.16e-07!3;UBERON:0010096!1.16e-07!3;UBERON:0002771!1.35e-07!3;UBERON:0006331!1.44e-07!3;UBERON:0000988!1.85e-07!3;UBERON:0002240!2.70e-07!3|ontology_enrichment_uberon_v019=UBERON:0002780;8.64e-74;41!UBERON:0001890;8.64e-74;41!UBERON:0000073;6.31e-71;53!UBERON:0002616;6.31e-71;53!UBERON:0003528;1.73e-70;34!UBERON:0002020;1.73e-70;34!UBERON:0001893;1.86e-70;34!UBERON:0002791;5.69e-69;32!UBERON:0001869;7.84e-69;32!UBERON:0002619;6.51e-64;22!UBERON:0001950;2.55e-57;20!UBERON:0000956;7.69e-56;25!UBERON:0000203;7.69e-56;25!UBERON:0000955;3.60e-48;68!UBERON:0001017;3.28e-46;75!UBERON:0001016;3.34e-38;83!UBERON:0000125;1.05e-29;9!UBERON:0002308;1.05e-29;9!UBERON:0002420;1.94e-29;9!UBERON:0007245;1.94e-29;9!UBERON:0010009;1.94e-29;9!UBERON:0010011;1.94e-29;9!UBERON:0000454;1.94e-29;9!UBERON:0004732;3.26e-24;13!UBERON:0009663;3.38e-23;7!UBERON:0004733;1.01e-21;12!UBERON:0002028;1.01e-21;12!UBERON:0001894;1.99e-21;7!UBERON:0007023;3.56e-21;114!UBERON:0002298;1.34e-20;6!UBERON:0000200;1.36e-19;6!UBERON:0000349;2.02e-17;5!UBERON:0001871;8.83e-17;6!UBERON:0001872;4.99e-16;5!UBERON:0002021;8.31e-16;5!UBERON:0000369;1.69e-14;4!UBERON:0002435;1.69e-14;4!UBERON:0000204;1.69e-14;4!UBERON:0011216;2.92e-14;132!UBERON:0002784;3.61e-13;4!UBERON:0002680;4.41e-13;9!UBERON:0001895;4.41e-13;9!UBERON:0003296;3.79e-12;4!UBERON:0010133;3.79e-12;4!UBERON:0005383;1.51e-11;3!UBERON:0005382;1.51e-11;3!UBERON:0001896;2.53e-11;3!UBERON:0005290;2.53e-11;3!UBERON:0000988;5.22e-11;3!UBERON:0010314;5.43e-11;132!UBERON:0001870;8.18e-11;3!UBERON:0002240;9.66e-11;3!UBERON:0005174;9.66e-11;3!UBERON:0001137;9.66e-11;3!UBERON:0001873;2.60e-08;2!UBERON:0002148;3.20e-08;2!UBERON:0006331;3.20e-08;2!UBERON:0009662;3.20e-08;2!UBERON:0001954;3.26e-08;2!UBERON:0003022;3.26e-08;2!UBERON:0002421;3.26e-08;2!UBERON:0002600;3.26e-08;2!UBERON:0001897;5.09e-08;2!UBERON:0010225;5.09e-08;2!UBERON:0002771;5.18e-08;2!UBERON:0001876;6.03e-08;2!UBERON:0002702;9.66e-08;2!UBERON:0001875;1.75e-07;2!UBERON:0006514;1.75e-07;2!UBERON:0005162;3.92e-07;2!UBERON:0000122;3.92e-07;2!UBERON:0000007;5.91e-07;2!UBERON:0001905;7.58e-07;2!UBERON:0002757;7.58e-07;2!UBERON:0010134;7.58e-07;2!UBERON:0005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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2565 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4086 | |||
|TSSclassifier=S | |||
|UniProt=F5H2S0,Q8N1C3 | |||
|association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GABRG1_5end | |||
|id=chr4:46126009..46126045,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.53e-26;82!UBERON:0006241;9.66e-11;3!UBERON:0003057;9.66e-11;3!UBERON:0006215;1.05e-10;3!UBERON:0010122;2.60e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@GABRG1 | |||
}} |
Revision as of 11:00, 13 September 2013
Short description: | p1@GABRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GABRG1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 36bp_to_ENST00000540030, NM_173536, uc003gxb.2_5end |
EntrezGene: | GABRG1 |
HGNC: | 4086 |
UniProt: | F5H2S0Q8N1C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.