FFCP PHASE1:Hg19::chr11:120255997..120256048,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:120255997..120256048,+ to FFCP PHASE1:Hg19::chr11:120255997..120256048,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23365 | |EntrezGene=23365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14193 | |HGNC=14193 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMR6 | |UniProt=E9PMR6 | ||
|association_with_transcript=0bp_to_ENST00000529970,ENST00000532993,uc009zau.1,uc010rzn.1_5end | |||
|cluster_id=chr11:120255997..120256048,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_ARHGEF12_5end | |||
|id=chr11:120255997..120256048,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.79e-23;82!UBERON:0006215;9.60e-11;3!UBERON:0006241;4.66e-09;3!UBERON:0003057;4.66e-09;3!UBERON:0010122;4.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.32e-76!57;UBERON:0005068!3.32e-76!57;UBERON:0006241!3.32e-76!57;UBERON:0007135!3.32e-76!57;UBERON:0001017!2.54e-74!82;UBERON:0005743!1.32e-72!86;UBERON:0000073!3.78e-68!94;UBERON:0001016!3.78e-68!94;UBERON:0002616!6.74e-67!59;UBERON:0000955!1.08e-64!69;UBERON:0006238!1.08e-64!69;UBERON:0002780!1.83e-62!41;UBERON:0001890!1.83e-62!41;UBERON:0006240!1.83e-62!41;UBERON:0003080!1.08e-60!42;UBERON:0003075!6.18e-58!86;UBERON:0007284!6.18e-58!86;UBERON:0002346!1.43e-54!90;UBERON:0001893!2.12e-51!34;UBERON:0002020!2.79e-51!34;UBERON:0003528!2.79e-51!34;UBERON:0007023!2.02e-50!115;UBERON:0002791!1.62e-49!33;UBERON:0001869!9.98e-49!32;UBERON:0003056!1.62e-44!61;UBERON:0002619!1.10e-42!22;UBERON:0001950!2.34e-39!20;UBERON:0000153!4.18e-38!129;UBERON:0007811!4.18e-38!129;UBERON:0000033!5.07e-38!123;UBERON:0004121!4.26e-37!169;UBERON:0000956!8.11e-37!25;UBERON:0000203!8.11e-37!25;UBERON:0000924!9.00e-36!173;UBERON:0006601!9.00e-36!173;UBERON:0000025!3.43e-18!194;UBERON:0003076!4.35e-16!15;UBERON:0003057!4.35e-16!15;UBERON:0002420!4.42e-16!9;UBERON:0007245!4.42e-16!9;UBERON:0010009!4.42e-16!9;UBERON:0010011!4.42e-16!9;UBERON:0000454!4.42e-16!9;UBERON:0002308!1.08e-15!9;UBERON:0000125!1.08e-15!9;UBERON:0001871!1.21e-15!7;UBERON:0004111!4.42e-14!241;UBERON:0000477!2.89e-13!286;UBERON:0000200!8.57e-13!6;UBERON:0009663!1.55e-12!7;UBERON:0001894!3.61e-12!7;UBERON:0006222!3.61e-12!7;UBERON:0004733!7.70e-12!12;UBERON:0002028!7.70e-12!12;UBERON:0007277!7.70e-12!12;UBERON:0000475!3.20e-11!365;UBERON:0000483!4.72e-11!309;UBERON:0001872!8.90e-11!5;UBERON:0000119!8.93e-11!312;UBERON:0004732!9.22e-11!13;UBERON:0002298!1.67e-10!8;UBERON:0000064!1.73e-10!219;UBERON:0002021!1.74e-10!5;UBERON:0000349!2.78e-10!5;UBERON:0000481!1.05e-08!347;UBERON:0000369!2.02e-08!4;UBERON:0002435!2.02e-08!4;UBERON:0000204!2.02e-08!4;UBERON:0010082!2.02e-08!4;UBERON:0002680!1.36e-07!9;UBERON:0001895!1.36e-07!9;UBERON:0010092!1.36e-07!9;UBERON:0003296!2.06e-07!4;UBERON:0010133!2.06e-07!4;UBERON:0002771!3.18e-07!3;UBERON:0000922!3.20e-07!612;UBERON:0000468!4.65e-07!659;UBERON:0000062!4.79e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.30e-72;32!UBERON:0002780;1.13e-70;41!UBERON:0001890;1.13e-70;41!UBERON:0002619;5.79e-70;22!UBERON:0001893;1.38e-69;34!UBERON:0003528;1.99e-69;34!UBERON:0002020;1.99e-69;34!UBERON:0002791;5.21e-68;32!UBERON:0000073;1.29e-64;53!UBERON:0002616;1.29e-64;53!UBERON:0001950;2.09e-64;20!UBERON:0000956;4.04e-61;25!UBERON:0000203;4.04e-61;25!UBERON:0001017;7.51e-45;75!UBERON:0000955;1.34e-44;68!UBERON:0001016;1.00e-37;83!UBERON:0001871;8.66e-22;6!UBERON:0002420;4.67e-21;9!UBERON:0007245;4.67e-21;9!UBERON:0010009;4.67e-21;9!UBERON:0010011;4.67e-21;9!UBERON:0000454;4.67e-21;9!UBERON:0000125;1.75e-20;9!UBERON:0002308;1.75e-20;9!UBERON:0000200;3.70e-20;6!UBERON:0004733;2.30e-19;12!UBERON:0002028;2.30e-19;12!UBERON:0001894;4.77e-19;7!UBERON:0004732;9.75e-18;13!UBERON:0002298;2.01e-17;6!UBERON:0007023;2.87e-17;114!UBERON:0001872;8.03e-17;5!UBERON:0002021;2.40e-16;5!UBERON:0000349;5.48e-16;5!UBERON:0011216;8.96e-16;132!UBERON:0009663;2.54e-15;7!UBERON:0000369;6.55e-13;4!UBERON:0002435;6.55e-13;4!UBERON:0000204;6.55e-13;4!UBERON:0002680;3.14e-12;9!UBERON:0001895;3.14e-12;9!UBERON:0002784;1.04e-11;4!UBERON:0003296;3.28e-11;4!UBERON:0010133;3.28e-11;4!UBERON:0001870;4.49e-11;3!UBERON:0010314;1.18e-10;132!UBERON:0005383;6.11e-10;3!UBERON:0005382;6.11e-10;3!UBERON:0000988;1.06e-09;3!UBERON:0001896;1.99e-09;3!UBERON:0005290;1.99e-09;3!UBERON:0002240;4.66e-09;3!UBERON:0005174;4.66e-09;3!UBERON:0001137;4.66e-09;3!UBERON:0002702;6.48e-08;2!UBERON:0002771;8.28e-08;2!UBERON:0001876;1.37e-07;2!UBERON:0001873;4.05e-07;2!UBERON:0001954;4.17e-07;2!UBERON:0003022;4.17e-07;2!UBERON:0002421;4.17e-07;2!UBERON:0002600;4.17e-07;2!UBERON:0001897;6.40e-07;2!UBERON:0002148;6.40e-07;2!UBERON:0006331;6.40e-07;2!UBERON:0009662;6.40e-07;2!UBERON:0010225;6.40e-07;2!UBERON:0002360;8.40e-07;2!UBERON:0000094;8.40e-07;2!UBERON:0010743;8.40e-07;2!UBERON:0001875;8.92e-07;2!UBERON:0006514;8.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.84e-126,56;UBERON:0005068,4.84e-126,56;UBERON:0006241,4.84e-126,56;UBERON:0007135,4.84e-126,56;UBERON:0001017,2.84e-118,81;UBERON:0000073,5.09e-118,53;UBERON:0002616,5.09e-118,53;UBERON:0001016,2.06e-105,89;UBERON:0000955,3.30e-101,68;UBERON:0006238,3.30e-101,68;UBERON:0002780,2.60e-99,41;UBERON:0001890,2.60e-99,41;UBERON:0003080,2.60e-99,41;UBERON:0006240,2.60e-99,41;UBERON:0003075,3.29e-86,82;UBERON:0007284,3.29e-86,82;UBERON:0002346,1.13e-81,86;UBERON:0001869,5.25e-81,32;UBERON:0001893,6.69e-81,34;UBERON:0003528,1.05e-80,34;UBERON:0002020,1.05e-80,34;UBERON:0002791,2.96e-75,32;UBERON:0002619,5.98e-70,22;UBERON:0003056,1.79e-67,61;UBERON:0010371,1.57e-65,104;UBERON:0001950,2.12e-64,20;UBERON:0000956,4.16e-61,25;UBERON:0000203,4.16e-61,25;UBERON:0007023,1.32e-56,114;UBERON:0010314,1.21e-53,132;UBERON:0004121,1.87e-51,171;UBERON:0000924,1.87e-51,171;UBERON:0006601,1.87e-51,171;UBERON:0011216,3.15e-41,223;UBERON:0000025,1.56e-28,192;UBERON:0003076,1.98e-26,15;UBERON:0003057,1.98e-26,15;UBERON:0001871,8.66e-22,6;UBERON:0002420,4.73e-21,9;UBERON:0007245,4.73e-21,9;UBERON:0010009,4.73e-21,9;UBERON:0010011,4.73e-21,9;UBERON:0000454,4.73e-21,9;UBERON:0000125,1.80e-20,9;UBERON:0002308,1.80e-20,9;UBERON:0004111,2.02e-20,240;UBERON:0000200,3.65e-20,6;UBERON:0004733,2.49e-19,12;UBERON:0002028,2.49e-19,12;UBERON:0007277,2.49e-19,12;UBERON:0001894,3.95e-19,7;UBERON:0006222,3.95e-19,7;UBERON:0004732,1.05e-17,13;UBERON:0002298,2.20e-17,6;UBERON:0001872,8.03e-17,5;UBERON:0002021,2.43e-16,5;UBERON:0000349,5.32e-16,5;UBERON:0009663,2.64e-15,7;UBERON:0000483,2.83e-14,306;UBERON:0000119,5.09e-14,309;UBERON:0000369,6.35e-13,4;UBERON:0002435,6.35e-13,4;UBERON:0000204,6.35e-13,4;UBERON:0010082,6.35e-13,4;UBERON:0002680,3.20e-12,9;UBERON:0001895,3.20e-12,9;UBERON:0010092,3.20e-12,9;UBERON:0002784,9.49e-12,4;UBERON:0003296,2.93e-11,4;UBERON:0010133,2.93e-11,4;UBERON:0001870,4.49e-11,3;UBERON:0005383,6.02e-10,3;UBERON:0005382,6.02e-10,3;UBERON:0000988,1.07e-09,3;UBERON:0001896,2.14e-09,3;UBERON:0005290,2.14e-09,3;UBERON:0010096,2.14e-09,3;UBERON:0002240,4.59e-09,3;UBERON:0005174,4.59e-09,3;UBERON:0001137,4.59e-09,3;UBERON:0000922,6.54e-09,592;UBERON:0000923,6.93e-09,560;UBERON:0010316,6.93e-09,560;UBERON:0005291,6.93e-09,560;UBERON:0006598,6.93e-09,560;UBERON:0010317,6.93e-09,560;UBERON:0002532,6.93e-09,560;UBERON:0002050,1.01e-08,564;UBERON:0005423,1.12e-08,581;UBERON:0002702,6.48e-08,2;UBERON:0002771,8.14e-08,2;UBERON:0001876,1.32e-07,2;UBERON:0001873,3.98e-07,2;UBERON:0010122,3.98e-07,2;UBERON:0001954,4.24e-07,2;UBERON:0003022,4.24e-07,2;UBERON:0002421,4.24e-07,2;UBERON:0002600,4.24e-07,2;UBERON:0001897,6.12e-07,2;UBERON:0010225,6.12e-07,2;UBERON:0002148,6.30e-07,2;UBERON:0006331,6.30e-07,2;UBERON:0009662,6.30e-07,2;UBERON:0002360,9.05e-07,2;UBERON:0000094,9.05e-07,2;UBERON:0010743,9.05e-07,2;UBERON:0001875,9.61e-07,2;UBERON:0006514,9.61e-07,2 | |||
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| ||
|short_description=p3@ARHGEF12 | |||
}} | }} |
Latest revision as of 05:31, 16 September 2015
Short description: | p3@ARHGEF12 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGEF12_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000529970, ENST00000532993, uc009zau.1, uc010rzn.1_5end |
EntrezGene: | ARHGEF12 |
HGNC: | 14193 |
UniProt: | E9PMR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data