FFCP PHASE1:Hg19::chrX:92928614..92928625,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:92928614..92928625,- to FFCP PHASE1:Hg19::chrX:92928614..92928625,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4675 | |EntrezGene=4675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7639 | |HGNC=7639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_uc004efq.2_5end | |||
|cluster_id=chrX:92928614..92928625,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_NAP1L3_5end | |||
|id=chrX:92928614..92928625,- | |||
|ontology_enrichment_celltype=CL:0000047!4.90e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.55e-07;6!CL:0000404;5.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.34e-08,8;CL:0000540,5.09e-07,6;CL:0000031,5.09e-07,6;CL:0000404,5.09e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.11e-17;82!UBERON:0006215;3.96e-09;3!UBERON:0006241;1.18e-08;3!UBERON:0003057;1.18e-08;3!CL:0000031;5.55e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.34e-49!86;UBERON:0001017!4.67e-48!82;UBERON:0001049!3.83e-45!57;UBERON:0005068!3.83e-45!57;UBERON:0006241!3.83e-45!57;UBERON:0007135!3.83e-45!57;UBERON:0000073!4.26e-45!94;UBERON:0001016!4.26e-45!94;UBERON:0002616!1.28e-39!59;UBERON:0003075!9.60e-39!86;UBERON:0007284!9.60e-39!86;UBERON:0000955!4.10e-38!69;UBERON:0006238!4.10e-38!69;UBERON:0002346!4.57e-38!90;UBERON:0002780!2.15e-36!41;UBERON:0001890!2.15e-36!41;UBERON:0006240!2.15e-36!41;UBERON:0003080!4.54e-35!42;UBERON:0000924!3.35e-33!173;UBERON:0006601!3.35e-33!173;UBERON:0004121!3.35e-33!169;UBERON:0002020!1.17e-30!34;UBERON:0003528!1.17e-30!34;UBERON:0001893!2.07e-30!34;UBERON:0000033!4.41e-30!123;UBERON:0007023!5.87e-30!115;UBERON:0003056!1.17e-29!61;UBERON:0000153!1.27e-29!129;UBERON:0007811!1.27e-29!129;UBERON:0002791!1.48e-29!33;UBERON:0001869!5.84e-29!32;UBERON:0000956!5.86e-23!25;UBERON:0000203!5.86e-23!25;UBERON:0002619!3.50e-22!22;UBERON:0001950!2.21e-20!20;UBERON:0000475!1.58e-11!365;UBERON:0003076!5.56e-11!15;UBERON:0003057!5.56e-11!15;UBERON:0000064!1.53e-09!219;UBERON:0002420!3.00e-09!9;UBERON:0007245!3.00e-09!9;UBERON:0010009!3.00e-09!9;UBERON:0010011!3.00e-09!9;UBERON:0000454!3.00e-09!9;UBERON:0002308!4.32e-09!9;UBERON:0000125!4.32e-09!9;UBERON:0001871!1.20e-08!7;UBERON:0004733!2.06e-08!12;UBERON:0002028!2.06e-08!12;UBERON:0007277!2.06e-08!12;UBERON:0000483!3.00e-08!309;UBERON:0000025!3.56e-08!194;UBERON:0000119!3.78e-08!312;UBERON:0000477!9.23e-08!286;UBERON:0004732!1.83e-07!13;UBERON:0009663!2.12e-07!7;UBERON:0001894!2.53e-07!7;UBERON:0006222!2.53e-07!7;UBERON:0000200!8.27e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.12e-58;34!UBERON:0002020;1.12e-58;34!UBERON:0002791;1.94e-58;32!UBERON:0001869;2.09e-58;32!UBERON:0002780;2.05e-57;41!UBERON:0001890;2.05e-57;41!UBERON:0002619;1.47e-56;22!UBERON:0001893;1.49e-54;34!UBERON:0000073;5.13e-52;53!UBERON:0002616;5.13e-52;53!UBERON:0001950;9.42e-52;20!UBERON:0000956;3.30e-49;25!UBERON:0000203;3.30e-49;25!UBERON:0000955;8.72e-37;68!UBERON:0001017;3.12e-35;75!UBERON:0001016;8.51e-30;83!UBERON:0002420;5.87e-22;9!UBERON:0007245;5.87e-22;9!UBERON:0010009;5.87e-22;9!UBERON:0010011;5.87e-22;9!UBERON:0000454;5.87e-22;9!UBERON:0000125;1.75e-21;9!UBERON:0002308;1.75e-21;9!UBERON:0001871;2.72e-18;6!UBERON:0009663;4.03e-17;7!UBERON:0001894;1.61e-16;7!UBERON:0004733;1.44e-15;12!UBERON:0002028;1.44e-15;12!UBERON:0000200;2.13e-15;6!UBERON:0004732;3.17e-14;13!UBERON:0002298;5.31e-14;6!UBERON:0002021;8.45e-14;5!UBERON:0001872;1.42e-13;5!UBERON:0007023;1.60e-13;114!UBERON:0000349;2.49e-13;5!UBERON:0011216;4.14e-12;132!UBERON:0003296;6.27e-11;4!UBERON:0010133;6.27e-11;4!UBERON:0000369;1.15e-10;4!UBERON:0002435;1.15e-10;4!UBERON:0000204;1.15e-10;4!UBERON:0002784;4.06e-10;4!UBERON:0002680;4.19e-10;9!UBERON:0001895;4.19e-10;9!UBERON:0010314;7.18e-09;132!UBERON:0002240;1.18e-08;3!UBERON:0005174;1.18e-08;3!UBERON:0001137;1.18e-08;3!UBERON:0001870;1.25e-08;3!UBERON:0005383;1.45e-08;3!UBERON:0005382;1.45e-08;3!UBERON:0000988;3.78e-08;3!UBERON:0001896;1.58e-07;3!UBERON:0005290;1.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.29e-103,56;UBERON:0005068,8.29e-103,56;UBERON:0006241,8.29e-103,56;UBERON:0007135,8.29e-103,56;UBERON:0001017,1.05e-95,81;UBERON:0000073,2.28e-95,53;UBERON:0002616,2.28e-95,53;UBERON:0001016,8.47e-85,89;UBERON:0000955,6.99e-81,68;UBERON:0006238,6.99e-81,68;UBERON:0002780,9.70e-81,41;UBERON:0001890,9.70e-81,41;UBERON:0003080,9.70e-81,41;UBERON:0006240,9.70e-81,41;UBERON:0003528,1.77e-69,34;UBERON:0002020,1.77e-69,34;UBERON:0003075,6.25e-69,82;UBERON:0007284,6.25e-69,82;UBERON:0002346,4.21e-65,86;UBERON:0001869,5.77e-65,32;UBERON:0001893,6.61e-65,34;UBERON:0002791,7.82e-65,32;UBERON:0002619,2.13e-56,22;UBERON:0003056,8.54e-54,61;UBERON:0010371,1.04e-53,104;UBERON:0001950,1.40e-51,20;UBERON:0000956,4.57e-49,25;UBERON:0000203,4.57e-49,25;UBERON:0007023,6.79e-46,114;UBERON:0004121,2.86e-45,171;UBERON:0000924,2.86e-45,171;UBERON:0006601,2.86e-45,171;UBERON:0010314,3.66e-45,132;UBERON:0011216,2.24e-31,223;UBERON:0000025,4.57e-24,192;UBERON:0003076,4.07e-22,15;UBERON:0003057,4.07e-22,15;UBERON:0002420,6.61e-22,9;UBERON:0007245,6.61e-22,9;UBERON:0010009,6.61e-22,9;UBERON:0010011,6.61e-22,9;UBERON:0000454,6.61e-22,9;UBERON:0000125,1.74e-21,9;UBERON:0002308,1.74e-21,9;UBERON:0004111,2.91e-18,240;UBERON:0001871,3.67e-18,6;UBERON:0009663,5.12e-17,7;UBERON:0001894,8.17e-17,7;UBERON:0006222,8.17e-17,7;UBERON:0004733,1.41e-15,12;UBERON:0002028,1.41e-15,12;UBERON:0007277,1.41e-15,12;UBERON:0000200,1.84e-15,6;UBERON:0004732,3.11e-14,13;UBERON:0002298,4.41e-14,6;UBERON:0002021,1.03e-13,5;UBERON:0001872,1.34e-13,5;UBERON:0000349,2.35e-13,5;UBERON:0000483,4.74e-12,306;UBERON:0000119,8.43e-12,309;UBERON:0003296,5.54e-11,4;UBERON:0010133,5.54e-11,4;UBERON:0000369,1.04e-10,4;UBERON:0002435,1.04e-10,4;UBERON:0000204,1.04e-10,4;UBERON:0010082,1.04e-10,4;UBERON:0002784,2.00e-10,4;UBERON:0002680,3.69e-10,9;UBERON:0001895,3.69e-10,9;UBERON:0010092,3.69e-10,9;UBERON:0000922,4.22e-09,592;UBERON:0002240,1.08e-08,3;UBERON:0005174,1.08e-08,3;UBERON:0001137,1.08e-08,3;UBERON:0005383,1.20e-08,3;UBERON:0005382,1.20e-08,3;UBERON:0001870,1.27e-08,3;UBERON:0000988,2.64e-08,3;UBERON:0002050,1.36e-07,564;UBERON:0001896,1.84e-07,3;UBERON:0005290,1.84e-07,3;UBERON:0010096,1.84e-07,3;UBERON:0000923,3.03e-07,560;UBERON:0010316,3.03e-07,560;UBERON:0005291,3.03e-07,560;UBERON:0006598,3.03e-07,560;UBERON:0010317,3.03e-07,560;UBERON:0002532,3.03e-07,560;UBERON:0005423,7.12e-07,581 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,1.09220686065086,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.612002073732759,0,0.85870796139317,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0,0,0.255973222308837,0,0,0.821127996921047,0,0,0,0,0,0.383587685530591,0.722878304769133,0.50133791063589,0.579386075843295,2.3858578411533,0.486634870302636,0.661743720148475,0.221729397462564,0.527008714158756,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0,0,0,0,1.58565817968474,0.927708378250397,0.69716365721711,1.14027160516907,1.51392510525377,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0.100528972411631,0,0,0,0,1.27523445472584,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0,0.254094624222463,2.60279707715243,4.63973287666617,2.51274398001523,4.46557126157214,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.535286966391485,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0.106727557803444,0,0,0.907170879989041,0,0.767309866440312,0,0.128139149255701,0.511707249066704,0.804269605718038,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.984043937099117,0,0,0,0,0,0,0,0.193341436584244,0,0,0.551346289938122,0.322260734604821,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0.66614393599564,0,0,0,0.242721043499027,0.111443384277478,0,0,0,0,4.97073823883149,4.3607519087259,0,0,0,1.39473591775749,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,3.87733098438087,4.17456441728331,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,2.65722415744152,3.85908603601305,3.05163472634166,7.07707263559838,7.38869047383869,2.63262476584767,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,1.83309043480088,0,0,0.208843899010911,0.876214728748802,0,1.40558667435203,0,0,0,0,3.62972148145992,6.1214552326098,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.290967049465258,0,1.35588444468319,0,0,3.10222900183806,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.60120219894787,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,4.77137813885582,3.26888174667781,0.482259445395058,1.51293380256957,0.83088067605837,0,0,3.7057229561395,0,0.0788057072991982,0.104909176269996,0,0,0,4.2881719582402,0.662091970365432,0.25426853765475,0,0,0.653174720218818,0,0.164185041498678,1.36310417428337,0.113312091520126,0,0,3.74920573448497,2.77688463659649,0,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,7.08854543973589,4.02686674176478,2.754200475543,1.14681839138014,2.5513681853476,1.4903136705932,0.968440444553616,0.124980407962107,0,0,0,0.468334905806882,0.579684114443301,0.149254802886874,0.233713309847224,0,0,0.754703705257725,1.77962244319307,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,4.00949464840019,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0.383683113910955,0.539124056983409,0,0.218419276384028,0,0.212574920101683,0,0,0,0,1.60114149657094,0,0,2.50493977876192,11.3357261060468,3.3523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| ||
|short_description=p3@NAP1L3 | |||
}} | }} |
Latest revision as of 14:30, 16 September 2015
Short description: | p3@NAP1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NAP1L3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -6bp_to_uc004efq.2_5end |
EntrezGene: | NAP1L3 |
HGNC: | 7639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.34e-08 | 8 |
neuron | 5.09e-07 | 6 |
neuroblast | 5.09e-07 | 6 |
electrically signaling cell | 5.09e-07 | 6 |