FFCP PHASE1:Hg19::chr9:19789028..19789050,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10976 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-220bp_to_uc003zod.1_5end | |||
|cluster_id=chr9:19789028..19789050,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SLC24A2_5end | |||
|id=chr9:19789028..19789050,- | |||
|ontology_enrichment_celltype=CL:0000047!1.39e-10!8;CL:0000540!2.14e-08!6;CL:0000031!2.14e-08!6;CL:0000404!2.14e-08!6;CL:0002322!7.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.70e-12;6!CL:0000404;3.70e-12;6!CL:0002319;4.80e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.56e-15,8;CL:0000540,3.78e-12,6;CL:0000031,3.78e-12,6;CL:0000404,3.78e-12,6;CL:0002319,5.21e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-24;82!CL:0000031;3.70e-12;6!UBERON:0006241;4.94e-08;3!UBERON:0003057;4.94e-08;3!UBERON:0006215;1.44e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.18e-68!94;UBERON:0001016!8.18e-68!94;UBERON:0001017!1.20e-65!82;UBERON:0005743!7.85e-64!86;UBERON:0001049!5.28e-60!57;UBERON:0005068!5.28e-60!57;UBERON:0006241!5.28e-60!57;UBERON:0007135!5.28e-60!57;UBERON:0007023!4.53e-57!115;UBERON:0002346!6.36e-50!90;UBERON:0002616!1.45e-49!59;UBERON:0000955!1.92e-49!69;UBERON:0006238!1.92e-49!69;UBERON:0002780!1.02e-48!41;UBERON:0001890!1.02e-48!41;UBERON:0006240!1.02e-48!41;UBERON:0003080!3.02e-47!42;UBERON:0003075!4.35e-47!86;UBERON:0007284!4.35e-47!86;UBERON:0001893!5.50e-39!34;UBERON:0000924!9.08e-39!173;UBERON:0006601!9.08e-39!173;UBERON:0002020!9.79e-39!34;UBERON:0003528!9.79e-39!34;UBERON:0002791!1.71e-37!33;UBERON:0004121!2.78e-36!169;UBERON:0001869!6.69e-36!32;UBERON:0003056!3.07e-33!61;UBERON:0002619!1.97e-30!22;UBERON:0001950!9.61e-28!20;UBERON:0000956!5.49e-26!25;UBERON:0000203!5.49e-26!25;UBERON:0000033!1.94e-24!123;UBERON:0000153!1.67e-23!129;UBERON:0007811!1.67e-23!129;UBERON:0002308!2.20e-14!9;UBERON:0000125!2.20e-14!9;UBERON:0002420!3.75e-14!9;UBERON:0007245!3.75e-14!9;UBERON:0010009!3.75e-14!9;UBERON:0010011!3.75e-14!9;UBERON:0000454!3.75e-14!9;UBERON:0003076!1.72e-13!15;UBERON:0003057!1.72e-13!15;UBERON:0000025!1.88e-13!194;UBERON:0009663!1.22e-11!7;UBERON:0004732!4.52e-11!13;UBERON:0001894!4.72e-11!7;UBERON:0006222!4.72e-11!7;UBERON:0000200!2.90e-10!6;UBERON:0000483!3.39e-10!309;UBERON:0000922!6.54e-10!612;UBERON:0000119!6.69e-10!312;UBERON:0002298!8.62e-10!8;UBERON:0004733!1.15e-09!12;UBERON:0002028!1.15e-09!12;UBERON:0007277!1.15e-09!12;UBERON:0001871!1.92e-09!7;UBERON:0004111!6.13e-09!241;UBERON:0002021!7.15e-09!5;UBERON:0001872!1.14e-08!5;UBERON:0000349!3.00e-08!5;UBERON:0000064!4.70e-08!219;UBERON:0000468!1.20e-07!659;UBERON:0000475!3.75e-07!365;UBERON:0002050!4.09e-07!605;UBERON:0005423!4.09e-07!605;UBERON:0000369!4.57e-07!4;UBERON:0002435!4.57e-07!4;UBERON:0000204!4.57e-07!4;UBERON:0010082!4.57e-07!4;UBERON:0000923!9.21e-07!604;UBERON:0005291!9.21e-07!604;UBERON:0006598!9.21e-07!604;UBERON:0002532!9.21e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.31e-54;41!UBERON:0001890;5.31e-54;41!UBERON:0001893;2.02e-51;34!UBERON:0000073;6.39e-51;53!UBERON:0002616;6.39e-51;53!UBERON:0003528;1.56e-50;34!UBERON:0002020;1.56e-50;34!UBERON:0002791;8.20e-50;32!UBERON:0001869;8.31e-50;32!UBERON:0002619;1.10e-46;22!UBERON:0001950;1.70e-42;20!UBERON:0000956;1.67e-40;25!UBERON:0000203;1.67e-40;25!UBERON:0001017;3.83e-37;75!UBERON:0000955;2.00e-35;68!UBERON:0001016;1.47e-33;83!UBERON:0000125;2.01e-21;9!UBERON:0002308;2.01e-21;9!UBERON:0002420;4.60e-21;9!UBERON:0007245;4.60e-21;9!UBERON:0010009;4.60e-21;9!UBERON:0010011;4.60e-21;9!UBERON:0000454;4.60e-21;9!UBERON:0009663;3.64e-17;7!UBERON:0004732;5.47e-17;13!UBERON:0001894;2.89e-16;7!UBERON:0007023;4.93e-15;114!UBERON:0000200;4.99e-15;6!UBERON:0004733;8.75e-15;12!UBERON:0002028;8.75e-15;12!UBERON:0002298;1.69e-14;6!UBERON:0002021;6.85e-13;5!UBERON:0001872;1.44e-12;5!UBERON:0011216;6.12e-12;132!UBERON:0000349;6.36e-12;5!UBERON:0001871;7.90e-12;6!UBERON:0002784;1.71e-10;4!UBERON:0000369;4.26e-10;4!UBERON:0002435;4.26e-10;4!UBERON:0000204;4.26e-10;4!UBERON:0003296;2.91e-09;4!UBERON:0010133;2.91e-09;4!UBERON:0002680;3.36e-09;9!UBERON:0001895;3.36e-09;9!UBERON:0010314;2.35e-08;132!UBERON:0000988;2.44e-08;3!UBERON:0001870;2.65e-08;3!UBERON:0002240;4.94e-08;3!UBERON:0005174;4.94e-08;3!UBERON:0001137;4.94e-08;3!UBERON:0005383;7.20e-08;3!UBERON:0005382;7.20e-08;3!UBERON:0001896;7.72e-08;3!UBERON:0005290;7.72e-08;3!UBERON:0002050;2.84e-07;5!UBERON:0005423;2.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-104,81;UBERON:0001016,1.24e-102,89;UBERON:0001049,1.30e-96,56;UBERON:0005068,1.30e-96,56;UBERON:0006241,1.30e-96,56;UBERON:0007135,1.30e-96,56;UBERON:0000073,8.05e-90,53;UBERON:0002616,8.05e-90,53;UBERON:0000955,5.24e-79,68;UBERON:0006238,5.24e-79,68;UBERON:0002780,4.86e-76,41;UBERON:0001890,4.86e-76,41;UBERON:0003080,4.86e-76,41;UBERON:0006240,4.86e-76,41;UBERON:0002346,1.04e-74,86;UBERON:0003075,4.11e-70,82;UBERON:0007284,4.11e-70,82;UBERON:0001893,7.77e-61,34;UBERON:0003528,1.93e-60,34;UBERON:0002020,1.93e-60,34;UBERON:0004121,3.49e-58,171;UBERON:0000924,3.49e-58,171;UBERON:0006601,3.49e-58,171;UBERON:0010371,1.74e-56,104;UBERON:0002791,4.57e-56,32;UBERON:0001869,5.18e-56,32;UBERON:0003056,1.58e-53,61;UBERON:0007023,4.42e-49,114;UBERON:0002619,1.08e-46,22;UBERON:0001950,1.67e-42,20;UBERON:0010314,1.80e-41,132;UBERON:0000956,1.64e-40,25;UBERON:0000203,1.64e-40,25;UBERON:0011216,6.88e-35,223;UBERON:0000125,1.99e-21,9;UBERON:0002308,1.99e-21,9;UBERON:0002420,4.55e-21,9;UBERON:0007245,4.55e-21,9;UBERON:0010009,4.55e-21,9;UBERON:0010011,4.55e-21,9;UBERON:0000454,4.55e-21,9;UBERON:0003076,9.36e-21,15;UBERON:0003057,9.36e-21,15;UBERON:0000025,2.58e-20,192;UBERON:0009663,3.60e-17,7;UBERON:0004732,5.62e-17,13;UBERON:0001894,2.92e-16,7;UBERON:0006222,2.92e-16,7;UBERON:0000200,4.87e-15,6;UBERON:0004733,8.98e-15,12;UBERON:0002028,8.98e-15,12;UBERON:0007277,8.98e-15,12;UBERON:0002298,1.71e-14,6;UBERON:0004111,1.63e-13,240;UBERON:0002021,6.94e-13,5;UBERON:0001872,1.42e-12,5;UBERON:0000349,6.37e-12,5;UBERON:0001871,7.75e-12,6;UBERON:0000483,8.49e-11,306;UBERON:0000119,1.48e-10,309;UBERON:0002784,1.73e-10,4;UBERON:0000369,4.26e-10,4;UBERON:0002435,4.26e-10,4;UBERON:0000204,4.26e-10,4;UBERON:0010082,4.26e-10,4;UBERON:0000922,2.03e-09,592;UBERON:0003296,2.91e-09,4;UBERON:0010133,2.91e-09,4;UBERON:0002680,3.43e-09,9;UBERON:0001895,3.43e-09,9;UBERON:0010092,3.43e-09,9;UBERON:0000988,2.47e-08,3;UBERON:0001870,2.65e-08,3;UBERON:0002050,4.75e-08,564;UBERON:0002240,4.83e-08,3;UBERON:0005174,4.83e-08,3;UBERON:0001137,4.83e-08,3;UBERON:0005383,7.20e-08,3;UBERON:0005382,7.20e-08,3;UBERON:0001896,7.72e-08,3;UBERON:0005290,7.72e-08,3;UBERON:0010096,7.72e-08,3;UBERON:0000923,9.80e-08,560;UBERON:0010316,9.80e-08,560;UBERON:0005291,9.80e-08,560;UBERON:0006598,9.80e-08,560;UBERON:0010317,9.80e-08,560;UBERON:0002532,9.80e-08,560;UBERON:0005423,2.85e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.18009283054671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,19.581371786908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95157929807353,1.98794652482228,0.929551542956147,1.24393266018445,1.26160425437814,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.01637849688985,10.4111883086097,8.50617694055465,3.18280904135263,10.2070200264506,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0.307007349452259,0.551346289938122,0,0.580066775656914,0.340906509664404,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,20.8771006030923,62.1758820534466,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,165.755899582282,126.25738159828,17.9652418201075,0,0,0,0,0,0,1.37897349296586,0,0,125.775276785565,68.4987771392317,30.5163472634166,27.09191868315,69.1581428351301,93.8969499819002,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,192.969443723678,0.802577647298789,130.953825160465,0,0,0,0.394584402849391,0,8.26396456402323,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1068829652709,0,0,128.774158974257,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,159.111376508094,181.262721652999,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,69.1849830134094,92.4821127497598,2.08979093004525,3.57602535152808,2.9080823662043,0,0,95.4983030664148,0,0.551639951094387,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,94.1179922312088,102.215801147099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,93.9232270765005,93.9602239745116,131.074904449705,51.0334184164163,79.9798461580705,97.6155454238548,1.24513771442608,0,0,0,0,5.1516839638757,1.1593682288866,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,134.801975247937,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24366922344972,0,18.5573811389958,0.982886743728125,0,61.2215769892847,33.9583994069666,0,0,0,0,0,0,124.604696687131,120.442089876747,173.362370936066,252.498244380369,18.4012338241854,153.874886732885,81.5452010440848,391.188211510083,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,138.519586052327,117.161714792077,122.358583528701,154.607745252745,16.4092442705466,0,0,16.0042832367255,0,49.2845689008024,86.0886328880189,5.46269043812968,8.19583888864671,0,0,0,181.207308116233,146.541739498028,0,0,0.156986185701028,34.2511986016884,0,0,0,0,10.5785285381451,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,6.95888658802919,0.485710993059139,0,0,0,0,0.219881033490858,0,0,0,0,0,0,104.632412972266,107.827843318732,69.738195051261,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,167.133953954592,0,113.681771599209,11.3451179488498,0,0,0,0,0,0.327796715891087,0,0.713921808193872,0.26721740526556,0.18378979906969,0,0.227336094654718,0.535928260312357,168.321396210132,192.799104286573,0,0.714193294391221,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,2.81155321620593,1.62758471326295,0,0,0 | |||
|short_description=p1@SLC24A2 | |||
}} |
Latest revision as of 21:29, 16 September 2015
Short description: | p1@SLC24A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC24A2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -220bp_to_uc003zod.1_5end |
EntrezGene: | SLC24A2 |
HGNC: | 10976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.56e-15 | 8 |
neuron | 3.78e-12 | 6 |
neuroblast | 3.78e-12 | 6 |
electrically signaling cell | 3.78e-12 | 6 |
neural cell | 5.21e-07 | 25 |