FFCP PHASE1:Hg19::chr21:34398234..34398250,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:34398234..34398250,+ to FFCP PHASE1:Hg19::chr21:34398234..34398250,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10215 | |EntrezGene=10215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9398 | |HGNC=9398 | ||
|TSSclassifier=strong | |||
|UniProt=Q13516,C9J444 | |UniProt=Q13516,C9J444 | ||
|association_with_transcript=0bp_to_ENST00000333337,ENST00000430860,uc002yqx.1_5end | |||
|cluster_id=chr21:34398234..34398250,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_OLIG2_5end | |||
|id=chr21:34398234..34398250,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.24e-22!42;CL:0000860!9.65e-22!45;CL:0002194!3.29e-16!63;CL:0000576!3.29e-16!63;CL:0000040!3.29e-16!63;CL:0000559!3.29e-16!63;CL:0002009!2.21e-15!65;CL:0000766!2.82e-14!76;CL:0000839!1.55e-13!70;CL:0000557!3.35e-13!71;CL:0000763!2.99e-09!112;CL:0000049!2.99e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-37;33!CL:0002057;2.52e-37;33!CL:0000473;5.54e-25;39!CL:0000234;5.54e-25;39!CL:0000576;2.99e-16;48!CL:0000766;3.74e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.43e-30,42;CL:0002057,5.43e-30,42;CL:0000473,4.20e-25,48;CL:0000234,4.20e-25,48;CL:0002194,2.56e-18,59;CL:0000576,2.56e-18,59;CL:0000040,2.56e-18,59;CL:0000559,2.56e-18,59;CL:0002009,1.89e-17,61;CL:0000839,1.62e-15,66;CL:0000557,3.63e-15,67;CL:0000766,1.46e-13,72;CL:0000763,1.50e-08,108;CL:0000049,1.50e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.64e-23;42!UBERON:0006601;1.19e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-62!82;UBERON:0005743!1.90e-58!86;UBERON:0001049!1.18e-57!57;UBERON:0005068!1.18e-57!57;UBERON:0006241!1.18e-57!57;UBERON:0007135!1.18e-57!57;UBERON:0000073!6.91e-53!94;UBERON:0001016!6.91e-53!94;UBERON:0000955!1.59e-52!69;UBERON:0006238!1.59e-52!69;UBERON:0002616!1.15e-47!59;UBERON:0002780!1.12e-45!41;UBERON:0001890!1.12e-45!41;UBERON:0006240!1.12e-45!41;UBERON:0003080!2.93e-44!42;UBERON:0001893!1.88e-42!34;UBERON:0002020!4.05e-42!34;UBERON:0003528!4.05e-42!34;UBERON:0002791!4.95e-41!33;UBERON:0003075!6.96e-41!86;UBERON:0007284!6.96e-41!86;UBERON:0001869!1.31e-39!32;UBERON:0002346!3.60e-38!90;UBERON:0007023!8.39e-37!115;UBERON:0003056!1.28e-30!61;UBERON:0000956!2.36e-30!25;UBERON:0000203!2.36e-30!25;UBERON:0002619!9.44e-28!22;UBERON:0004121!1.03e-25!169;UBERON:0001950!3.19e-25!20;UBERON:0000924!1.39e-24!173;UBERON:0006601!1.39e-24!173;UBERON:0000033!2.35e-24!123;UBERON:0000153!3.34e-23!129;UBERON:0007811!3.34e-23!129;UBERON:0003076!5.01e-14!15;UBERON:0003057!5.01e-14!15;UBERON:0002308!4.37e-13!9;UBERON:0000125!4.37e-13!9;UBERON:0002420!4.50e-13!9;UBERON:0007245!4.50e-13!9;UBERON:0010009!4.50e-13!9;UBERON:0010011!4.50e-13!9;UBERON:0000454!4.50e-13!9;UBERON:0002390!4.80e-13!102;UBERON:0003061!4.80e-13!102;UBERON:0004732!8.48e-12!13;UBERON:0000922!8.77e-12!612;UBERON:0000923!5.25e-11!604;UBERON:0005291!5.25e-11!604;UBERON:0006598!5.25e-11!604;UBERON:0002532!5.25e-11!604;UBERON:0002050!6.32e-11!605;UBERON:0005423!6.32e-11!605;UBERON:0002193!8.97e-11!112;UBERON:0009663!1.32e-10!7;UBERON:0002371!1.36e-10!80;UBERON:0000062!1.38e-10!511;UBERON:0004733!1.86e-10!12;UBERON:0002028!1.86e-10!12;UBERON:0007277!1.86e-10!12;UBERON:0001474!6.34e-10!86;UBERON:0000480!1.01e-09!626;UBERON:0000467!2.23e-09!625;UBERON:0000200!3.60e-09!6;UBERON:0002298!5.18e-09!8;UBERON:0000025!6.21e-09!194;UBERON:0001871!8.05e-09!7;UBERON:0000468!1.25e-08!659;UBERON:0001872!4.14e-08!5;UBERON:0000349!6.15e-08!5;UBERON:0002021!6.33e-08!5;UBERON:0004765!9.23e-08!101;UBERON:0001434!9.23e-08!101;UBERON:0002680!5.96e-07!9;UBERON:0001895!5.96e-07!9;UBERON:0010092!5.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.89e-46;34!UBERON:0003528;9.56e-46;34!UBERON:0002020;9.56e-46;34!UBERON:0001869;2.07e-45;32!UBERON:0002791;2.72e-45;32!UBERON:0002780;1.33e-41;41!UBERON:0001890;1.33e-41;41!UBERON:0000073;6.95e-40;53!UBERON:0002616;6.95e-40;53!UBERON:0000956;3.71e-38;25!UBERON:0000203;3.71e-38;25!UBERON:0002619;1.82e-37;22!UBERON:0001950;5.28e-34;20!UBERON:0001017;3.54e-27;75!UBERON:0000955;2.16e-26;68!UBERON:0001016;3.73e-23;83!UBERON:0000125;2.81e-17;9!UBERON:0002308;2.81e-17;9!UBERON:0002420;2.97e-17;9!UBERON:0007245;2.97e-17;9!UBERON:0010009;2.97e-17;9!UBERON:0010011;2.97e-17;9!UBERON:0000454;2.97e-17;9!UBERON:0009663;6.81e-14;7!UBERON:0004732;1.39e-13;13!UBERON:0002298;5.15e-12;6!UBERON:0007023;5.61e-12;114!UBERON:0000200;6.66e-12;6!UBERON:0004733;8.05e-12;12!UBERON:0002028;8.05e-12;12!UBERON:0001872;1.77e-10;5!UBERON:0000349;2.94e-10;5!UBERON:0002021;3.21e-10;5!UBERON:0001871;5.74e-10;6!UBERON:0000369;2.07e-08;4!UBERON:0002435;2.07e-08;4!UBERON:0000204;2.07e-08;4!UBERON:0011216;2.84e-08;132!UBERON:0002784;7.04e-08;4!UBERON:0002680;2.82e-07;9!UBERON:0001895;2.82e-07;9!UBERON:0000988;6.73e-07;3!UBERON:0001894;7.44e-07;7!UBERON:0001896;9.27e-07;3!UBERON:0005290;9.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.67e-75,56;UBERON:0005068,1.67e-75,56;UBERON:0006241,1.67e-75,56;UBERON:0007135,1.67e-75,56;UBERON:0000073,3.90e-70,53;UBERON:0002616,3.90e-70,53;UBERON:0001017,4.66e-68,81;UBERON:0001016,3.31e-62,89;UBERON:0002780,1.76e-59,41;UBERON:0001890,1.76e-59,41;UBERON:0003080,1.76e-59,41;UBERON:0006240,1.76e-59,41;UBERON:0000955,8.13e-59,68;UBERON:0006238,8.13e-59,68;UBERON:0001893,1.48e-54,34;UBERON:0003528,4.12e-54,34;UBERON:0002020,4.12e-54,34;UBERON:0003075,3.96e-51,82;UBERON:0007284,3.96e-51,82;UBERON:0001869,1.08e-50,32;UBERON:0002791,1.34e-50,32;UBERON:0002346,5.22e-48,86;UBERON:0003056,1.24e-40,61;UBERON:0007023,3.26e-40,114;UBERON:0010371,3.89e-40,104;UBERON:0000956,4.04e-38,25;UBERON:0000203,4.04e-38,25;UBERON:0002619,1.80e-37,22;UBERON:0001950,5.14e-34,20;UBERON:0010314,2.34e-28,132;UBERON:0004121,2.12e-27,171;UBERON:0000924,2.12e-27,171;UBERON:0006601,2.12e-27,171;UBERON:0011216,1.48e-18,223;UBERON:0000125,3.00e-17,9;UBERON:0002308,3.00e-17,9;UBERON:0002420,3.12e-17,9;UBERON:0007245,3.12e-17,9;UBERON:0010009,3.12e-17,9;UBERON:0010011,3.12e-17,9;UBERON:0000454,3.12e-17,9;UBERON:0003076,1.47e-16,15;UBERON:0003057,1.47e-16,15;UBERON:0002390,1.20e-15,98;UBERON:0003061,1.20e-15,98;UBERON:0009663,7.14e-14,7;UBERON:0004732,1.38e-13,13;UBERON:0002193,2.92e-13,108;UBERON:0000923,6.89e-13,560;UBERON:0010316,6.89e-13,560;UBERON:0005291,6.89e-13,560;UBERON:0006598,6.89e-13,560;UBERON:0010317,6.89e-13,560;UBERON:0002532,6.89e-13,560;UBERON:0005423,1.06e-12,581;UBERON:0002050,1.29e-12,564;UBERON:0002371,1.94e-12,76;UBERON:0000025,2.82e-12,192;UBERON:0002298,5.11e-12,6;UBERON:0000922,5.57e-12,592;UBERON:0000200,6.42e-12,6;UBERON:0001474,6.93e-12,82;UBERON:0004733,8.00e-12,12;UBERON:0002028,8.00e-12,12;UBERON:0007277,8.00e-12,12;UBERON:0001872,1.77e-10,5;UBERON:0000349,3.03e-10,5;UBERON:0002021,3.15e-10,5;UBERON:0004765,3.89e-10,90;UBERON:0001871,5.69e-10,6;UBERON:0002405,1.53e-09,93;UBERON:0001434,3.13e-09,100;UBERON:0000369,2.20e-08,4;UBERON:0002435,2.20e-08,4;UBERON:0000204,2.20e-08,4;UBERON:0010082,2.20e-08,4;UBERON:0002784,7.10e-08,4;UBERON:0004111,2.80e-07,240;UBERON:0002680,2.86e-07,9;UBERON:0001895,2.86e-07,9;UBERON:0010092,2.86e-07,9;UBERON:0000988,6.87e-07,3;UBERON:0001894,7.48e-07,7;UBERON:0006222,7.48e-07,7;UBERON:0001896,9.01e-07,3;UBERON:0005290,9.01e-07,3;UBERON:0010096,9.01e-07,3 | |||
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| ||
|short_description=p1@OLIG2 | |||
}} | }} |
Latest revision as of 03:49, 18 September 2015
Short description: | p1@OLIG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OLIG2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000333337, ENST00000430860, uc002yqx.1_5end |
EntrezGene: | OLIG2 |
HGNC: | 9398 |
UniProt: | Q13516C9J444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.43e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.43e-30 | 42 |
defensive cell | 4.20e-25 | 48 |
phagocyte | 4.20e-25 | 48 |
monopoietic cell | 2.56e-18 | 59 |
monocyte | 2.56e-18 | 59 |
monoblast | 2.56e-18 | 59 |
promonocyte | 2.56e-18 | 59 |
macrophage dendritic cell progenitor | 1.89e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.62e-15 | 66 |
granulocyte monocyte progenitor cell | 3.63e-15 | 67 |
myeloid leukocyte | 1.46e-13 | 72 |
myeloid cell | 1.50e-08 | 108 |
common myeloid progenitor | 1.50e-08 | 108 |