FFCP PHASE1:Hg19::chrX:13835124..13835142,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:13835124..13835142,- to FFCP PHASE1:Hg19::chrX:13835124..13835142,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2824 | |EntrezGene=2824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |HGNC=4461 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z613 | |UniProt=B7Z613 | ||
|association_with_transcript=45bp_to_ENST00000355135,ENST00000493677_5end | |||
|cluster_id=chrX:13835124..13835142,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_GPM6B_5end | |||
|id=chrX:13835124..13835142,- | |||
|ontology_enrichment_celltype=CL:0000128!7.38e-08!7;CL:0000126!7.38e-08!7;CL:0000127!7.38e-08!7;CL:0002453!7.38e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.21e-08,8;CL:0002605,1.10e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.13e-20;82!UBERON:0006241;1.51e-08;3!UBERON:0003057;1.51e-08;3!UBERON:0006215;3.20e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.23e-83!57;UBERON:0005068!2.23e-83!57;UBERON:0006241!2.23e-83!57;UBERON:0007135!2.23e-83!57;UBERON:0007023!1.09e-79!115;UBERON:0001017!2.56e-79!82;UBERON:0005743!2.74e-77!86;UBERON:0000073!6.96e-73!94;UBERON:0001016!6.96e-73!94;UBERON:0002616!2.67e-70!59;UBERON:0000955!2.81e-67!69;UBERON:0006238!2.81e-67!69;UBERON:0002780!4.68e-65!41;UBERON:0001890!4.68e-65!41;UBERON:0006240!4.68e-65!41;UBERON:0003075!1.19e-64!86;UBERON:0007284!1.19e-64!86;UBERON:0003080!3.35e-63!42;UBERON:0002346!6.61e-61!90;UBERON:0001893!9.47e-55!34;UBERON:0002020!2.05e-54!34;UBERON:0003528!2.05e-54!34;UBERON:0002791!5.13e-53!33;UBERON:0001869!2.45e-51!32;UBERON:0003056!3.70e-46!61;UBERON:0004121!1.92e-44!169;UBERON:0000924!6.83e-43!173;UBERON:0006601!6.83e-43!173;UBERON:0000033!5.51e-42!123;UBERON:0000153!6.05e-42!129;UBERON:0007811!6.05e-42!129;UBERON:0000956!4.99e-40!25;UBERON:0000203!4.99e-40!25;UBERON:0002619!7.32e-36!22;UBERON:0001950!3.26e-32!20;UBERON:0003076!3.18e-20!15;UBERON:0003057!3.18e-20!15;UBERON:0000025!1.51e-18!194;UBERON:0004111!1.11e-17!241;UBERON:0004732!2.21e-17!13;UBERON:0002420!3.84e-16!9;UBERON:0007245!3.84e-16!9;UBERON:0010009!3.84e-16!9;UBERON:0010011!3.84e-16!9;UBERON:0000454!3.84e-16!9;UBERON:0004733!1.22e-15!12;UBERON:0002028!1.22e-15!12;UBERON:0007277!1.22e-15!12;UBERON:0000477!1.47e-15!286;UBERON:0002308!1.54e-15!9;UBERON:0000125!1.54e-15!9;UBERON:0000064!2.59e-13!219;UBERON:0000475!1.21e-12!365;UBERON:0009663!1.37e-12!7;UBERON:0000481!1.59e-12!347;UBERON:0000483!1.75e-12!309;UBERON:0000119!3.56e-12!312;UBERON:0000200!1.04e-11!6;UBERON:0001894!2.09e-11!7;UBERON:0006222!2.09e-11!7;UBERON:0001871!2.31e-11!7;UBERON:0002680!3.12e-11!9;UBERON:0001895!3.12e-11!9;UBERON:0010092!3.12e-11!9;UBERON:0000922!3.32e-11!612;UBERON:0002298!1.66e-10!8;UBERON:0000349!1.67e-10!5;UBERON:0000062!4.15e-10!511;UBERON:0001872!1.30e-09!5;UBERON:0000923!1.45e-09!604;UBERON:0005291!1.45e-09!604;UBERON:0006598!1.45e-09!604;UBERON:0002532!1.45e-09!604;UBERON:0002050!1.67e-09!605;UBERON:0005423!1.67e-09!605;UBERON:0002021!2.36e-09!5;UBERON:0000468!2.68e-09!659;UBERON:0000467!7.79e-09!625;UBERON:0000480!8.94e-09!626;UBERON:0000369!5.49e-08!4;UBERON:0002435!5.49e-08!4;UBERON:0000204!5.49e-08!4;UBERON:0010082!5.49e-08!4;UBERON:0002037!6.09e-07!6;UBERON:0006215!6.09e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.68e-69;34!UBERON:0003528;1.66e-68;34!UBERON:0002020;1.66e-68;34!UBERON:0001869;3.65e-68;32!UBERON:0002791;3.81e-68;32!UBERON:0002780;1.57e-64;41!UBERON:0001890;1.57e-64;41!UBERON:0000073;1.15e-62;53!UBERON:0002616;1.15e-62;53!UBERON:0000956;8.69e-59;25!UBERON:0000203;8.69e-59;25!UBERON:0002619;1.25e-52;22!UBERON:0001950;3.19e-47;20!UBERON:0000955;1.61e-41;68!UBERON:0001017;8.46e-40;75!UBERON:0001016;2.75e-34;83!UBERON:0002420;3.95e-23;9!UBERON:0007245;3.95e-23;9!UBERON:0010009;3.95e-23;9!UBERON:0010011;3.95e-23;9!UBERON:0000454;3.95e-23;9!UBERON:0000125;3.21e-22;9!UBERON:0002308;3.21e-22;9!UBERON:0004732;1.57e-21;13!UBERON:0004733;4.99e-19;12!UBERON:0002028;4.99e-19;12!UBERON:0007023;7.11e-19;114!UBERON:0009663;7.11e-18;7!UBERON:0000200;1.78e-16;6!UBERON:0002298;7.14e-15;6!UBERON:0000349;9.12e-15;5!UBERON:0011216;1.55e-14;132!UBERON:0001871;6.32e-14;6!UBERON:0001872;1.63e-13;5!UBERON:0002021;4.69e-13;5!UBERON:0002680;1.13e-12;9!UBERON:0001895;1.13e-12;9!UBERON:0001894;2.43e-12;7!UBERON:0000369;4.41e-11;4!UBERON:0002435;4.41e-11;4!UBERON:0000204;4.41e-11;4!UBERON:0002784;2.51e-10;4!UBERON:0010314;1.47e-09;132!UBERON:0001870;3.14e-09;3!UBERON:0005383;1.24e-08;3!UBERON:0005382;1.24e-08;3!UBERON:0002240;1.51e-08;3!UBERON:0005174;1.51e-08;3!UBERON:0001137;1.51e-08;3!UBERON:0001896;2.33e-08;3!UBERON:0005290;2.33e-08;3!UBERON:0000988;3.40e-08;3!UBERON:0001954;4.96e-07;2!UBERON:0003022;4.96e-07;2!UBERON:0002421;4.96e-07;2!UBERON:0002600;4.96e-07;2!UBERON:0001876;5.87e-07;2!UBERON:0005162;9.52e-07;2!UBERON:0000122;9.52e-07;2!UBERON:0002037;9.83e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.20e-117,56;UBERON:0005068,1.20e-117,56;UBERON:0006241,1.20e-117,56;UBERON:0007135,1.20e-117,56;UBERON:0000073,3.38e-110,53;UBERON:0002616,3.38e-110,53;UBERON:0001017,2.91e-108,81;UBERON:0001016,6.65e-100,89;UBERON:0000955,2.84e-93,68;UBERON:0006238,2.84e-93,68;UBERON:0002780,1.05e-91,41;UBERON:0001890,1.05e-91,41;UBERON:0003080,1.05e-91,41;UBERON:0006240,1.05e-91,41;UBERON:0003075,9.69e-90,82;UBERON:0007284,9.69e-90,82;UBERON:0002346,6.45e-85,86;UBERON:0001893,1.45e-80,34;UBERON:0003528,4.58e-80,34;UBERON:0002020,4.58e-80,34;UBERON:0001869,1.68e-75,32;UBERON:0002791,1.77e-75,32;UBERON:0010371,2.16e-70,104;UBERON:0003056,1.06e-68,61;UBERON:0007023,1.73e-61,114;UBERON:0000956,1.01e-58,25;UBERON:0000203,1.01e-58,25;UBERON:0010314,1.20e-54,132;UBERON:0004121,2.04e-54,171;UBERON:0000924,2.04e-54,171;UBERON:0006601,2.04e-54,171;UBERON:0002619,1.53e-52,22;UBERON:0001950,3.95e-47,20;UBERON:0011216,1.05e-40,223;UBERON:0000025,4.68e-27,192;UBERON:0003076,1.26e-25,15;UBERON:0003057,1.26e-25,15;UBERON:0002420,4.45e-23,9;UBERON:0007245,4.45e-23,9;UBERON:0010009,4.45e-23,9;UBERON:0010011,4.45e-23,9;UBERON:0000454,4.45e-23,9;UBERON:0000125,3.47e-22,9;UBERON:0002308,3.47e-22,9;UBERON:0004111,9.19e-22,240;UBERON:0004732,1.76e-21,13;UBERON:0004733,5.53e-19,12;UBERON:0002028,5.53e-19,12;UBERON:0007277,5.53e-19,12;UBERON:0009663,7.88e-18,7;UBERON:0000200,1.58e-16,6;UBERON:0000483,7.97e-16,306;UBERON:0000119,1.58e-15,309;UBERON:0002298,7.70e-15,6;UBERON:0000349,9.51e-15,5;UBERON:0001871,6.76e-14,6;UBERON:0001872,1.96e-13,5;UBERON:0002021,4.69e-13,5;UBERON:0002680,1.14e-12,9;UBERON:0001895,1.14e-12,9;UBERON:0010092,1.14e-12,9;UBERON:0001894,2.19e-12,7;UBERON:0006222,2.19e-12,7;UBERON:0000369,4.83e-11,4;UBERON:0002435,4.83e-11,4;UBERON:0000204,4.83e-11,4;UBERON:0010082,4.83e-11,4;UBERON:0000923,5.61e-11,560;UBERON:0010316,5.61e-11,560;UBERON:0005291,5.61e-11,560;UBERON:0006598,5.61e-11,560;UBERON:0010317,5.61e-11,560;UBERON:0002532,5.61e-11,560;UBERON:0002050,8.94e-11,564;UBERON:0000922,1.05e-10,592;UBERON:0002784,2.45e-10,4;UBERON:0005423,6.04e-10,581;UBERON:0001870,2.90e-09,3;UBERON:0005383,1.31e-08,3;UBERON:0005382,1.31e-08,3;UBERON:0002240,1.57e-08,3;UBERON:0005174,1.57e-08,3;UBERON:0001137,1.57e-08,3;UBERON:0001896,2.61e-08,3;UBERON:0005290,2.61e-08,3;UBERON:0010096,2.61e-08,3;UBERON:0000988,3.28e-08,3;UBERON:0001954,4.89e-07,2;UBERON:0003022,4.89e-07,2;UBERON:0002421,4.89e-07,2;UBERON:0002600,4.89e-07,2;UBERON:0001876,5.95e-07,2;UBERON:0005162,9.79e-07,2;UBERON:0000122,9.79e-07,2 | |||
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|short_description=p5@GPM6B | |||
}} | }} |
Latest revision as of 16:53, 19 September 2015
Short description: | p5@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPM6B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 45bp_to_ENST00000355135, ENST00000493677_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | B7Z613 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.21e-08 | 8 |
astrocyte of the cerebral cortex | 1.10e-07 | 3 |