FFCP PHASE1:Hg19::chrX:13835312..13835321,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:13835312..13835321,-
|short_description=p9@GPM6B
|description=CAGE_peak_9_at_GPM6B_5end
|association_with_transcript=0bp_to_NM_001001995,NM_001001996,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2824 | |EntrezGene=2824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |HGNC=4461 | ||
|TSSclassifier=strong | |||
|UniProt=Q13491,Q8N956 | |UniProt=Q13491,Q8N956 | ||
|association_with_transcript=0bp_to_NM_001001995,NM_001001996,NM_005278,uc004cvw.2,uc004cvy.2,uc004cvz.2,uc011mim.1_5end | |||
|cluster_id=chrX:13835312..13835321,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_GPM6B_5end | |||
|id=chrX:13835312..13835321,- | |||
|ontology_enrichment_celltype=CL:0000128!1.60e-15!7;CL:0000126!1.60e-15!7;CL:0000127!1.60e-15!7;CL:0002453!1.60e-15!7;CL:0002319!8.19e-10!25;CL:0002605!3.07e-08!3;CL:0000133!1.23e-07!59;CL:0002322!2.38e-07!5;CL:0002603!4.53e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.36e-11;3!CL:0000047;7.22e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.86e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.10e-21;82!UBERON:0006241;7.50e-11;3!UBERON:0003057;7.50e-11;3!UBERON:0010122;4.73e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p9@GPM6B | |||
}} | }} |
Latest revision as of 16:55, 19 September 2015
Short description: | p9@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GPM6B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001001995, NM_001001996, NM_005278, uc004cvw.2, uc004cvy.2, uc004cvz.2, uc011mim.1_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | Q13491Q8N956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.86e-11 | 3 |