FFCP PHASE1:Hg19::chrX:13835312..13835321,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |||
|TSSclassifier=strong | |||
|UniProt=Q13491,Q8N956 | |||
|association_with_transcript=0bp_to_NM_001001995,NM_001001996,NM_005278,uc004cvw.2,uc004cvy.2,uc004cvz.2,uc011mim.1_5end | |||
|cluster_id=chrX:13835312..13835321,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_GPM6B_5end | |||
|id=chrX:13835312..13835321,- | |||
|ontology_enrichment_celltype=CL:0000128!1.60e-15!7;CL:0000126!1.60e-15!7;CL:0000127!1.60e-15!7;CL:0002453!1.60e-15!7;CL:0002319!8.19e-10!25;CL:0002605!3.07e-08!3;CL:0000133!1.23e-07!59;CL:0002322!2.38e-07!5;CL:0002603!4.53e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.36e-11;3!CL:0000047;7.22e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.86e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.10e-21;82!UBERON:0006241;7.50e-11;3!UBERON:0003057;7.50e-11;3!UBERON:0010122;4.73e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.48e-116!57;UBERON:0005068!2.48e-116!57;UBERON:0006241!2.48e-116!57;UBERON:0007135!2.48e-116!57;UBERON:0001017!4.23e-106!82;UBERON:0005743!9.52e-104!86;UBERON:0002616!4.94e-99!59;UBERON:0000073!1.44e-95!94;UBERON:0001016!1.44e-95!94;UBERON:0000955!2.64e-92!69;UBERON:0006238!2.64e-92!69;UBERON:0003075!1.07e-90!86;UBERON:0007284!1.07e-90!86;UBERON:0002780!1.88e-90!41;UBERON:0001890!1.88e-90!41;UBERON:0006240!1.88e-90!41;UBERON:0003080!4.62e-88!42;UBERON:0002346!5.32e-86!90;UBERON:0001893!4.93e-79!34;UBERON:0002020!6.98e-79!34;UBERON:0003528!6.98e-79!34;UBERON:0002791!1.28e-76!33;UBERON:0001869!7.10e-75!32;UBERON:0003056!1.39e-69!61;UBERON:0000956!1.63e-57!25;UBERON:0000203!1.63e-57!25;UBERON:0000033!3.08e-56!123;UBERON:0004121!1.89e-55!169;UBERON:0000924!8.57e-54!173;UBERON:0006601!8.57e-54!173;UBERON:0007023!4.91e-53!115;UBERON:0000153!6.21e-53!129;UBERON:0007811!6.21e-53!129;UBERON:0002619!8.86e-51!22;UBERON:0001950!7.13e-46!20;UBERON:0003076!1.36e-27!15;UBERON:0003057!1.36e-27!15;UBERON:0000025!2.95e-25!194;UBERON:0002420!5.15e-23!9;UBERON:0007245!5.15e-23!9;UBERON:0010009!5.15e-23!9;UBERON:0010011!5.15e-23!9;UBERON:0000454!5.15e-23!9;UBERON:0002308!3.14e-22!9;UBERON:0000125!3.14e-22!9;UBERON:0004733!2.78e-21!12;UBERON:0002028!2.78e-21!12;UBERON:0007277!2.78e-21!12;UBERON:0004732!1.88e-19!13;UBERON:0004111!1.91e-18!241;UBERON:0009663!3.94e-18!7;UBERON:0000483!2.53e-17!309;UBERON:0000119!5.28e-17!312;UBERON:0000477!1.06e-15!286;UBERON:0000200!1.08e-15!6;UBERON:0001871!1.85e-15!7;UBERON:0000064!2.04e-15!219;UBERON:0002680!5.44e-15!9;UBERON:0001895!5.44e-15!9;UBERON:0010092!5.44e-15!9;UBERON:0002298!4.67e-14!8;UBERON:0000349!6.16e-14!5;UBERON:0001872!1.59e-13!5;UBERON:0002021!4.13e-13!5;UBERON:0001894!1.35e-12!7;UBERON:0006222!1.35e-12!7;UBERON:0000475!2.55e-12!365;UBERON:0000369!7.60e-12!4;UBERON:0002435!7.60e-12!4;UBERON:0000204!7.60e-12!4;UBERON:0010082!7.60e-12!4;UBERON:0000922!3.12e-10!612;UBERON:0005383!2.57e-09!3;UBERON:0005382!2.57e-09!3;UBERON:0000062!3.14e-09!511;UBERON:0002037!4.79e-09!6;UBERON:0006215!4.79e-09!6;UBERON:0002771!9.44e-09!3;UBERON:0000468!3.76e-08!659;UBERON:0001896!4.23e-08!3;UBERON:0005290!4.23e-08!3;UBERON:0010096!4.23e-08!3;UBERON:0002240!4.89e-08!3;UBERON:0000481!7.92e-08!347;UBERON:0000988!8.12e-08!3;UBERON:0006331!8.72e-08!3;UBERON:0000923!1.22e-07!604;UBERON:0005291!1.22e-07!604;UBERON:0006598!1.22e-07!604;UBERON:0002532!1.22e-07!604;UBERON:0002050!1.34e-07!605;UBERON:0005423!1.34e-07!605;UBERON:0000467!2.70e-07!625;UBERON:0000480!2.97e-07!626;UBERON:0001873!9.27e-07!2;UBERON:0010122!9.27e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.37e-91;34!UBERON:0002020;1.37e-91;34!UBERON:0001893;2.91e-91;34!UBERON:0001869;2.69e-90;32!UBERON:0002791;5.19e-90;32!UBERON:0002780;1.90e-81;41!UBERON:0001890;1.90e-81;41!UBERON:0000956;6.67e-76;25!UBERON:0000203;6.67e-76;25!UBERON:0000073;4.94e-71;53!UBERON:0002616;4.94e-71;53!UBERON:0002619;2.76e-66;22!UBERON:0001950;2.47e-59;20!UBERON:0000955;2.22e-47;68!UBERON:0001017;5.53e-45;75!UBERON:0001016;3.18e-37;83!UBERON:0002420;2.28e-32;9!UBERON:0007245;2.28e-32;9!UBERON:0010009;2.28e-32;9!UBERON:0010011;2.28e-32;9!UBERON:0000454;2.28e-32;9!UBERON:0000125;2.62e-31;9!UBERON:0002308;2.62e-31;9!UBERON:0009663;2.14e-25;7!UBERON:0000200;7.28e-22;6!UBERON:0002298;9.61e-20;6!UBERON:0000349;3.36e-19;5!UBERON:0001872;1.17e-18;5!UBERON:0002021;3.79e-18;5!UBERON:0000369;2.47e-16;4!UBERON:0002435;2.47e-16;4!UBERON:0000204;2.47e-16;4!UBERON:0007023;3.98e-16;114!UBERON:0002784;2.07e-14;4!UBERON:0011216;3.10e-14;132!UBERON:0001871;2.31e-13;6!UBERON:0004733;7.31e-13;12!UBERON:0002028;7.31e-13;12!UBERON:0001894;9.41e-13;7!UBERON:0005383;1.06e-12;3!UBERON:0005382;1.06e-12;3!UBERON:0001870;7.80e-12;3!UBERON:0004732;8.41e-12;13!UBERON:0001896;7.50e-11;3!UBERON:0002240;7.50e-11;3!UBERON:0005174;7.50e-11;3!UBERON:0005290;7.50e-11;3!UBERON:0001137;7.50e-11;3!UBERON:0000988;1.28e-10;3!UBERON:0010314;1.97e-10;132!UBERON:0001873;4.73e-09;2!UBERON:0001876;1.09e-08;2!UBERON:0001954;1.39e-08;2!UBERON:0003022;1.39e-08;2!UBERON:0002421;1.39e-08;2!UBERON:0002600;1.39e-08;2!UBERON:0002771;1.61e-08;2!UBERON:0002702;3.00e-08;2!UBERON:0001897;3.11e-08;2!UBERON:0010225;3.11e-08;2!UBERON:0001905;7.22e-08;2!UBERON:0001875;7.22e-08;2!UBERON:0002757;7.22e-08;2!UBERON:0010134;7.22e-08;2!UBERON:0005408;7.22e-08;2!UBERON:0006514;7.22e-08;2!UBERON:0001899;7.22e-08;2!UBERON:0002148;1.24e-07;2!UBERON:0006331;1.24e-07;2!UBERON:0009662;1.24e-07;2!UBERON:0004121;3.18e-07;165 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.26e-136,56;UBERON:0005068,4.26e-136,56;UBERON:0006241,4.26e-136,56;UBERON:0007135,4.26e-136,56;UBERON:0000073,2.47e-126,53;UBERON:0002616,2.47e-126,53;UBERON:0002780,8.87e-118,41;UBERON:0001890,8.87e-118,41;UBERON:0003080,8.87e-118,41;UBERON:0006240,8.87e-118,41;UBERON:0001017,2.57e-116,81;UBERON:0001893,5.32e-107,34;UBERON:0003528,8.66e-107,34;UBERON:0002020,8.66e-107,34;UBERON:0000955,1.82e-104,68;UBERON:0006238,1.82e-104,68;UBERON:0001016,7.19e-104,89;UBERON:0001869,5.28e-101,32;UBERON:0002791,1.50e-100,32;UBERON:0003075,3.86e-94,82;UBERON:0007284,3.86e-94,82;UBERON:0002346,2.55e-89,86;UBERON:0003056,5.89e-81,61;UBERON:0000956,4.08e-76,25;UBERON:0000203,4.08e-76,25;UBERON:0010371,3.59e-72,104;UBERON:0002619,1.90e-66,22;UBERON:0001950,1.95e-59,20;UBERON:0010314,1.82e-57,132;UBERON:0007023,9.46e-55,114;UBERON:0004121,7.06e-52,171;UBERON:0000924,7.06e-52,171;UBERON:0006601,7.06e-52,171;UBERON:0011216,5.45e-39,223;UBERON:0000025,1.15e-32,192;UBERON:0002420,2.30e-32,9;UBERON:0007245,2.30e-32,9;UBERON:0010009,2.30e-32,9;UBERON:0010011,2.30e-32,9;UBERON:0000454,2.30e-32,9;UBERON:0000125,3.10e-31,9;UBERON:0002308,3.10e-31,9;UBERON:0009663,2.44e-25,7;UBERON:0004111,5.16e-24,240;UBERON:0000200,7.85e-22,6;UBERON:0003076,1.56e-20,15;UBERON:0003057,1.56e-20,15;UBERON:0002298,9.48e-20,6;UBERON:0000349,2.60e-19,5;UBERON:0001872,1.02e-18,5;UBERON:0000483,1.41e-18,306;UBERON:0000119,2.72e-18,309;UBERON:0002021,4.01e-18,5;UBERON:0000369,2.62e-16,4;UBERON:0002435,2.62e-16,4;UBERON:0000204,2.62e-16,4;UBERON:0010082,2.62e-16,4;UBERON:0002784,2.26e-14,4;UBERON:0001871,2.23e-13,6;UBERON:0004733,8.07e-13,12;UBERON:0002028,8.07e-13,12;UBERON:0007277,8.07e-13,12;UBERON:0001894,1.02e-12,7;UBERON:0006222,1.02e-12,7;UBERON:0005383,1.11e-12,3;UBERON:0005382,1.11e-12,3;UBERON:0001870,7.67e-12,3;UBERON:0004732,9.21e-12,13;UBERON:0001896,6.09e-11,3;UBERON:0005290,6.09e-11,3;UBERON:0010096,6.09e-11,3;UBERON:0002240,7.51e-11,3;UBERON:0005174,7.51e-11,3;UBERON:0001137,7.51e-11,3;UBERON:0000988,1.55e-10,3;UBERON:0000923,1.80e-09,560;UBERON:0010316,1.80e-09,560;UBERON:0005291,1.80e-09,560;UBERON:0006598,1.80e-09,560;UBERON:0010317,1.80e-09,560;UBERON:0002532,1.80e-09,560;UBERON:0002050,2.54e-09,564;UBERON:0001873,5.02e-09,2;UBERON:0010122,5.02e-09,2;UBERON:0001876,9.57e-09,2;UBERON:0005423,1.05e-08,581;UBERON:0001954,1.20e-08,2;UBERON:0003022,1.20e-08,2;UBERON:0002421,1.20e-08,2;UBERON:0002600,1.20e-08,2;UBERON:0002771,1.55e-08,2;UBERON:0001897,2.17e-08,2;UBERON:0010225,2.17e-08,2;UBERON:0000922,2.51e-08,592;UBERON:0002702,2.80e-08,2;UBERON:0001875,5.95e-08,2;UBERON:0006514,5.95e-08,2;UBERON:0001905,1.12e-07,2;UBERON:0002757,1.12e-07,2;UBERON:0010134,1.12e-07,2;UBERON:0005408,1.12e-07,2;UBERON:0001899,1.12e-07,2;UBERON:0002148,1.29e-07,2;UBERON:0006331,1.29e-07,2;UBERON:0009662,1.29e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,2.0036519099174,1.64249310087461,2.88748071068046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.348581828608555,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.507095264676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,2.60279707715243,1.54657762555539,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,3.51673541026282,0,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,0,0,0,0,0,1.93866549219044,4.08179631912146,0,0,0,0,0,0,0,0,0,0,9.74315524395223,6.51220768577203,0,0.331737779793674,1.18219047581419,4.60709334023342,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0,0,0,0,0,0,1.01101699471016,0,5.15381780595746,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,5.00155288051442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,2.72406812223151,0,0,0,0,0,4.85996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,4.51497180137264,3.3801551290755,2.29363678276028,1.33114861844223,1.80079568530012,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,6.87252708532117,4.25089728976755,2.39450788585727,4.51256001329661,1.51243017733031,3.38870537074668,5.16722066021924,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,3.37687923091973,4.68646859168308,4.96048311602842,3.55128537085878,2.18789923607288,0,0,0,0,1.07140367175657,2.01770233331294,0,0.455324382702595,0,0,0,1.22345519358297,4.20945750802234,0,0,0,6.91308595630408,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,2.1593931382644,1.78227840196252,1.2679671827502,0,0,0,0,0,0,0,0,0,1.14671666521161,0,3.26359152916391,0.872701380680755,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,5.80418607621146,1.86179392551411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@GPM6B | |||
}} |
Latest revision as of 16:55, 19 September 2015
Short description: | p9@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GPM6B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001001995, NM_001001996, NM_005278, uc004cvw.2, uc004cvy.2, uc004cvz.2, uc011mim.1_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | Q13491Q8N956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.86e-11 | 3 |