FFCP PHASE1:Hg19::chrX:13835398..13835429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2824 | |EntrezGene=2824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |HGNC=4461 | ||
|TSSclassifier=strong | |||
|UniProt=C9J028 | |UniProt=C9J028 | ||
|association_with_transcript=12bp_to_ENST00000475307_5end | |association_with_transcript=12bp_to_ENST00000475307_5end | ||
|cluster_id=chrX:13835398..13835429,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_GPM6B_5end | |description=CAGE_peak_6_at_GPM6B_5end | ||
|id=chrX:13835398..13835429,- | |id=chrX:13835398..13835429,- | ||
|ontology_enrichment_celltype=CL:0000128!1.25e-10!7;CL:0000126!1.25e-10!7;CL:0000127!1.25e-10!7;CL:0002453!1.25e-10!7;CL:0002605!1.07e-07!3;CL:0002319!1.95e-07!25;CL:0000047!8.92e-07!8 | |ontology_enrichment_celltype=CL:0000128!1.25e-10!7;CL:0000126!1.25e-10!7;CL:0000127!1.25e-10!7;CL:0002453!1.25e-10!7;CL:0002605!1.07e-07!3;CL:0002319!1.95e-07!25;CL:0000047!8.92e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;6.89e-10;3!CL:0002319;3.31e-07;25!CL:0000128;5.64e-07;7!CL:0000126;5.64e-07;7!CL:0000127;5.64e-07;7!CL:0000047;8.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.69e-10,3;CL:0000047,5.65e-09,8;CL:0002319,3.20e-07,25;CL:0000128,5.50e-07,7;CL:0000126,5.50e-07,7;CL:0000127,5.50e-07,7;CL:0002453,5.50e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.42e-21;82!UBERON:0006241;3.39e-09;3!UBERON:0003057;3.39e-09;3!UBERON:0010122;6.69e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.06e-108!57;UBERON:0005068!8.06e-108!57;UBERON:0006241!8.06e-108!57;UBERON:0007135!8.06e-108!57;UBERON:0001017!2.18e-104!82;UBERON:0005743!5.50e-102!86;UBERON:0000073!9.58e-94!94;UBERON:0001016!9.58e-94!94;UBERON:0002616!5.80e-92!59;UBERON:0000955!1.21e-88!69;UBERON:0006238!1.21e-88!69;UBERON:0003080!9.27e-87!42;UBERON:0003075!3.82e-86!86;UBERON:0007284!3.82e-86!86;UBERON:0002780!5.43e-85!41;UBERON:0001890!5.43e-85!41;UBERON:0006240!5.43e-85!41;UBERON:0002346!1.42e-81!90;UBERON:0001893!3.19e-71!34;UBERON:0007023!4.83e-71!115;UBERON:0002020!9.26e-71!34;UBERON:0003528!9.26e-71!34;UBERON:0002791!6.11e-69!33;UBERON:0001869!3.26e-67!32;UBERON:0003056!8.56e-65!61;UBERON:0004121!6.54e-53!169;UBERON:0000956!1.96e-51!25;UBERON:0000203!1.96e-51!25;UBERON:0000924!2.88e-51!173;UBERON:0006601!2.88e-51!173;UBERON:0000033!6.62e-51!123;UBERON:0000153!8.72e-48!129;UBERON:0007811!8.72e-48!129;UBERON:0002619!2.93e-45!22;UBERON:0001950!6.04e-41!20;UBERON:0000025!4.36e-26!194;UBERON:0003076!2.63e-21!15;UBERON:0003057!2.63e-21!15;UBERON:0002420!6.19e-21!9;UBERON:0007245!6.19e-21!9;UBERON:0010009!6.19e-21!9;UBERON:0010011!6.19e-21!9;UBERON:0000454!6.19e-21!9;UBERON:0002308!2.69e-20!9;UBERON:0000125!2.69e-20!9;UBERON:0004111!7.19e-18!241;UBERON:0004732!1.25e-17!13;UBERON:0009663!1.17e-16!7;UBERON:0002298!2.15e-16!8;UBERON:0004733!5.93e-16!12;UBERON:0002028!5.93e-16!12;UBERON:0007277!5.93e-16!12;UBERON:0000483!2.27e-15!309;UBERON:0000119!4.65e-15!312;UBERON:0000477!8.78e-15!286;UBERON:0001894!1.18e-14!7;UBERON:0006222!1.18e-14!7;UBERON:0000064!1.55e-14!219;UBERON:0000200!2.62e-14!6;UBERON:0001871!5.38e-14!7;UBERON:0000349!1.68e-12!5;UBERON:0002021!4.47e-12!5;UBERON:0001872!8.95e-12!5;UBERON:0000475!4.21e-11!365;UBERON:0000369!7.80e-11!4;UBERON:0002435!7.80e-11!4;UBERON:0000204!7.80e-11!4;UBERON:0010082!7.80e-11!4;UBERON:0002680!1.27e-10!9;UBERON:0001895!1.27e-10!9;UBERON:0010092!1.27e-10!9;UBERON:0000062!5.95e-10!511;UBERON:0000922!1.03e-09!612;UBERON:0005383!1.54e-08!3;UBERON:0005382!1.54e-08!3;UBERON:0000481!1.74e-08!347;UBERON:0003296!1.89e-08!4;UBERON:0010133!1.89e-08!4;UBERON:0002050!2.24e-08!605;UBERON:0005423!2.24e-08!605;UBERON:0002771!5.31e-08!3;UBERON:0000923!6.77e-08!604;UBERON:0005291!6.77e-08!604;UBERON:0006598!6.77e-08!604;UBERON:0002532!6.77e-08!604;UBERON:0000468!1.76e-07!659;UBERON:0000467!1.90e-07!625;UBERON:0000480!2.11e-07!626;UBERON:0001896!2.71e-07!3;UBERON:0005290!2.71e-07!3;UBERON:0010096!2.71e-07!3;UBERON:0000988!3.16e-07!3;UBERON:0006331!3.23e-07!3;UBERON:0002240!3.67e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!8.06e-108!57;UBERON:0005068!8.06e-108!57;UBERON:0006241!8.06e-108!57;UBERON:0007135!8.06e-108!57;UBERON:0001017!2.18e-104!82;UBERON:0005743!5.50e-102!86;UBERON:0000073!9.58e-94!94;UBERON:0001016!9.58e-94!94;UBERON:0002616!5.80e-92!59;UBERON:0000955!1.21e-88!69;UBERON:0006238!1.21e-88!69;UBERON:0003080!9.27e-87!42;UBERON:0003075!3.82e-86!86;UBERON:0007284!3.82e-86!86;UBERON:0002780!5.43e-85!41;UBERON:0001890!5.43e-85!41;UBERON:0006240!5.43e-85!41;UBERON:0002346!1.42e-81!90;UBERON:0001893!3.19e-71!34;UBERON:0007023!4.83e-71!115;UBERON:0002020!9.26e-71!34;UBERON:0003528!9.26e-71!34;UBERON:0002791!6.11e-69!33;UBERON:0001869!3.26e-67!32;UBERON:0003056!8.56e-65!61;UBERON:0004121!6.54e-53!169;UBERON:0000956!1.96e-51!25;UBERON:0000203!1.96e-51!25;UBERON:0000924!2.88e-51!173;UBERON:0006601!2.88e-51!173;UBERON:0000033!6.62e-51!123;UBERON:0000153!8.72e-48!129;UBERON:0007811!8.72e-48!129;UBERON:0002619!2.93e-45!22;UBERON:0001950!6.04e-41!20;UBERON:0000025!4.36e-26!194;UBERON:0003076!2.63e-21!15;UBERON:0003057!2.63e-21!15;UBERON:0002420!6.19e-21!9;UBERON:0007245!6.19e-21!9;UBERON:0010009!6.19e-21!9;UBERON:0010011!6.19e-21!9;UBERON:0000454!6.19e-21!9;UBERON:0002308!2.69e-20!9;UBERON:0000125!2.69e-20!9;UBERON:0004111!7.19e-18!241;UBERON:0004732!1.25e-17!13;UBERON:0009663!1.17e-16!7;UBERON:0002298!2.15e-16!8;UBERON:0004733!5.93e-16!12;UBERON:0002028!5.93e-16!12;UBERON:0007277!5.93e-16!12;UBERON:0000483!2.27e-15!309;UBERON:0000119!4.65e-15!312;UBERON:0000477!8.78e-15!286;UBERON:0001894!1.18e-14!7;UBERON:0006222!1.18e-14!7;UBERON:0000064!1.55e-14!219;UBERON:0000200!2.62e-14!6;UBERON:0001871!5.38e-14!7;UBERON:0000349!1.68e-12!5;UBERON:0002021!4.47e-12!5;UBERON:0001872!8.95e-12!5;UBERON:0000475!4.21e-11!365;UBERON:0000369!7.80e-11!4;UBERON:0002435!7.80e-11!4;UBERON:0000204!7.80e-11!4;UBERON:0010082!7.80e-11!4;UBERON:0002680!1.27e-10!9;UBERON:0001895!1.27e-10!9;UBERON:0010092!1.27e-10!9;UBERON:0000062!5.95e-10!511;UBERON:0000922!1.03e-09!612;UBERON:0005383!1.54e-08!3;UBERON:0005382!1.54e-08!3;UBERON:0000481!1.74e-08!347;UBERON:0003296!1.89e-08!4;UBERON:0010133!1.89e-08!4;UBERON:0002050!2.24e-08!605;UBERON:0005423!2.24e-08!605;UBERON:0002771!5.31e-08!3;UBERON:0000923!6.77e-08!604;UBERON:0005291!6.77e-08!604;UBERON:0006598!6.77e-08!604;UBERON:0002532!6.77e-08!604;UBERON:0000468!1.76e-07!659;UBERON:0000467!1.90e-07!625;UBERON:0000480!2.11e-07!626;UBERON:0001896!2.71e-07!3;UBERON:0005290!2.71e-07!3;UBERON:0010096!2.71e-07!3;UBERON:0000988!3.16e-07!3;UBERON:0006331!3.23e-07!3;UBERON:0002240!3.67e-07!3 | ||
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|short_description=p6@GPM6B | |short_description=p6@GPM6B | ||
}} | }} |
Latest revision as of 16:58, 19 September 2015
Short description: | p6@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPM6B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 12bp_to_ENST00000475307_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | C9J028 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.69e-10 | 3 |
neuronal stem cell | 5.65e-09 | 8 |
neural cell | 3.20e-07 | 25 |
oligodendrocyte | 5.50e-07 | 7 |
macroglial cell | 5.50e-07 | 7 |
astrocyte | 5.50e-07 | 7 |
oligodendrocyte precursor cell | 5.50e-07 | 7 |