FFCP PHASE1:Hg19::chr7:29519631..29519657,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000493906_5end | |||
|cluster_id=chr7:29519631..29519657,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_CHN2_5end | |||
|id=chr7:29519631..29519657,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.74e-22;82!UBERON:0006241;2.59e-11;3!UBERON:0003057;2.59e-11;3!UBERON:0010122;2.23e-07;2!UBERON:0002532;3.43e-07;206!UBERON:0010316;3.43e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.85e-79!115;UBERON:0001049!2.21e-67!57;UBERON:0005068!2.21e-67!57;UBERON:0006241!2.21e-67!57;UBERON:0007135!2.21e-67!57;UBERON:0005743!2.25e-59!86;UBERON:0000073!4.84e-59!94;UBERON:0001016!4.84e-59!94;UBERON:0001017!4.45e-58!82;UBERON:0002616!3.83e-55!59;UBERON:0000955!1.18e-54!69;UBERON:0006238!1.18e-54!69;UBERON:0002780!4.11e-53!41;UBERON:0001890!4.11e-53!41;UBERON:0006240!4.11e-53!41;UBERON:0003075!1.43e-52!86;UBERON:0007284!1.43e-52!86;UBERON:0003080!1.30e-51!42;UBERON:0002346!1.46e-49!90;UBERON:0002020!4.47e-46!34;UBERON:0003528!4.47e-46!34;UBERON:0001893!4.71e-46!34;UBERON:0002791!3.85e-44!33;UBERON:0001869!6.97e-42!32;UBERON:0003056!1.32e-36!61;UBERON:0002619!1.38e-33!22;UBERON:0000033!8.07e-32!123;UBERON:0001950!9.48e-30!20;UBERON:0000153!1.16e-29!129;UBERON:0007811!1.16e-29!129;UBERON:0000956!5.58e-29!25;UBERON:0000203!5.58e-29!25;UBERON:0004121!3.47e-28!169;UBERON:0000924!3.69e-27!173;UBERON:0006601!3.69e-27!173;UBERON:0000025!2.40e-21!194;UBERON:0002308!3.13e-19!9;UBERON:0000125!3.13e-19!9;UBERON:0002420!7.10e-19!9;UBERON:0007245!7.10e-19!9;UBERON:0010009!7.10e-19!9;UBERON:0010011!7.10e-19!9;UBERON:0000454!7.10e-19!9;UBERON:0004111!1.61e-16!241;UBERON:0003076!3.36e-16!15;UBERON:0003057!3.36e-16!15;UBERON:0009663!3.50e-15!7;UBERON:0002298!1.07e-13!8;UBERON:0000477!1.95e-13!286;UBERON:0000475!3.93e-13!365;UBERON:0000200!4.47e-13!6;UBERON:0001871!7.19e-13!7;UBERON:0004732!1.13e-12!13;UBERON:0000483!2.42e-12!309;UBERON:0000119!4.60e-12!312;UBERON:0000349!3.60e-11!5;UBERON:0000064!4.90e-11!219;UBERON:0004733!7.07e-11!12;UBERON:0002028!7.07e-11!12;UBERON:0007277!7.07e-11!12;UBERON:0000062!1.15e-09!511;UBERON:0000481!4.45e-09!347;UBERON:0000369!7.16e-09!4;UBERON:0002435!7.16e-09!4;UBERON:0000204!7.16e-09!4;UBERON:0010082!7.16e-09!4;UBERON:0001894!2.20e-08!7;UBERON:0006222!2.20e-08!7;UBERON:0000922!2.93e-08!612;UBERON:0006331!6.66e-08!3;UBERON:0000988!9.46e-08!3;UBERON:0002240!1.18e-07!3;UBERON:0002771!1.18e-07!3;UBERON:0000923!1.23e-07!604;UBERON:0005291!1.23e-07!604;UBERON:0006598!1.23e-07!604;UBERON:0002532!1.23e-07!604;UBERON:0000467!1.28e-07!625;UBERON:0001896!1.31e-07!3;UBERON:0005290!1.31e-07!3;UBERON:0010096!1.31e-07!3;UBERON:0002050!1.38e-07!605;UBERON:0005423!1.38e-07!605;UBERON:0000480!1.43e-07!626;UBERON:0001872!1.64e-07!5;UBERON:0002021!2.17e-07!5;UBERON:0000468!5.01e-07!659;UBERON:0005383!5.96e-07!3;UBERON:0005382!5.96e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.57e-59;34!UBERON:0003528;2.98e-57;34!UBERON:0002020;2.98e-57;34!UBERON:0002780;3.03e-57;41!UBERON:0001890;3.03e-57;41!UBERON:0002791;5.46e-56;32!UBERON:0001869;8.93e-56;32!UBERON:0000073;8.11e-52;53!UBERON:0002616;8.11e-52;53!UBERON:0002619;1.85e-48;22!UBERON:0001950;2.09e-42;20!UBERON:0000956;2.77e-42;25!UBERON:0000203;2.77e-42;25!UBERON:0001017;7.72e-39;75!UBERON:0000955;1.47e-37;68!UBERON:0001016;1.76e-30;83!UBERON:0000125;8.40e-30;9!UBERON:0002308;8.40e-30;9!UBERON:0002420;4.01e-29;9!UBERON:0007245;4.01e-29;9!UBERON:0010009;4.01e-29;9!UBERON:0010011;4.01e-29;9!UBERON:0000454;4.01e-29;9!UBERON:0009663;2.62e-23;7!UBERON:0002298;5.96e-21;6!UBERON:0004732;4.17e-20;13!UBERON:0007023;3.68e-19;114!UBERON:0004733;3.36e-17;12!UBERON:0002028;3.36e-17;12!UBERON:0000349;9.35e-17;5!UBERON:0001871;1.13e-16;6!UBERON:0002784;6.69e-15;4!UBERON:0000200;1.97e-14;6!UBERON:0000369;3.19e-13;4!UBERON:0002435;3.19e-13;4!UBERON:0000204;3.19e-13;4!UBERON:0001894;7.13e-13;7!UBERON:0011216;9.74e-13;132!UBERON:0000988;1.90e-11;3!UBERON:0002240;2.59e-11;3!UBERON:0005174;2.59e-11;3!UBERON:0001137;2.59e-11;3!UBERON:0001872;2.62e-11;5!UBERON:0001896;3.08e-11;3!UBERON:0005290;3.08e-11;3!UBERON:0002021;3.85e-11;5!UBERON:0005383;3.42e-10;3!UBERON:0005382;3.42e-10;3!UBERON:0002680;2.66e-09;9!UBERON:0001895;2.66e-09;9!UBERON:0010314;4.37e-09;132!UBERON:0005162;2.02e-08;2!UBERON:0000122;2.02e-08;2!UBERON:0001875;2.25e-08;2!UBERON:0006514;2.25e-08;2!UBERON:0001905;2.46e-08;2!UBERON:0002757;2.46e-08;2!UBERON:0010134;2.46e-08;2!UBERON:0005408;2.46e-08;2!UBERON:0001899;2.46e-08;2!UBERON:0001897;2.93e-08;2!UBERON:0010225;2.93e-08;2!UBERON:0002148;3.32e-08;2!UBERON:0006331;3.32e-08;2!UBERON:0009662;3.32e-08;2!UBERON:0002771;4.78e-08;2!UBERON:0001954;6.75e-08;2!UBERON:0003022;6.75e-08;2!UBERON:0002421;6.75e-08;2!UBERON:0002600;6.75e-08;2!UBERON:0001876;1.63e-07;2!UBERON:0001873;2.23e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.85e-107,56;UBERON:0005068,1.85e-107,56;UBERON:0006241,1.85e-107,56;UBERON:0007135,1.85e-107,56;UBERON:0000073,7.88e-98,53;UBERON:0002616,7.88e-98,53;UBERON:0000955,4.69e-89,68;UBERON:0006238,4.69e-89,68;UBERON:0001017,1.27e-88,81;UBERON:0001016,1.32e-82,89;UBERON:0002780,3.14e-81,41;UBERON:0001890,3.14e-81,41;UBERON:0003080,3.14e-81,41;UBERON:0006240,3.14e-81,41;UBERON:0003075,1.36e-77,82;UBERON:0007284,1.36e-77,82;UBERON:0002346,1.62e-73,86;UBERON:0007023,8.99e-70,114;UBERON:0003528,2.10e-69,34;UBERON:0002020,2.10e-69,34;UBERON:0001893,2.28e-69,34;UBERON:0002791,4.65e-63,32;UBERON:0001869,9.49e-63,32;UBERON:0003056,2.85e-59,61;UBERON:0010371,5.17e-59,104;UBERON:0002619,1.70e-48,22;UBERON:0010314,1.58e-46,132;UBERON:0001950,1.96e-42,20;UBERON:0000956,2.58e-42,25;UBERON:0000203,2.58e-42,25;UBERON:0004121,4.97e-40,171;UBERON:0000924,4.97e-40,171;UBERON:0006601,4.97e-40,171;UBERON:0011216,7.01e-34,223;UBERON:0000125,9.15e-30,9;UBERON:0002308,9.15e-30,9;UBERON:0002420,3.40e-29,9;UBERON:0007245,3.40e-29,9;UBERON:0010009,3.40e-29,9;UBERON:0010011,3.40e-29,9;UBERON:0000454,3.40e-29,9;UBERON:0003076,8.53e-26,15;UBERON:0003057,8.53e-26,15;UBERON:0000025,1.32e-25,192;UBERON:0009663,2.75e-23,7;UBERON:0002298,6.61e-21,6;UBERON:0004111,1.51e-20,240;UBERON:0004732,4.17e-20,13;UBERON:0004733,3.37e-17,12;UBERON:0002028,3.37e-17,12;UBERON:0007277,3.37e-17,12;UBERON:0000349,7.05e-17,5;UBERON:0001871,1.04e-16,6;UBERON:0002784,6.46e-15,4;UBERON:0000200,2.06e-14,6;UBERON:0000483,7.44e-14,306;UBERON:0000119,1.29e-13,309;UBERON:0000369,3.24e-13,4;UBERON:0002435,3.24e-13,4;UBERON:0000204,3.24e-13,4;UBERON:0010082,3.24e-13,4;UBERON:0001894,7.04e-13,7;UBERON:0006222,7.04e-13,7;UBERON:0000988,1.96e-11,3;UBERON:0001872,2.69e-11,5;UBERON:0002240,2.78e-11,3;UBERON:0005174,2.78e-11,3;UBERON:0001137,2.78e-11,3;UBERON:0001896,3.30e-11,3;UBERON:0005290,3.30e-11,3;UBERON:0010096,3.30e-11,3;UBERON:0002021,4.23e-11,5;UBERON:0005383,3.65e-10,3;UBERON:0005382,3.65e-10,3;UBERON:0002680,2.56e-09,9;UBERON:0001895,2.56e-09,9;UBERON:0010092,2.56e-09,9;UBERON:0005162,2.02e-08,2;UBERON:0000122,2.02e-08,2;UBERON:0001905,2.33e-08,2;UBERON:0001875,2.33e-08,2;UBERON:0002757,2.33e-08,2;UBERON:0010134,2.33e-08,2;UBERON:0005408,2.33e-08,2;UBERON:0006514,2.33e-08,2;UBERON:0001899,2.33e-08,2;UBERON:0001897,2.99e-08,2;UBERON:0010225,2.99e-08,2;UBERON:0002148,3.44e-08,2;UBERON:0006331,3.44e-08,2;UBERON:0009662,3.44e-08,2;UBERON:0000923,4.61e-08,560;UBERON:0010316,4.61e-08,560;UBERON:0005291,4.61e-08,560;UBERON:0006598,4.61e-08,560;UBERON:0010317,4.61e-08,560;UBERON:0002532,4.61e-08,560;UBERON:0002771,5.04e-08,2;UBERON:0002050,6.46e-08,564;UBERON:0001954,6.64e-08,2;UBERON:0003022,6.64e-08,2;UBERON:0002421,6.64e-08,2;UBERON:0002600,6.64e-08,2;UBERON:0001876,1.31e-07,2;UBERON:0000922,1.52e-07,592;UBERON:0001873,2.23e-07,2;UBERON:0010122,2.23e-07,2;UBERON:0005423,2.57e-07,581 | |||
|phase1_expression=0,0,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,9.84685914873589,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,1.08507746200627,0,0,4.84666373047609,8.62743312905217,1.99613798001194,0,0,0,0,0,0,0,0,0,3.54296554325536,3.25610384288601,0,2.98564001814306,2.65992857058193,2.63262476584767,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,23.994803341121,0,12.416015623443,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,1.58186518546373,0,0,5.76128243198496,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,10.2071449080664,39.83946525757,0,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0.0846733320657845,4.77137813885582,15.390984890608,0,0,0,0,0,4.9207140893,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.43765581439319,21.5539140840585,0,0,0.854299300541557,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0.886068179966986,6.10131324509816,10.3908472486395,4.58727356552057,24.4043913381075,10.0596172765041,2.21357815897969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1440460828146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0,0,0,0,0,0,0,0,0,0,6.74406863512825,4.25089728976755,22.9872757042298,5.33302547025963,0,5.18679393481634,5.81312324274664,19.9877188362816,0,0,0,0,0,0,0,1.95546853708069,0,0,0,0,0,7.69928464649699,9.37293718336617,9.71427943555565,7.92697627423835,0,0,0,0,0,10.7140367175657,24.2124279997553,0,0,0.0887023701626388,0,0,10.2634296795016,6.18264071490781,0,0,0.863424021355654,2.19961825882403,0,0,0,0,1.6439605160631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,9.67476547359776,0,0.771741581079447,0,0,1.71603825227734,0,12.9563588295864,31.4869184346711,4.226557275834,0,0.281951753939561,0.580120991762195,0,0,0,0,0,0,59.4859270078523,0,6.32320858775507,0,0,0,0,0,0,0.874124575709564,0,0,0,0,0,0.530450887527676,0,8.29169439458779,49.7512710095716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0,0 | |||
|short_description=p5@CHN2 | |||
}} |
Latest revision as of 04:21, 18 September 2015
Short description: | p5@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHN2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 4bp_to_ENST00000493906_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data