FFCP PHASE1:Mm9::chr11:101329495..101329506,+: Difference between revisions
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{{FFCP|EntrezGene=11858|HGNC=|MCL_coexpression_id=556|UniProt=Q9QYM5|association_with_transcript=6bp_to_ENSMUST00000001347_5end|description=CAGE_peak_7_at_Rnd2_5end|id=chr11:101329495..101329506,+|ontology_enrichment_celltype=CL:0000540!6.93e-16!33;CL:0000047!6.93e-16!33;CL:0000031!6.93e-16!33;CL:0000404!6.93e-16!33;CL:0000221!9.65e-16!44;CL:0000133!9.65e-16!44;CL:0002319!4.93e-15!43;CL:0000117!2.21e-12!23;CL:0000337!2.21e-12!23;CL:0000055!4.69e-12!50;CL:0000393!1.51e-11!39;CL:0000211!1.51e-11!39;CL:0002321!4.09e-09!70;CL:0000220!4.09e-09!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.25e-26,23;CL:0000337,5.25e-26,23;CL:0000540,1.02e-22,33;CL:0000047,1.02e-22,33;CL:0000031,1.02e-22,33;CL:0000404,1.02e-22,33;CL:0000221,6.90e-21,44;CL:0000133,6.90e-21,44;CL:0002319,4.76e-19,43;CL:0000393,1.03e-18,39;CL:0000211,1.03e-18,39;CL:0002321,2.25e-13,70;CL:0002614,1.93e-11,3;CL:0000723,3.66e-08,91;CL:0000048,3.66e-08,91;CL:0002611,6.33e-08,2;CL:0000034,1.97e-07,97;CL:0000197,4.07e-07,2;CL:0002491,4.07e-07,2;CL:0000098,4.07e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.42e-21!73;UBERON:0005743!9.42e-21!73;UBERON:0000073!3.14e-20!75;UBERON:0001016!3.14e-20!75;UBERON:0004121!1.27e-15!102;UBERON:0000924!1.27e-15!102;UBERON:0006601!1.27e-15!102;UBERON:0001049!1.33e-13!52;UBERON:0005068!1.33e-13!52;UBERON:0006241!1.33e-13!52;UBERON:0007135!1.33e-13!52;UBERON:0002346!1.47e-12!71;UBERON:0003075!1.47e-12!71;UBERON:0007284!1.47e-12!71;UBERON:0002020!2.49e-11!34;UBERON:0000955!4.61e-11!50;UBERON:0006238!4.61e-11!50;UBERON:0000033!6.92e-11!63;UBERON:0002616!1.48e-10!49;UBERON:0003080!2.23e-09!40;UBERON:0003056!8.33e-09!49;UBERON:0002780!8.60e-09!39;UBERON:0001890!8.60e-09!39;UBERON:0006240!8.60e-09!39;UBERON:0002791!5.13e-08!29;UBERON:0003528!5.13e-08!29;UBERON:0001893!5.13e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.42e-21,73;UBERON:0001016,7.04e-21,75;UBERON:0000073,3.44e-18,54;UBERON:0004121,4.34e-17,95;UBERON:0000924,4.34e-17,95;UBERON:0006601,4.34e-17,95;UBERON:0001049,9.47e-17,52;UBERON:0005068,9.47e-17,52;UBERON:0006241,9.47e-17,52;UBERON:0007135,9.47e-17,52;UBERON:0010371,1.69e-15,73;UBERON:0002346,1.40e-14,64;UBERON:0003075,1.40e-14,64;UBERON:0007284,1.40e-14,64;UBERON:0002240,3.59e-14,6;UBERON:0005174,3.59e-14,6;UBERON:0001137,3.59e-14,6;UBERON:0002950,5.15e-14,4;UBERON:0001891,5.15e-14,4;UBERON:0009616,5.15e-14,4;UBERON:0010286,5.15e-14,4;UBERON:0003076,7.81e-13,12;UBERON:0003057,7.81e-13,12;UBERON:0002020,7.73e-12,34;UBERON:0002038,1.93e-11,3;UBERON:0009663,1.93e-11,3;UBERON:0009661,1.93e-11,3;UBERON:0000125,1.93e-11,3;UBERON:0002308,1.93e-11,3;UBERON:0010314,1.97e-11,92;UBERON:0001948,3.79e-11,5;UBERON:0002315,3.79e-11,5;UBERON:0002420,1.56e-10,8;UBERON:0007245,1.56e-10,8;UBERON:0010009,1.56e-10,8;UBERON:0010011,1.56e-10,8;UBERON:0000454,1.56e-10,8;UBERON:0002616,3.05e-09,46;UBERON:0000955,5.42e-09,47;UBERON:0006238,5.42e-09,47;UBERON:0002256,6.33e-08,2;UBERON:0003080,1.03e-07,40;UBERON:0001896,3.27e-07,2;UBERON:0002298,3.27e-07,2;UBERON:0005290,3.27e-07,2;UBERON:0010096,3.27e-07,2;UBERON:0004766,4.07e-07,2;UBERON:0008193,4.07e-07,2;UBERON:0005913,4.07e-07,2;UBERON:0011158,4.07e-07,2;UBERON:0005744,4.07e-07,2;UBERON:0003457,4.07e-07,2;UBERON:0008001,4.07e-07,2;UBERON:0007497,4.07e-07,2;UBERON:0009955,4.07e-07,2;UBERON:0003067,4.07e-07,2;UBERON:0002546,4.07e-07,2;UBERON:0007914,4.07e-07,2;UBERON:0005253,4.07e-07,2;UBERON:0002227,4.07e-07,2;UBERON:0001846,4.07e-07,2;UBERON:0004339,4.07e-07,2;UBERON:0002105,4.07e-07,2;UBERON:0001678,4.07e-07,2;UBERON:0003128,4.07e-07,2;UBERON:0001694,4.07e-07,2;UBERON:0004681,4.07e-07,2;UBERON:0001839,4.07e-07,2;UBERON:0001690,4.07e-07,2;UBERON:0001844,4.07e-07,2;UBERON:0001849,4.07e-07,2;UBERON:0002499,4.07e-07,2;UBERON:0001855,4.07e-07,2;UBERON:0011137,4.07e-07,2;UBERON:0001703,4.07e-07,2;UBERON:0010323,4.07e-07,2;UBERON:0003129,4.07e-07,2;UBERON:0003069,4.07e-07,2;UBERON:0003051,4.07e-07,2;UBERON:0004637,4.07e-07,2;UBERON:0004761,4.07e-07,2;UBERON:0010113,4.07e-07,2;UBERON:0009123,4.07e-07,2;UBERON:0010351,4.07e-07,2;UBERON:0009617,4.07e-07,2;UBERON:0005641,4.07e-07,2;UBERON:0010349,4.07e-07,2;UBERON:0011216,9.53e-07,194|phase1_expression=1.76163731815273,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0,2.53532561402472,0,0.889294796111139,0.899899717281399,0,0,0.599200221036809,2.30530983192933,1.34796496001021,1.75507719831198,2.10324961351382,4.57041575046086,2.20868540951614,0.367472397644862,0.958454710182364,0,0,3.70293280447044,3.07213066512487,0.527545150920775,1.46380229763855,0.52091337055676,4.4669279840221,3.93933827022176,3.36156145108982,2.06240009831567,2.70506193518296,0.559198337475902,0.075726193333184,0,0,0.860423876981386,0,0,0.649776417447669,0,0,0.340860645156116,0,0,1.54927761754349,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0.83778682725382,0.255457055208591,0,0,0,1.3481157546434,2.28750301409313,0.125654352112864,0.695297280769106,0.255715457330331,1.66230435647648,1.29793010454206,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.468508622798644,0,0,0,0,0,0.278047249225598,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.60550589987792,1.87538698547525,0.327869890753351,0,1.57754109708128,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0.790575555893047,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0,0,0.238744688006273,0,0,2.96680483216816,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0,1.04661582230785,0.66183396182839,0,0.645799117388655,0.168956125490778,0.234714477291508,0.781226309063701,0.419437377702843,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0.564751842617067,0,0,0.515559547031063,0,0.755393897389701,0,0,0.906284817968409,0,0.518936737920883,0,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.114870937911227,0,0,0.77163688185482,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0.249810577937946,0.467863216890817,0,0,0.441182838239031,0|short_description=p7@Rnd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11858 | |||
|HGNC= | |||
|MCL_coexpression_id=556 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QYM5 | |||
|association_with_transcript=6bp_to_ENSMUST00000001347_5end | |||
|cluster_id=chr11:101329495..101329506,+ | |||
|description=CAGE_peak_7_at_Rnd2_5end | |||
|id=chr11:101329495..101329506,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.93e-16!33;CL:0000047!6.93e-16!33;CL:0000031!6.93e-16!33;CL:0000404!6.93e-16!33;CL:0000221!9.65e-16!44;CL:0000133!9.65e-16!44;CL:0002319!4.93e-15!43;CL:0000117!2.21e-12!23;CL:0000337!2.21e-12!23;CL:0000055!4.69e-12!50;CL:0000393!1.51e-11!39;CL:0000211!1.51e-11!39;CL:0002321!4.09e-09!70;CL:0000220!4.09e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.25e-26,23;CL:0000337,5.25e-26,23;CL:0000540,1.02e-22,33;CL:0000047,1.02e-22,33;CL:0000031,1.02e-22,33;CL:0000404,1.02e-22,33;CL:0000221,6.90e-21,44;CL:0000133,6.90e-21,44;CL:0002319,4.76e-19,43;CL:0000393,1.03e-18,39;CL:0000211,1.03e-18,39;CL:0002321,2.25e-13,70;CL:0002614,1.93e-11,3;CL:0000723,3.66e-08,91;CL:0000048,3.66e-08,91;CL:0002611,6.33e-08,2;CL:0000034,1.97e-07,97;CL:0000197,4.07e-07,2;CL:0002491,4.07e-07,2;CL:0000098,4.07e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.42e-21!73;UBERON:0005743!9.42e-21!73;UBERON:0000073!3.14e-20!75;UBERON:0001016!3.14e-20!75;UBERON:0004121!1.27e-15!102;UBERON:0000924!1.27e-15!102;UBERON:0006601!1.27e-15!102;UBERON:0001049!1.33e-13!52;UBERON:0005068!1.33e-13!52;UBERON:0006241!1.33e-13!52;UBERON:0007135!1.33e-13!52;UBERON:0002346!1.47e-12!71;UBERON:0003075!1.47e-12!71;UBERON:0007284!1.47e-12!71;UBERON:0002020!2.49e-11!34;UBERON:0000955!4.61e-11!50;UBERON:0006238!4.61e-11!50;UBERON:0000033!6.92e-11!63;UBERON:0002616!1.48e-10!49;UBERON:0003080!2.23e-09!40;UBERON:0003056!8.33e-09!49;UBERON:0002780!8.60e-09!39;UBERON:0001890!8.60e-09!39;UBERON:0006240!8.60e-09!39;UBERON:0002791!5.13e-08!29;UBERON:0003528!5.13e-08!29;UBERON:0001893!5.13e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.42e-21,73;UBERON:0001016,7.04e-21,75;UBERON:0000073,3.44e-18,54;UBERON:0004121,4.34e-17,95;UBERON:0000924,4.34e-17,95;UBERON:0006601,4.34e-17,95;UBERON:0001049,9.47e-17,52;UBERON:0005068,9.47e-17,52;UBERON:0006241,9.47e-17,52;UBERON:0007135,9.47e-17,52;UBERON:0010371,1.69e-15,73;UBERON:0002346,1.40e-14,64;UBERON:0003075,1.40e-14,64;UBERON:0007284,1.40e-14,64;UBERON:0002240,3.59e-14,6;UBERON:0005174,3.59e-14,6;UBERON:0001137,3.59e-14,6;UBERON:0002950,5.15e-14,4;UBERON:0001891,5.15e-14,4;UBERON:0009616,5.15e-14,4;UBERON:0010286,5.15e-14,4;UBERON:0003076,7.81e-13,12;UBERON:0003057,7.81e-13,12;UBERON:0002020,7.73e-12,34;UBERON:0002038,1.93e-11,3;UBERON:0009663,1.93e-11,3;UBERON:0009661,1.93e-11,3;UBERON:0000125,1.93e-11,3;UBERON:0002308,1.93e-11,3;UBERON:0010314,1.97e-11,92;UBERON:0001948,3.79e-11,5;UBERON:0002315,3.79e-11,5;UBERON:0002420,1.56e-10,8;UBERON:0007245,1.56e-10,8;UBERON:0010009,1.56e-10,8;UBERON:0010011,1.56e-10,8;UBERON:0000454,1.56e-10,8;UBERON:0002616,3.05e-09,46;UBERON:0000955,5.42e-09,47;UBERON:0006238,5.42e-09,47;UBERON:0002256,6.33e-08,2;UBERON:0003080,1.03e-07,40;UBERON:0001896,3.27e-07,2;UBERON:0002298,3.27e-07,2;UBERON:0005290,3.27e-07,2;UBERON:0010096,3.27e-07,2;UBERON:0004766,4.07e-07,2;UBERON:0008193,4.07e-07,2;UBERON:0005913,4.07e-07,2;UBERON:0011158,4.07e-07,2;UBERON:0005744,4.07e-07,2;UBERON:0003457,4.07e-07,2;UBERON:0008001,4.07e-07,2;UBERON:0007497,4.07e-07,2;UBERON:0009955,4.07e-07,2;UBERON:0003067,4.07e-07,2;UBERON:0002546,4.07e-07,2;UBERON:0007914,4.07e-07,2;UBERON:0005253,4.07e-07,2;UBERON:0002227,4.07e-07,2;UBERON:0001846,4.07e-07,2;UBERON:0004339,4.07e-07,2;UBERON:0002105,4.07e-07,2;UBERON:0001678,4.07e-07,2;UBERON:0003128,4.07e-07,2;UBERON:0001694,4.07e-07,2;UBERON:0004681,4.07e-07,2;UBERON:0001839,4.07e-07,2;UBERON:0001690,4.07e-07,2;UBERON:0001844,4.07e-07,2;UBERON:0001849,4.07e-07,2;UBERON:0002499,4.07e-07,2;UBERON:0001855,4.07e-07,2;UBERON:0011137,4.07e-07,2;UBERON:0001703,4.07e-07,2;UBERON:0010323,4.07e-07,2;UBERON:0003129,4.07e-07,2;UBERON:0003069,4.07e-07,2;UBERON:0003051,4.07e-07,2;UBERON:0004637,4.07e-07,2;UBERON:0004761,4.07e-07,2;UBERON:0010113,4.07e-07,2;UBERON:0009123,4.07e-07,2;UBERON:0010351,4.07e-07,2;UBERON:0009617,4.07e-07,2;UBERON:0005641,4.07e-07,2;UBERON:0010349,4.07e-07,2;UBERON:0011216,9.53e-07,194 | |||
|phase1_expression=1.76163731815273,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0,2.53532561402472,0,0.889294796111139,0.899899717281399,0,0,0.599200221036809,2.30530983192933,1.34796496001021,1.75507719831198,2.10324961351382,4.57041575046086,2.20868540951614,0.367472397644862,0.958454710182364,0,0,3.70293280447044,3.07213066512487,0.527545150920775,1.46380229763855,0.52091337055676,4.4669279840221,3.93933827022176,3.36156145108982,2.06240009831567,2.70506193518296,0.559198337475902,0.075726193333184,0,0,0.860423876981386,0,0,0.649776417447669,0,0,0.340860645156116,0,0,1.54927761754349,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0.83778682725382,0.255457055208591,0,0,0,1.3481157546434,2.28750301409313,0.125654352112864,0.695297280769106,0.255715457330331,1.66230435647648,1.29793010454206,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.468508622798644,0,0,0,0,0,0.278047249225598,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.60550589987792,1.87538698547525,0.327869890753351,0,1.57754109708128,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0.790575555893047,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0,0,0.238744688006273,0,0,2.96680483216816,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0,1.04661582230785,0.66183396182839,0,0.645799117388655,0.168956125490778,0.234714477291508,0.781226309063701,0.419437377702843,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0.564751842617067,0,0,0.515559547031063,0,0.755393897389701,0,0,0.906284817968409,0,0.518936737920883,0,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.114870937911227,0,0,0.77163688185482,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0.249810577937946,0.467863216890817,0,0,0.441182838239031,0 | |||
|short_description=p7@Rnd2 | |||
}} |
Revision as of 04:35, 5 August 2015
Short description: | p7@Rnd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rnd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:556 |
Association with transcript: | 6bp_to_ENSMUST00000001347_5end |
EntrezGene: | 11858 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.25e-26 | 23 |
neuroblast (sensu Vertebrata) | 5.25e-26 | 23 |
neuron | 1.02e-22 | 33 |
neuronal stem cell | 1.02e-22 | 33 |
neuroblast | 1.02e-22 | 33 |
electrically signaling cell | 1.02e-22 | 33 |
ectodermal cell | 6.90e-21 | 44 |
neurectodermal cell | 6.90e-21 | 44 |
neural cell | 4.76e-19 | 43 |
electrically responsive cell | 1.03e-18 | 39 |
electrically active cell | 1.03e-18 | 39 |
embryonic cell | 2.25e-13 | 70 |
neuron of the substantia nigra | 1.93e-11 | 3 |
somatic stem cell | 3.66e-08 | 91 |
multi fate stem cell | 3.66e-08 | 91 |
neuron of the dorsal spinal cord | 6.33e-08 | 2 |
stem cell | 1.97e-07 | 97 |
receptor cell | 4.07e-07 | 2 |
auditory epithelial cell | 4.07e-07 | 2 |
sensory epithelial cell | 4.07e-07 | 2 |