FFCP PHASE1:Hg19::chr19:15090628..15090648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6511 | |EntrezGene=6511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10944 | |HGNC=10944 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N753 | |UniProt=Q8N753 | ||
|association_with_transcript=-123bp_to_uc002nab.2,uc002nac.2_5end | |association_with_transcript=-123bp_to_uc002nab.2,uc002nac.2_5end | ||
|cluster_id=chr19:15090628..15090648,- | |||
|description=CAGE_peak_3_at_SLC1A6_5end | |description=CAGE_peak_3_at_SLC1A6_5end | ||
|id=chr19:15090628..15090648,- | |id=chr19:15090628..15090648,- | ||
|ontology_enrichment_celltype=CL:0000349;1.00e-19;19!CL:0002322;2.69e-19;5!CL:0002577;2.49e-13;3!CL:0000540;6.85e-10;6!CL:0000404;6.85e-10;6!CL:0002321;8.33e-09;15!CL:0002536;1.74e-08;2!CL:0002537;4.24e-08;5 | |ontology_enrichment_celltype=CL:0002322!2.14e-10!5;CL:0000244!6.84e-08!4;CL:0000731!6.84e-08!4;CL:0000540!7.17e-08!6;CL:0000031!7.17e-08!6;CL:0000404!7.17e-08!6;CL:0000349!1.80e-07!3;CL:0002577!1.80e-07!3;CL:0002541!9.85e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;1.00e-19;19!CL:0002322;2.69e-19;5!CL:0002577;2.49e-13;3!CL:0000540;6.85e-10;6!CL:0000404;6.85e-10;6!CL:0002321;8.33e-09;15!CL:0002536;1.74e-08;2!CL:0002537;4.24e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.58e-20,19;CL:0002322,3.60e-19,5;CL:0002577,2.40e-13,3;CL:0000540,5.79e-10,6;CL:0000031,5.79e-10,6;CL:0000404,5.79e-10,6;CL:0002536,1.25e-08,2;CL:0002537,4.35e-08,5;CL:0000047,1.72e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.66e-13;3!CL:0000031;6.85e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002791;5.83e-20;32!UBERON:0001869;2.32e-19;32!UBERON:0005631;3.84e-19;10!UBERON:0000158;3.84e-19;10!UBERON:0000478;3.19e-18;24!UBERON:0003528;7.43e-18;34!UBERON:0002020;7.43e-18;34!UBERON:0002619;2.43e-17;22!UBERON:0001893;4.73e-17;34!UBERON:0001987;1.44e-16;4!UBERON:0001950;7.24e-16;20!UBERON:0002780;2.50e-15;41!UBERON:0001890;2.50e-15;41!UBERON:0000956;4.43e-15;25!UBERON:0000203;4.43e-15;25!UBERON:0000305;3.42e-14;7!UBERON:0000073;1.08e-13;53!UBERON:0002616;1.08e-13;53!UBERON:0000955;3.05e-11;68!UBERON:0001017;8.46e-11;75!UBERON:0001016;2.20e-10;83!UBERON:0000369;5.21e-09;4!UBERON:0002435;5.21e-09;4!UBERON:0000204;5.21e-09;4!UBERON:0009663;1.11e-08;7!UBERON:0002021;2.52e-07;5!UBERON:0001872;3.11e-07;5!UBERON:0002680;3.16e-07;9!UBERON:0001895;3.16e-07;9!UBERON:0002420;9.16e-07;9!UBERON:0000125;9.16e-07;9!UBERON:0007245;9.16e-07;9!UBERON:0002308;9.16e-07;9!UBERON:0010009;9.16e-07;9!UBERON:0010011;9.16e-07;9!UBERON:0000454;9.16e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.63e-48!86;UBERON:0001017!2.53e-47!82;UBERON:0001049!7.39e-47!57;UBERON:0005068!7.39e-47!57;UBERON:0006241!7.39e-47!57;UBERON:0007135!7.39e-47!57;UBERON:0000073!2.32e-44!94;UBERON:0001016!2.32e-44!94;UBERON:0002616!3.08e-40!59;UBERON:0000955!5.27e-40!69;UBERON:0006238!5.27e-40!69;UBERON:0001893!2.15e-39!34;UBERON:0002020!2.32e-39!34;UBERON:0003528!2.32e-39!34;UBERON:0002791!7.24e-38!33;UBERON:0001869!5.95e-37!32;UBERON:0003075!1.98e-36!86;UBERON:0007284!1.98e-36!86;UBERON:0002780!4.95e-36!41;UBERON:0001890!4.95e-36!41;UBERON:0006240!4.95e-36!41;UBERON:0003080!5.89e-35!42;UBERON:0002346!3.56e-34!90;UBERON:0004121!1.12e-31!169;UBERON:0002619!1.59e-30!22;UBERON:0000924!1.62e-30!173;UBERON:0006601!1.62e-30!173;UBERON:0003056!1.29e-27!61;UBERON:0001950!1.99e-27!20;UBERON:0000956!3.02e-26!25;UBERON:0000203!3.02e-26!25;UBERON:0000033!3.54e-21!123;UBERON:0007023!1.40e-20!115;UBERON:0000153!1.44e-19!129;UBERON:0007811!1.44e-19!129;UBERON:0005631!1.72e-19!14;UBERON:0000158!1.72e-19!14;UBERON:0002420!4.29e-15!9;UBERON:0007245!4.29e-15!9;UBERON:0010009!4.29e-15!9;UBERON:0010011!4.29e-15!9;UBERON:0000454!4.29e-15!9;UBERON:0002308!8.81e-15!9;UBERON:0000125!8.81e-15!9;UBERON:0003124!3.79e-14!7;UBERON:0003076!1.14e-12!15;UBERON:0003057!1.14e-12!15;UBERON:0000064!1.52e-12!219;UBERON:0009663!4.00e-12!7;UBERON:0000478!1.70e-11!24;UBERON:0004733!4.49e-11!12;UBERON:0002028!4.49e-11!12;UBERON:0007277!4.49e-11!12;UBERON:0001871!2.66e-10!7;UBERON:0000200!2.81e-10!6;UBERON:0004732!4.53e-10!13;UBERON:0001872!1.27e-09!5;UBERON:0002680!1.68e-09!9;UBERON:0001895!1.68e-09!9;UBERON:0010092!1.68e-09!9;UBERON:0000349!2.72e-09!5;UBERON:0001987!4.42e-09!4;UBERON:0004340!4.42e-09!4;UBERON:0000369!3.33e-08!4;UBERON:0002435!3.33e-08!4;UBERON:0000204!3.33e-08!4;UBERON:0010082!3.33e-08!4;UBERON:0000305!1.43e-07!7;UBERON:0002298!3.07e-07!8;UBERON:0000025!4.33e-07!194;UBERON:0000483!6.43e-07!309;UBERON:0000476!9.85e-07!3;UBERON:0000920!9.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;5.83e-20;32!UBERON:0001869;2.32e-19;32!UBERON:0005631;3.84e-19;10!UBERON:0000158;3.84e-19;10!UBERON:0000478;3.19e-18;24!UBERON:0003528;7.43e-18;34!UBERON:0002020;7.43e-18;34!UBERON:0002619;2.43e-17;22!UBERON:0001893;4.73e-17;34!UBERON:0001987;1.44e-16;4!UBERON:0001950;7.24e-16;20!UBERON:0002780;2.50e-15;41!UBERON:0001890;2.50e-15;41!UBERON:0000956;4.43e-15;25!UBERON:0000203;4.43e-15;25!UBERON:0000305;3.42e-14;7!UBERON:0000073;1.08e-13;53!UBERON:0002616;1.08e-13;53!UBERON:0000955;3.05e-11;68!UBERON:0001017;8.46e-11;75!UBERON:0001016;2.20e-10;83!UBERON:0000369;5.21e-09;4!UBERON:0002435;5.21e-09;4!UBERON:0000204;5.21e-09;4!UBERON:0009663;1.11e-08;7!UBERON:0002021;2.52e-07;5!UBERON:0001872;3.11e-07;5!UBERON:0002680;3.16e-07;9!UBERON:0001895;3.16e-07;9!UBERON:0002420;9.16e-07;9!UBERON:0000125;9.16e-07;9!UBERON:0007245;9.16e-07;9!UBERON:0002308;9.16e-07;9!UBERON:0010009;9.16e-07;9!UBERON:0010011;9.16e-07;9!UBERON:0000454;9.16e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.59e-33,14;UBERON:0000158,4.59e-33,14;UBERON:0001017,4.39e-26,81;UBERON:0001016,5.58e-25,89;UBERON:0001049,1.08e-23,56;UBERON:0005068,1.08e-23,56;UBERON:0006241,1.08e-23,56;UBERON:0007135,1.08e-23,56;UBERON:0000073,9.63e-23,53;UBERON:0002616,9.63e-23,53;UBERON:0002791,1.00e-21,32;UBERON:0001869,1.00e-21,32;UBERON:0003124,9.06e-21,7;UBERON:0003528,2.77e-20,34;UBERON:0002020,2.77e-20,34;UBERON:0001893,2.77e-20,34;UBERON:0002780,1.08e-18,41;UBERON:0001890,1.08e-18,41;UBERON:0003080,1.08e-18,41;UBERON:0006240,1.08e-18,41;UBERON:0000955,1.86e-18,68;UBERON:0006238,1.86e-18,68;UBERON:0004121,1.91e-18,171;UBERON:0000924,1.91e-18,171;UBERON:0006601,1.91e-18,171;UBERON:0000478,2.89e-18,24;UBERON:0002619,2.84e-17,22;UBERON:0001987,1.51e-16,4;UBERON:0004340,1.51e-16,4;UBERON:0001950,8.91e-16,20;UBERON:0000956,5.08e-15,25;UBERON:0000203,5.08e-15,25;UBERON:0003075,1.11e-14,82;UBERON:0007284,1.11e-14,82;UBERON:0000305,2.79e-14,7;UBERON:0002346,8.92e-14,86;UBERON:0010371,2.87e-13,104;UBERON:0004871,1.87e-12,8;UBERON:0003056,1.74e-11,61;UBERON:0007023,2.90e-09,114;UBERON:0000369,5.29e-09,4;UBERON:0002435,5.29e-09,4;UBERON:0000204,5.29e-09,4;UBERON:0010082,5.29e-09,4;UBERON:0009663,1.22e-08,7;UBERON:0010314,2.25e-07,132;UBERON:0001872,2.42e-07,5;UBERON:0002021,3.15e-07,5;UBERON:0002680,3.47e-07,9;UBERON:0001895,3.47e-07,9;UBERON:0010092,3.47e-07,9;UBERON:0011216,5.21e-07,223;UBERON:0002420,9.85e-07,9;UBERON:0000125,9.85e-07,9;UBERON:0007245,9.85e-07,9;UBERON:0002308,9.85e-07,9;UBERON:0010009,9.85e-07,9;UBERON:0010011,9.85e-07,9;UBERON:0000454,9.85e-07,9 | |||
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|short_description=p3@SLC1A6 | |short_description=p3@SLC1A6 | ||
}} | }} |
Latest revision as of 06:35, 16 September 2015
Short description: | p3@SLC1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC1A6_5end |
Coexpression cluster: | NA |
Association with transcript: | -123bp_to_uc002nab.2, uc002nac.2_5end |
EntrezGene: | SLC1A6 |
HGNC: | 10944 |
UniProt: | Q8N753 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.58e-20 | 19 |
embryonic stem cell | 3.60e-19 | 5 |
placental epithelial cell | 2.40e-13 | 3 |
neuron | 5.79e-10 | 6 |
neuroblast | 5.79e-10 | 6 |
electrically signaling cell | 5.79e-10 | 6 |
amniotic epithelial cell | 1.25e-08 | 2 |
amnion mesenchymal stem cell | 4.35e-08 | 5 |
neuronal stem cell | 1.72e-07 | 8 |