FFCP PHASE1:Hg19::chr5:11588907..11588967,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1501|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2516|TSSclassifier=S|UniProt=B4DRK2,D6RF55|association_with_transcript=0bp_to_ENST00000503622,ENST00000504354,ENST00000513598,uc010itt.2,uc011cmy.1_5end|coexpression_cluster_id=C4|description=CAGE_peak_3_at_CTNND2_5end|id=chr5:11588907..11588967,-|ontology_enrichment_celltype=CL:0000047!2.68e-08!8;CL:0000128!4.68e-07!7;CL:0000126!4.68e-07!7;CL:0000127!4.68e-07!7;CL:0002453!4.68e-07!7;CL:0002605!9.05e-07!3|ontology_enrichment_celltype_v019=CL:0000128;8.67e-09;7!CL:0000126;8.67e-09;7!CL:0000127;8.67e-09;7!CL:0002605;2.98e-08;3|ontology_enrichment_celltype_v019_2=CL:0000128,8.99e-09,7;CL:0000126,8.99e-09,7;CL:0000127,8.99e-09,7;CL:0002453,8.99e-09,7;CL:0002605,3.18e-08,3|ontology_enrichment_development_v019=UBERON:0006601;1.01e-22;82!UBERON:0006241;4.93e-09;3!UBERON:0003057;4.93e-09;3!UBERON:0006215;1.04e-08;3!UBERON:0010122;7.12e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.36e-110!57;UBERON:0005068!4.36e-110!57;UBERON:0006241!4.36e-110!57;UBERON:0007135!4.36e-110!57;UBERON:0001017!3.25e-104!82;UBERON:0005743!1.04e-101!86;UBERON:0000073!1.91e-96!94;UBERON:0001016!1.91e-96!94;UBERON:0002616!9.29e-94!59;UBERON:0000955!9.59e-87!69;UBERON:0006238!9.59e-87!69;UBERON:0002780!7.99e-86!41;UBERON:0001890!7.99e-86!41;UBERON:0006240!7.99e-86!41;UBERON:0003075!4.50e-84!86;UBERON:0007284!4.50e-84!86;UBERON:0003080!1.64e-83!42;UBERON:0002346!2.59e-82!90;UBERON:0001893!4.59e-72!34;UBERON:0002020!5.36e-72!34;UBERON:0003528!5.36e-72!34;UBERON:0002791!5.58e-70!33;UBERON:0001869!1.51e-67!32;UBERON:0003056!6.70e-65!61;UBERON:0007023!9.12e-53!115;UBERON:0000956!1.28e-52!25;UBERON:0000203!1.28e-52!25;UBERON:0000033!2.82e-51!123;UBERON:0000924!9.14e-51!173;UBERON:0006601!9.14e-51!173;UBERON:0004121!9.57e-51!169;UBERON:0000153!4.07e-48!129;UBERON:0007811!4.07e-48!129;UBERON:0002619!2.22e-47!22;UBERON:0001950!6.72e-43!20;UBERON:0003076!4.72e-26!15;UBERON:0003057!4.72e-26!15;UBERON:0000025!3.08e-23!194;UBERON:0004732!3.87e-22!13;UBERON:0002420!2.35e-20!9;UBERON:0007245!2.35e-20!9;UBERON:0010009!2.35e-20!9;UBERON:0010011!2.35e-20!9;UBERON:0000454!2.35e-20!9;UBERON:0004733!2.48e-20!12;UBERON:0002028!2.48e-20!12;UBERON:0007277!2.48e-20!12;UBERON:0002308!2.51e-20!9;UBERON:0000125!2.51e-20!9;UBERON:0001871!1.55e-17!7;UBERON:0009663!3.50e-16!7;UBERON:0004111!1.21e-15!241;UBERON:0000064!2.37e-15!219;UBERON:0001894!1.20e-14!7;UBERON:0006222!1.20e-14!7;UBERON:0002680!2.18e-14!9;UBERON:0001895!2.18e-14!9;UBERON:0010092!2.18e-14!9;UBERON:0002298!1.11e-13!8;UBERON:0000200!1.22e-13!6;UBERON:0000477!1.76e-13!286;UBERON:0000483!1.47e-12!309;UBERON:0000349!1.90e-12!5;UBERON:0000119!2.78e-12!312;UBERON:0001872!2.92e-11!5;UBERON:0002021!3.18e-11!5;UBERON:0000475!1.86e-10!365;UBERON:0000369!6.85e-10!4;UBERON:0002435!6.85e-10!4;UBERON:0000204!6.85e-10!4;UBERON:0010082!6.85e-10!4;UBERON:0002037!1.34e-08!6;UBERON:0006215!1.34e-08!6;UBERON:0000922!1.96e-08!612;UBERON:0000481!2.41e-08!347;UBERON:0003296!2.60e-08!4;UBERON:0010133!2.60e-08!4;UBERON:0006331!6.43e-08!3;UBERON:0002771!6.73e-08!3;UBERON:0001896!9.83e-08!3;UBERON:0005290!9.83e-08!3;UBERON:0010096!9.83e-08!3;UBERON:0005383!1.05e-07!3;UBERON:0005382!1.05e-07!3;UBERON:0000988!1.12e-07!3;UBERON:0000062!1.37e-07!511;UBERON:0002240!2.07e-07!3;UBERON:0002050!3.07e-07!605;UBERON:0005423!3.07e-07!605;UBERON:0000923!8.07e-07!604;UBERON:0005291!8.07e-07!604;UBERON:0006598!8.07e-07!604;UBERON:0002532!8.07e-07!604|ontology_enrichment_uberon_v019=UBERON:0001893;1.55e-78;34!UBERON:0003528;2.50e-78;34!UBERON:0002020;2.50e-78;34!UBERON:0002791;3.85e-78;32!UBERON:0001869;5.85e-78;32!UBERON:0002780;6.26e-78;41!UBERON:0001890;6.26e-78;41!UBERON:0000073;1.00e-75;53!UBERON:0002616;1.00e-75;53!UBERON:0000956;6.04e-67;25!UBERON:0000203;6.04e-67;25!UBERON:0002619;3.38e-60;22!UBERON:0001950;1.91e-54;20!UBERON:0000955;1.40e-50;68!UBERON:0001017;1.70e-48;75!UBERON:0001016;2.36e-43;83!UBERON:0004732;5.63e-28;13!UBERON:0004733;1.15e-25;12!UBERON:0002028;1.15e-25;12!UBERON:0002420;1.39e-25;9!UBERON:0007245;1.39e-25;9!UBERON:0010009;1.39e-25;9!UBERON:0010011;1.39e-25;9!UBERON:0000454;1.39e-25;9!UBERON:0000125;1.51e-25;9!UBERON:0002308;1.51e-25;9!UBERON:0009663;2.93e-20;7!UBERON:0001871;3.25e-19;6!UBERON:0001894;2.47e-18;7!UBERON:0002680;4.71e-18;9!UBERON:0001895;4.71e-18;9!UBERON:0002298;4.15e-17;6!UBERON:0000200;5.26e-17;6!UBERON:0007023;1.15e-16;114!UBERON:0000349;1.93e-15;5!UBERON:0011216;1.69e-14;132!UBERON:0001872;6.15e-14;5!UBERON:0002021;6.76e-14;5!UBERON:0000369;3.38e-12;4!UBERON:0002435;3.38e-12;4!UBERON:0000204;3.38e-12;4!UBERON:0002784;1.55e-11;4!UBERON:0010314;7.71e-11;132!UBERON:0002037;1.15e-10;6!UBERON:0003296;3.19e-10;4!UBERON:0010133;3.19e-10;4!UBERON:0001870;1.61e-09;3!UBERON:0001896;1.88e-09;3!UBERON:0005290;1.88e-09;3!UBERON:0005383;1.99e-09;3!UBERON:0005382;1.99e-09;3!UBERON:0000988;2.32e-0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1501 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2516 | |||
|TSSclassifier=S | |||
|UniProt=B4DRK2,D6RF55 | |||
|association_with_transcript=0bp_to_ENST00000503622,ENST00000504354,ENST00000513598,uc010itt.2,uc011cmy.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_CTNND2_5end | |||
|id=chr5:11588907..11588967,- | |||
|ontology_enrichment_celltype=CL:0000047!2.68e-08!8;CL:0000128!4.68e-07!7;CL:0000126!4.68e-07!7;CL:0000127!4.68e-07!7;CL:0002453!4.68e-07!7;CL:0002605!9.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000128;8.67e-09;7!CL:0000126;8.67e-09;7!CL:0000127;8.67e-09;7!CL:0002605;2.98e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.99e-09,7;CL:0000126,8.99e-09,7;CL:0000127,8.99e-09,7;CL:0002453,8.99e-09,7;CL:0002605,3.18e-08,3 | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@CTNND2 | |||
}} |
Revision as of 12:46, 13 September 2013
Short description: | p3@CTNND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CTNND2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000503622, ENST00000504354, ENST00000513598, uc010itt.2, uc011cmy.1_5end |
EntrezGene: | CTNND2 |
HGNC: | 2516 |
UniProt: | B4DRK2D6RF55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.99e-09 | 7 |
macroglial cell | 8.99e-09 | 7 |
astrocyte | 8.99e-09 | 7 |
oligodendrocyte precursor cell | 8.99e-09 | 7 |
astrocyte of the cerebral cortex | 3.18e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.